RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 MAP3K19Q56UN5 1328 aa12.7□□□□□ -0.38
SNF8-211ENST00000512243 TTC24A2A3L6 582 aaPredicted RBP12.7□□□□□ -0.38
SNF8-211ENST00000512243 ANP32CO43423 234 aa12.7□□□□□ -0.38
SNF8-211ENST00000512243 AMPHP49418 695 aa12.7□□□□□ -0.38
SNF8-211ENST00000512243 CHRNA2Q15822 529 aa12.7□□□□□ -0.38
SNF8-211ENST00000512243 QPCTQ16769 361 aa12.7□□□□□ -0.38
SNF8-211ENST00000512243 C8orf37Q96NL8 207 aa12.7□□□□□ -0.38
SNF8-211ENST00000512243 KDM4CQ9H3R0 1056 aa12.7□□□□□ -0.38
SNF8-211ENST00000512243 FLT4P35916 1363 aa12.69□□□□□ -0.38
SNF8-211ENST00000512243 FBLN1P23142 703 aa12.69□□□□□ -0.38
SNF8-211ENST00000512243 POLR3EQ9NVU0 708 aa12.69□□□□□ -0.38
SNF8-211ENST00000512243 EMILIN1Q9Y6C2 1016 aa12.69□□□□□ -0.38
SNF8-211ENST00000512243 BLMP54132 1417 aaPredicted RBP12.69□□□□□ -0.38
SNF8-211ENST00000512243 SLIT2O94813 1529 aa12.68□□□□□ -0.38
SNF8-211ENST00000512243 PPM1GO15355 546 aaPredicted RBP12.68□□□□□ -0.38
SNF8-211ENST00000512243 ST8SIA5O15466 376 aa12.68□□□□□ -0.38
SNF8-211ENST00000512243 RC3H1Q5TC82 1133 aaKnown RBP12.68□□□□□ -0.38
SNF8-211ENST00000512243 PRPF38BQ5VTL8 546 aaKnown RBP12.68□□□□□ -0.38
SNF8-211ENST00000512243 DIEXFQ68CQ4 756 aaKnown RBP12.68□□□□□ -0.38
SNF8-211ENST00000512243 DESI1Q6ICB0 168 aa12.68□□□□□ -0.38
SNF8-211ENST00000512243 TSC1Q92574 1164 aa12.68□□□□□ -0.38
SNF8-211ENST00000512243 NGLY1Q96IV0 654 aa12.68□□□□□ -0.38
SNF8-211ENST00000512243 PRKRIP1Q9H875 184 aaPredicted RBP12.68□□□□□ -0.38
SNF8-211ENST00000512243 POLKQ9UBT6 870 aa12.68□□□□□ -0.38
SNF8-211ENST00000512243 RGPD2P0DJD1 1756 aa12.68□□□□□ -0.38
SNF8-211ENST00000512243 CAMTA1Q9Y6Y1 1673 aa12.67□□□□□ -0.38
SNF8-211ENST00000512243 MYBBP1AQ9BQG0 1328 aaKnown RBP12.67□□□□□ -0.38
SNF8-211ENST00000512243 COL5A2P05997 1499 aaPredicted RBP12.67□□□□□ -0.38
SNF8-211ENST00000512243 FAM83GA6ND36 823 aa12.67□□□□□ -0.38
SNF8-211ENST00000512243 HOXC9P31274 260 aa12.67□□□□□ -0.38
SNF8-211ENST00000512243 CLK2P49760 499 aaKnown RBP12.67□□□□□ -0.38
SNF8-211ENST00000512243 WNT7BP56706 349 aa12.67□□□□□ -0.38
SNF8-211ENST00000512243 IP6K1Q92551 441 aa12.67□□□□□ -0.38
SNF8-211ENST00000512243 UNC93B1Q9H1C4 597 aa12.67□□□□□ -0.38
SNF8-211ENST00000512243 EVA1BQ9NVM1 165 aa12.67□□□□□ -0.38
SNF8-211ENST00000512243 AFF2P51816 1311 aa12.66□□□□□ -0.38
SNF8-211ENST00000512243 PPP2R1AP30153 589 aa12.66□□□□□ -0.38
SNF8-211ENST00000512243 LINC01559Q495D7 138 aa12.66□□□□□ -0.38
SNF8-211ENST00000512243 WNK3Q9BYP7 1800 aa12.66□□□□□ -0.38
SNF8-211ENST00000512243 CTHP32929 405 aa12.65□□□□□ -0.38
SNF8-211ENST00000512243 MTHFSP49914 203 aa12.65□□□□□ -0.38
SNF8-211ENST00000512243 KCNH2Q12809 1159 aa12.65□□□□□ -0.38
SNF8-211ENST00000512243 FAM117AQ9C073 453 aa12.65□□□□□ -0.38
SNF8-211ENST00000512243 BTG4Q9NY30 223 aa12.65□□□□□ -0.38
SNF8-211ENST00000512243 INSRP06213 1382 aa12.65□□□□□ -0.38
SNF8-211ENST00000512243 LYPD8Q6UX82 237 aa12.64□□□□□ -0.39
SNF8-211ENST00000512243 FNBP4Q8N3X1 1017 aaPredicted RBP12.64□□□□□ -0.39
SNF8-211ENST00000512243 SNIP1Q8TAD8 396 aaKnown RBP12.64□□□□□ -0.39
SNF8-211ENST00000512243 CFAP53Q96M91 514 aa12.64□□□□□ -0.39
SNF8-211ENST00000512243 RSPH6AQ9H0K4 717 aa12.64□□□□□ -0.39
SNF8-211ENST00000512243 COL3A1P02461 1466 aaPredicted RBP12.64□□□□□ -0.39
SNF8-211ENST00000512243 J3QL48 77 aa12.63□□□□□ -0.39
SNF8-211ENST00000512243 LILRB3O75022 631 aa12.63□□□□□ -0.39
SNF8-211ENST00000512243 CSB-PGBD3P0DP91 1061 aa12.63□□□□□ -0.39
SNF8-211ENST00000512243 EVA1CP58658 441 aa12.63□□□□□ -0.39
SNF8-211ENST00000512243 UNC5CLQ8IV45 518 aa12.63□□□□□ -0.39
SNF8-211ENST00000512243 ANKRD24Q8TF21 1146 aa12.63□□□□□ -0.39
SNF8-211ENST00000512243 LTV1Q96GA3 475 aaPredicted RBP12.63□□□□□ -0.39
SNF8-211ENST00000512243 STRN4Q9NRL3 753 aa12.63□□□□□ -0.39
SNF8-211ENST00000512243 USP21Q9UK80 565 aa12.63□□□□□ -0.39
SNF8-211ENST00000512243 BCL9LQ86UU0 1499 aa12.63□□□□□ -0.39
SNF8-211ENST00000512243 RGPD1P0DJD0 1748 aa12.62□□□□□ -0.39
SNF8-211ENST00000512243 SMPD1P17405 629 aa12.62□□□□□ -0.39
SNF8-211ENST00000512243 SH3BP2P78314 561 aa12.62□□□□□ -0.39
SNF8-211ENST00000512243 TUSC1Q2TAM9 212 aa12.62□□□□□ -0.39
SNF8-211ENST00000512243 HSP90AB2PQ58FF8 381 aa12.62□□□□□ -0.39
SNF8-211ENST00000512243 RTL5Q5HYW3 569 aaPredicted RBP12.62□□□□□ -0.39
SNF8-211ENST00000512243 BAP1Q92560 729 aa12.62□□□□□ -0.39
SNF8-211ENST00000512243 MAP10Q9P2G4 905 aa12.62□□□□□ -0.39
SNF8-211ENST00000512243 ATRNO75882 1429 aa12.62□□□□□ -0.39
SNF8-211ENST00000512243 WDR17Q8IZU2 1322 aa12.62□□□□□ -0.39
SNF8-211ENST00000512243 ZNF772Q68DY9 489 aaPredicted RBP12.61□□□□□ -0.39
SNF8-211ENST00000512243 ZNF787Q6DD87 383 aa12.61□□□□□ -0.39
SNF8-211ENST00000512243 EHBP1Q8NDI1 1231 aa12.61□□□□□ -0.39
SNF8-211ENST00000512243 AAASQ9NRG9 546 aa12.61□□□□□ -0.39
SNF8-211ENST00000512243 CRB1P82279 1406 aa12.61□□□□□ -0.39
SNF8-211ENST00000512243 PARP4Q9UKK3 1724 aaKnown RBP12.6□□□□□ -0.39
SNF8-211ENST00000512243 EIF4A2Q14240 407 aaKnown RBP12.6□□□□□ -0.39
SNF8-211ENST00000512243 CCDC9Q9Y3X0 531 aaKnown RBP12.6□□□□□ -0.39
SNF8-211ENST00000512243 DIAPH1O60610 1272 aaKnown RBP12.59□□□□□ -0.39
SNF8-211ENST00000512243 LARP1Q6PKG0 1096 aaKnown RBP12.59□□□□□ -0.39
SNF8-211ENST00000512243 TOM1L2Q6ZVM7 507 aa12.59□□□□□ -0.39
SNF8-211ENST00000512243 TRPC5Q9UL62 973 aaPredicted RBP12.59□□□□□ -0.39
SNF8-211ENST00000512243 GLI3P10071 1580 aa12.59□□□□□ -0.39
SNF8-211ENST00000512243 AVPP01185 164 aa12.58□□□□□ -0.4
SNF8-211ENST00000512243 VPS72Q15906 364 aa12.58□□□□□ -0.4
SNF8-211ENST00000512243 DDRGK1Q96HY6 314 aa12.58□□□□□ -0.4
SNF8-211ENST00000512243 NLRP2Q9NX02 1062 aa12.58□□□□□ -0.4
SNF8-211ENST00000512243 F12P00748 615 aaPredicted RBP12.57□□□□□ -0.4
SNF8-211ENST00000512243 IL13P35225 146 aa12.57□□□□□ -0.4
SNF8-211ENST00000512243 ZNF511Q8NB15 262 aa12.57□□□□□ -0.4
SNF8-211ENST00000512243 DACH1Q9UI36 760 aa12.57□□□□□ -0.4
SNF8-211ENST00000512243 NUDCQ9Y266 331 aa12.57□□□□□ -0.4
SNF8-211ENST00000512243 SPATA31A5Q5VU36 1347 aa12.57□□□□□ -0.4
SNF8-211ENST00000512243 SPATA31A7Q8IWB4 1347 aa12.57□□□□□ -0.4
SNF8-211ENST00000512243 NCAPD2Q15021 1401 aa12.56□□□□□ -0.4
SNF8-211ENST00000512243 POTECB2RU33 542 aa12.56□□□□□ -0.4
SNF8-211ENST00000512243 AXIN1O15169 862 aa12.56□□□□□ -0.4
SNF8-211ENST00000512243 ALDH1A1P00352 501 aa12.56□□□□□ -0.4
SNF8-211ENST00000512243 CARD10Q9BWT7 1032 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms