RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 SUCLG2Q96I99 432 aa12.5□□□□□ -0.41
PDGFRA-209ENST00000512143 ARXQ96QS3 562 aa12.5□□□□□ -0.41
PDGFRA-209ENST00000512143 UBN2Q6ZU65 1347 aa12.5□□□□□ -0.41
PDGFRA-209ENST00000512143 C4AP0C0L4 1744 aa12.5□□□□□ -0.41
PDGFRA-209ENST00000512143 USP42Q9H9J4 1324 aaKnown RBP12.49□□□□□ -0.41
PDGFRA-209ENST00000512143 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.49□□□□□ -0.41
PDGFRA-209ENST00000512143 PCCAP05165 728 aaPredicted RBP12.49□□□□□ -0.41
PDGFRA-209ENST00000512143 EN1Q05925 392 aaPredicted RBP12.49□□□□□ -0.41
PDGFRA-209ENST00000512143 POLA2Q14181 598 aa12.49□□□□□ -0.41
PDGFRA-209ENST00000512143 ZNF827Q17R98 1081 aa12.49□□□□□ -0.41
PDGFRA-209ENST00000512143 RABL6Q3YEC7 729 aaPredicted RBP12.49□□□□□ -0.41
PDGFRA-209ENST00000512143 ZBTB38Q8NAP3 1195 aaPredicted RBP12.49□□□□□ -0.41
PDGFRA-209ENST00000512143 SSH3Q8TE77 659 aa12.49□□□□□ -0.41
PDGFRA-209ENST00000512143 DCTPP1Q9H773 170 aa12.49□□□□□ -0.41
PDGFRA-209ENST00000512143 ZNF652Q9Y2D9 606 aa12.49□□□□□ -0.41
PDGFRA-209ENST00000512143 PNMA6EA0A0J9YXQ4 647 aa12.48□□□□□ -0.41
PDGFRA-209ENST00000512143 GPTP24298 496 aa12.48□□□□□ -0.41
PDGFRA-209ENST00000512143 FOXO4P98177 505 aa12.48□□□□□ -0.41
PDGFRA-209ENST00000512143 EZH2Q15910 746 aaKnown RBP12.48□□□□□ -0.41
PDGFRA-209ENST00000512143 EPHA10Q5JZY3 1008 aa12.48□□□□□ -0.41
PDGFRA-209ENST00000512143 USPL1Q5W0Q7 1092 aa12.48□□□□□ -0.41
PDGFRA-209ENST00000512143 UBE3BQ7Z3V4 1068 aa12.48□□□□□ -0.41
PDGFRA-209ENST00000512143 PPP1R42Q7Z4L9 355 aa12.48□□□□□ -0.41
PDGFRA-209ENST00000512143 CCDC125Q86Z20 511 aa12.48□□□□□ -0.41
PDGFRA-209ENST00000512143 PLA2G12BQ9BX93 195 aa12.48□□□□□ -0.41
PDGFRA-209ENST00000512143 BICC1Q9H694 974 aaKnown RBP12.48□□□□□ -0.41
PDGFRA-209ENST00000512143 SRP68Q9UHB9 627 aaKnown RBP12.48□□□□□ -0.41
PDGFRA-209ENST00000512143 CDHR2Q9BYE9 1310 aa12.47□□□□□ -0.41
PDGFRA-209ENST00000512143 HMMRO75330 724 aa12.47□□□□□ -0.41
PDGFRA-209ENST00000512143 PARP10Q53GL7 1025 aa12.47□□□□□ -0.41
PDGFRA-209ENST00000512143 SUSD4Q5VX71 490 aa12.47□□□□□ -0.41
PDGFRA-209ENST00000512143 ILDR2Q71H61 639 aa12.47□□□□□ -0.41
PDGFRA-209ENST00000512143 JARID2Q92833 1246 aaPredicted RBP12.47□□□□□ -0.41
PDGFRA-209ENST00000512143 GCC1Q96CN9 775 aa12.47□□□□□ -0.41
PDGFRA-209ENST00000512143 ZPR1O75312 459 aa12.46□□□□□ -0.41
PDGFRA-209ENST00000512143 PHF14O94880 888 aa12.46□□□□□ -0.41
PDGFRA-209ENST00000512143 RFC4P35249 363 aa12.46□□□□□ -0.41
PDGFRA-209ENST00000512143 BAG6P46379 1132 aa12.46□□□□□ -0.41
PDGFRA-209ENST00000512143 TBC1D9BQ66K14 1250 aa12.46□□□□□ -0.41
PDGFRA-209ENST00000512143 NIP7Q9Y221 180 aaKnown RBP eCLIP12.46□□□□□ -0.41
PDGFRA-209ENST00000512143 TUBGCP6Q96RT7 1819 aa12.46□□□□□ -0.42
PDGFRA-209ENST00000512143 NTSR2O95665 410 aa12.45□□□□□ -0.42
PDGFRA-209ENST00000512143 GYS1P13807 737 aa12.45□□□□□ -0.42
PDGFRA-209ENST00000512143 NUCB1Q02818 461 aa12.45□□□□□ -0.42
PDGFRA-209ENST00000512143 SF3B2Q13435 895 aaKnown RBP12.45□□□□□ -0.42
PDGFRA-209ENST00000512143 DEFB132Q7Z7B7 95 aa12.45□□□□□ -0.42
PDGFRA-209ENST00000512143 SYNE4Q8N205 404 aa12.45□□□□□ -0.42
PDGFRA-209ENST00000512143 FAM89AQ96GI7 184 aa12.45□□□□□ -0.42
PDGFRA-209ENST00000512143 UTP14AQ9BVJ6 771 aaKnown RBP12.45□□□□□ -0.42
PDGFRA-209ENST00000512143 COL24A1Q17RW2 1714 aa12.45□□□□□ -0.42
PDGFRA-209ENST00000512143 SRGAP3O43295 1099 aa12.44□□□□□ -0.42
PDGFRA-209ENST00000512143 CSF1RP07333 972 aa12.44□□□□□ -0.42
PDGFRA-209ENST00000512143 RFX5P48382 616 aaPredicted RBP12.44□□□□□ -0.42
PDGFRA-209ENST00000512143 COL23A1Q86Y22 540 aaPredicted RBP12.44□□□□□ -0.42
PDGFRA-209ENST00000512143 FLAD1Q8NFF5 587 aa12.44□□□□□ -0.42
PDGFRA-209ENST00000512143 ANO8Q9HCE9 1232 aaPredicted RBP12.44□□□□□ -0.42
PDGFRA-209ENST00000512143 TFCP2L1Q9NZI6 479 aa12.44□□□□□ -0.42
PDGFRA-209ENST00000512143 TRMT112Q9UI30 125 aaKnown RBP12.44□□□□□ -0.42
PDGFRA-209ENST00000512143 PDZRN3Q9UPQ7 1066 aa12.44□□□□□ -0.42
PDGFRA-209ENST00000512143 NOP58Q9Y2X3 529 aaKnown RBP12.44□□□□□ -0.42
PDGFRA-209ENST00000512143 PNPLA7Q6ZV29 1317 aa12.43□□□□□ -0.42
PDGFRA-209ENST00000512143 SH3TC1Q8TE82 1336 aa12.43□□□□□ -0.42
PDGFRA-209ENST00000512143 QSER1Q2KHR3 1735 aa12.43□□□□□ -0.42
PDGFRA-209ENST00000512143 TM4SF1P30408 202 aa12.43□□□□□ -0.42
PDGFRA-209ENST00000512143 NFIXQ14938 502 aa12.43□□□□□ -0.42
PDGFRA-209ENST00000512143 RTL5Q5HYW3 569 aaPredicted RBP12.43□□□□□ -0.42
PDGFRA-209ENST00000512143 SLC10A5Q5PT55 438 aa12.43□□□□□ -0.42
PDGFRA-209ENST00000512143 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
PDGFRA-209ENST00000512143 SLC15A2Q16348 729 aa12.42□□□□□ -0.42
PDGFRA-209ENST00000512143 LMBR1LQ6UX01 489 aa12.42□□□□□ -0.42
PDGFRA-209ENST00000512143 SKAP1Q86WV1 359 aa12.42□□□□□ -0.42
PDGFRA-209ENST00000512143 SETDB2Q96T68 719 aa12.42□□□□□ -0.42
PDGFRA-209ENST00000512143 COPRSQ9NQ92 184 aa12.42□□□□□ -0.42
PDGFRA-209ENST00000512143 PDE8AO60658 829 aa12.41□□□□□ -0.42
PDGFRA-209ENST00000512143 PTPN12Q05209 780 aaKnown RBP12.41□□□□□ -0.42
PDGFRA-209ENST00000512143 CHD1LQ86WJ1 897 aa12.41□□□□□ -0.42
PDGFRA-209ENST00000512143 DDX60Q8IY21 1712 aaKnown RBP12.41□□□□□ -0.42
PDGFRA-209ENST00000512143 TTLL11Q8NHH1 800 aa12.41□□□□□ -0.42
PDGFRA-209ENST00000512143 MYH3P11055 1940 aa12.41□□□□□ -0.42
PDGFRA-209ENST00000512143 LAMB2P55268 1798 aa12.41□□□□□ -0.42
PDGFRA-209ENST00000512143 SURF6O75683 361 aaKnown RBP12.4□□□□□ -0.42
PDGFRA-209ENST00000512143 PDE4AP27815 886 aa12.4□□□□□ -0.42
PDGFRA-209ENST00000512143 CTSWP56202 376 aa12.4□□□□□ -0.42
PDGFRA-209ENST00000512143 BICDL1Q6ZP65 573 aa12.4□□□□□ -0.42
PDGFRA-209ENST00000512143 UPF1Q92900 1129 aaKnown RBP eCLIP12.4□□□□□ -0.42
PDGFRA-209ENST00000512143 NYXQ9GZU5 481 aa12.4□□□□□ -0.42
PDGFRA-209ENST00000512143 STK32BQ9NY57 414 aa12.4□□□□□ -0.42
PDGFRA-209ENST00000512143 EXOC6BQ9Y2D4 811 aa12.4□□□□□ -0.42
PDGFRA-209ENST00000512143 CARMIL3Q8ND23 1372 aa12.4□□□□□ -0.42
PDGFRA-209ENST00000512143 FAM177BA6PVY3 158 aa12.39□□□□□ -0.43
PDGFRA-209ENST00000512143 RAB11FIP3O75154 756 aa12.39□□□□□ -0.43
PDGFRA-209ENST00000512143 HCLS1P14317 486 aaPredicted RBP12.39□□□□□ -0.43
PDGFRA-209ENST00000512143 HSP90B1P14625 803 aaKnown RBP12.39□□□□□ -0.43
PDGFRA-209ENST00000512143 ERFEQ4G0M1 354 aa12.39□□□□□ -0.43
PDGFRA-209ENST00000512143 ANKRD45Q5TZF3 282 aa12.39□□□□□ -0.43
PDGFRA-209ENST00000512143 TPTE2Q6XPS3 522 aa12.39□□□□□ -0.43
PDGFRA-209ENST00000512143 NUTM1Q86Y26 1132 aa12.39□□□□□ -0.43
PDGFRA-209ENST00000512143 PA2G4Q9UQ80 394 aaKnown RBP12.39□□□□□ -0.43
PDGFRA-209ENST00000512143 POLRMTO00411 1230 aaKnown RBP12.38□□□□□ -0.43
PDGFRA-209ENST00000512143 DDR1Q08345 913 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms