RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 SLC4A10Q6U841 1118 aa10.17□□□□□ -0.78
HTT-209ENST00000512068 ADAM33Q9BZ11 813 aa10.17□□□□□ -0.78
HTT-209ENST00000512068 DBF4Q9UBU7 674 aaPredicted RBP10.17□□□□□ -0.78
HTT-209ENST00000512068 SLIT2O94813 1529 aa10.17□□□□□ -0.78
HTT-209ENST00000512068 DISP2A7MBM2 1401 aa10.16□□□□□ -0.78
HTT-209ENST00000512068 LAMB4A4D0S4 1761 aa10.16□□□□□ -0.78
HTT-209ENST00000512068 SPATA31A5Q5VU36 1347 aa10.16□□□□□ -0.78
HTT-209ENST00000512068 SPATA31A7Q8IWB4 1347 aa10.16□□□□□ -0.78
HTT-209ENST00000512068 GNPATO15228 680 aa10.16□□□□□ -0.78
HTT-209ENST00000512068 GIGYF1O75420 1035 aaPredicted RBP10.16□□□□□ -0.78
HTT-209ENST00000512068 DDX58O95786 925 aaKnown RBP10.16□□□□□ -0.78
HTT-209ENST00000512068 SNRPA1P09661 255 aaKnown RBP10.16□□□□□ -0.78
HTT-209ENST00000512068 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.16□□□□□ -0.78
HTT-209ENST00000512068 LRP6O75581 1613 aa10.15□□□□□ -0.78
HTT-209ENST00000512068 HSPA1LP34931 641 aa10.15□□□□□ -0.78
HTT-209ENST00000512068 BCL2L12Q9HB09 334 aa10.15□□□□□ -0.78
HTT-209ENST00000512068 CDHR5Q9HBB8 845 aa10.15□□□□□ -0.78
HTT-209ENST00000512068 SLC24A3Q9HC58 644 aa10.15□□□□□ -0.78
HTT-209ENST00000512068 HYPKQ9NX55 129 aa10.15□□□□□ -0.78
HTT-209ENST00000512068 CHPF2Q9P2E5 772 aa10.15□□□□□ -0.78
HTT-209ENST00000512068 USP21Q9UK80 565 aa10.15□□□□□ -0.78
HTT-209ENST00000512068 PXDNLA1KZ92 1463 aa10.15□□□□□ -0.78
HTT-209ENST00000512068 C5P01031 1676 aa10.15□□□□□ -0.79
HTT-209ENST00000512068 ITGB4P16144 1822 aa10.14□□□□□ -0.79
HTT-209ENST00000512068 VPS72Q15906 364 aa10.14□□□□□ -0.79
HTT-209ENST00000512068 INTS3Q68E01 1043 aaKnown RBP10.14□□□□□ -0.79
HTT-209ENST00000512068 SYTL4Q96C24 671 aaPredicted RBP10.14□□□□□ -0.79
HTT-209ENST00000512068 N4BP2Q86UW6 1770 aaPredicted RBP10.14□□□□□ -0.79
HTT-209ENST00000512068 TOGARAM1Q9Y4F4 1720 aa10.13□□□□□ -0.79
HTT-209ENST00000512068 KDM2BQ8NHM5 1336 aa10.13□□□□□ -0.79
HTT-209ENST00000512068 G2E3Q7L622 706 aa10.13□□□□□ -0.79
HTT-209ENST00000512068 KRI1Q8N9T8 703 aaKnown RBP10.13□□□□□ -0.79
HTT-209ENST00000512068 ZNF496Q96IT1 587 aaPredicted RBP10.13□□□□□ -0.79
HTT-209ENST00000512068 ZBTB40Q9NUA8 1239 aa10.13□□□□□ -0.79
HTT-209ENST00000512068 PAPPAQ13219 1627 aa10.13□□□□□ -0.79
HTT-209ENST00000512068 UBR2Q8IWV8 1755 aa10.13□□□□□ -0.79
HTT-209ENST00000512068 DOT1LQ8TEK3 1739 aa10.13□□□□□ -0.79
HTT-209ENST00000512068 HEG1Q9ULI3 1381 aa10.13□□□□□ -0.79
HTT-209ENST00000512068 F6X3S4 739 aa10.12□□□□□ -0.79
HTT-209ENST00000512068 GNAI3P08754 354 aa10.12□□□□□ -0.79
HTT-209ENST00000512068 FAM163AQ96GL9 167 aaPredicted RBP10.12□□□□□ -0.79
HTT-209ENST00000512068 TEX13AQ9BXU3 409 aaPredicted RBP10.12□□□□□ -0.79
HTT-209ENST00000512068 DDX21Q9NR30 783 aaKnown RBP eCLIP10.12□□□□□ -0.79
HTT-209ENST00000512068 HDAC5Q9UQL6 1122 aa10.12□□□□□ -0.79
HTT-209ENST00000512068 RGS12O14924 1447 aa10.12□□□□□ -0.79
HTT-209ENST00000512068 ERBB4Q15303 1308 aa10.11□□□□□ -0.79
HTT-209ENST00000512068 ZBTB7BO15156 539 aaPredicted RBP10.11□□□□□ -0.79
HTT-209ENST00000512068 HMMRO75330 724 aa10.11□□□□□ -0.79
HTT-209ENST00000512068 FECHP22830 423 aa10.11□□□□□ -0.79
HTT-209ENST00000512068 NEXNQ0ZGT2 675 aa10.11□□□□□ -0.79
HTT-209ENST00000512068 MAP2K5Q13163 448 aa10.11□□□□□ -0.79
HTT-209ENST00000512068 HDAC1Q13547 482 aaPredicted RBP10.11□□□□□ -0.79
HTT-209ENST00000512068 FAM98CQ17RN3 349 aaKnown RBP10.11□□□□□ -0.79
HTT-209ENST00000512068 NPM2Q86SE8 214 aaKnown RBP10.11□□□□□ -0.79
HTT-209ENST00000512068 FNBP4Q8N3X1 1017 aaPredicted RBP10.11□□□□□ -0.79
HTT-209ENST00000512068 DNAAF4Q8WXU2 420 aa10.11□□□□□ -0.79
HTT-209ENST00000512068 AK7Q96M32 723 aa10.11□□□□□ -0.79
HTT-209ENST00000512068 SRCIN1Q9C0H9 1055 aa10.11□□□□□ -0.79
HTT-209ENST00000512068 PHAXQ9H814 394 aaKnown RBP10.11□□□□□ -0.79
HTT-209ENST00000512068 PCDHB15Q9Y5E8 787 aa10.11□□□□□ -0.79
HTT-209ENST00000512068 IRF6O14896 467 aa10.1□□□□□ -0.79
HTT-209ENST00000512068 PTCD1O75127 700 aaKnown RBP10.1□□□□□ -0.79
HTT-209ENST00000512068 MYL6BP14649 208 aa10.1□□□□□ -0.79
HTT-209ENST00000512068 EMP3P54852 163 aa10.1□□□□□ -0.79
HTT-209ENST00000512068 AIMP1Q12904 312 aaKnown RBP10.1□□□□□ -0.79
HTT-209ENST00000512068 RIC3Q7Z5B4 369 aa10.1□□□□□ -0.79
HTT-209ENST00000512068 C1orf115Q9H7X2 142 aa10.1□□□□□ -0.79
HTT-209ENST00000512068 BCL9LQ86UU0 1499 aa10.1□□□□□ -0.79
HTT-209ENST00000512068 AFF2P51816 1311 aa10.09□□□□□ -0.79
HTT-209ENST00000512068 KCPQ6ZWJ8 1503 aa10.09□□□□□ -0.79
HTT-209ENST00000512068 PRAMEF22A3QJZ6 481 aa10.09□□□□□ -0.79
HTT-209ENST00000512068 PI4KAP2A4QPH2 592 aa10.09□□□□□ -0.79
HTT-209ENST00000512068 STARD3NLO95772 234 aa10.09□□□□□ -0.79
HTT-209ENST00000512068 IGHDP01880 384 aa10.09□□□□□ -0.79
HTT-209ENST00000512068 ANXA1P04083 346 aa10.09□□□□□ -0.79
HTT-209ENST00000512068 GNAI2P04899 355 aa10.09□□□□□ -0.79
HTT-209ENST00000512068 UBTFL1P0CB47 393 aaPredicted RBP10.09□□□□□ -0.79
HTT-209ENST00000512068 PTPREP23469 700 aa10.09□□□□□ -0.79
HTT-209ENST00000512068 RGS3P49796 1198 aa10.09□□□□□ -0.79
HTT-209ENST00000512068 KSR2Q6VAB6 950 aa10.09□□□□□ -0.79
HTT-209ENST00000512068 PI4KAP1Q8N8J0 262 aa10.09□□□□□ -0.79
HTT-209ENST00000512068 MARVELD3Q96A59 401 aa10.09□□□□□ -0.79
HTT-209ENST00000512068 TRPC5Q9UL62 973 aaPredicted RBP10.09□□□□□ -0.79
HTT-209ENST00000512068 VARS2Q5ST30 1063 aaKnown RBP10.08□□□□□ -0.8
HTT-209ENST00000512068 RPAP2Q8IXW5 612 aaPredicted RBP10.08□□□□□ -0.8
HTT-209ENST00000512068 PIGBQ92521 554 aa10.08□□□□□ -0.8
HTT-209ENST00000512068 GCC1Q96CN9 775 aa10.08□□□□□ -0.8
HTT-209ENST00000512068 RBM27Q9P2N5 1060 aaKnown RBP10.08□□□□□ -0.8
HTT-209ENST00000512068 MAP3K2Q9Y2U5 619 aa10.08□□□□□ -0.8
HTT-209ENST00000512068 BCL9O00512 1426 aa10.07□□□□□ -0.8
HTT-209ENST00000512068 ATP10DQ9P241 1426 aa10.07□□□□□ -0.8
HTT-209ENST00000512068 PPP1R3GB7ZBB8 358 aa10.07□□□□□ -0.8
HTT-209ENST00000512068 ALDH1L1O75891 902 aa10.07□□□□□ -0.8
HTT-209ENST00000512068 PROSER3Q2NL68 480 aa10.07□□□□□ -0.8
HTT-209ENST00000512068 LCE2DQ5TA82 110 aaPredicted RBP10.07□□□□□ -0.8
HTT-209ENST00000512068 XAGE3Q8WTP9 111 aa10.07□□□□□ -0.8
HTT-209ENST00000512068 SMARCC1Q92922 1105 aaPredicted RBP10.07□□□□□ -0.8
HTT-209ENST00000512068 ACSBG1Q96GR2 724 aa10.07□□□□□ -0.8
HTT-209ENST00000512068 MEIS3Q99687 375 aa10.07□□□□□ -0.8
HTT-209ENST00000512068 ATG3Q9NT62 314 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms