RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 XAGE3Q8WTP9 111 aa24.96■■□□□ 1.59
SMAD1-211ENST00000512019 BRIP1Q9BX63 1249 aa24.96■■□□□ 1.59
SMAD1-211ENST00000512019 ZNF219Q9P2Y4 722 aaPredicted RBP24.96■■□□□ 1.59
SMAD1-211ENST00000512019 RCAN3Q9UKA8 241 aa24.96■■□□□ 1.59
SMAD1-211ENST00000512019 KIF16BQ96L93 1317 aa24.95■■□□□ 1.58
SMAD1-211ENST00000512019 BRPF1P55201 1214 aaPredicted RBP24.95■■□□□ 1.58
SMAD1-211ENST00000512019 COPS6Q7L5N1 327 aa24.95■■□□□ 1.58
SMAD1-211ENST00000512019 ZC3H4Q9UPT8 1303 aaKnown RBP24.94■■□□□ 1.58
SMAD1-211ENST00000512019 DDX58O95786 925 aaKnown RBP24.94■■□□□ 1.58
SMAD1-211ENST00000512019 PDE6BP35913 854 aa24.94■■□□□ 1.58
SMAD1-211ENST00000512019 AIMP1Q12904 312 aaKnown RBP24.94■■□□□ 1.58
SMAD1-211ENST00000512019 FLIIQ13045 1269 aa24.94■■□□□ 1.58
SMAD1-211ENST00000512019 PHAXQ9H814 394 aaKnown RBP24.94■■□□□ 1.58
SMAD1-211ENST00000512019 C21orf2O43822 256 aa24.93■■□□□ 1.58
SMAD1-211ENST00000512019 SETDB2Q96T68 719 aa24.93■■□□□ 1.58
SMAD1-211ENST00000512019 FSTL1Q12841 308 aa24.92■■□□□ 1.58
SMAD1-211ENST00000512019 TTLL7Q6ZT98 887 aa24.92■■□□□ 1.58
SMAD1-211ENST00000512019 CNBD1Q8NA66 436 aa24.92■■□□□ 1.58
SMAD1-211ENST00000512019 PTPRCP08575 1304 aa24.91■■□□□ 1.58
SMAD1-211ENST00000512019 MAP3K15Q6ZN16 1313 aa24.91■■□□□ 1.58
SMAD1-211ENST00000512019 GLTPD2A6NH11 291 aa24.91■■□□□ 1.58
SMAD1-211ENST00000512019 FKBP5Q13451 457 aaPredicted RBP24.91■■□□□ 1.58
SMAD1-211ENST00000512019 G2E3Q7L622 706 aa24.91■■□□□ 1.58
SMAD1-211ENST00000512019 RGL2O15211 777 aa24.9■■□□□ 1.58
SMAD1-211ENST00000512019 BCAR3O75815 825 aa24.9■■□□□ 1.58
SMAD1-211ENST00000512019 PLBD2Q8NHP8 589 aa24.9■■□□□ 1.58
SMAD1-211ENST00000512019 PDZRN3Q9UPQ7 1066 aa24.9■■□□□ 1.58
SMAD1-211ENST00000512019 ERVV-1B6SEH8 477 aa24.89■■□□□ 1.58
SMAD1-211ENST00000512019 ANKRD13DQ6ZTN6 518 aa24.89■■□□□ 1.58
SMAD1-211ENST00000512019 ZNF652Q9Y2D9 606 aa24.89■■□□□ 1.58
SMAD1-211ENST00000512019 NPHP1O15259 732 aa24.88■■□□□ 1.57
SMAD1-211ENST00000512019 ST5P78524 1137 aa24.88■■□□□ 1.57
SMAD1-211ENST00000512019 ZBTB3Q9H5J0 574 aa24.88■■□□□ 1.57
SMAD1-211ENST00000512019 IPO8O15397 1037 aaKnown RBP24.87■■□□□ 1.57
SMAD1-211ENST00000512019 SRGNP10124 158 aa24.87■■□□□ 1.57
SMAD1-211ENST00000512019 RIC3Q7Z5B4 369 aa24.87■■□□□ 1.57
SMAD1-211ENST00000512019 POTECB2RU33 542 aa24.86■■□□□ 1.57
SMAD1-211ENST00000512019 VEGFAP15692 232 aaPredicted RBP24.86■■□□□ 1.57
SMAD1-211ENST00000512019 KSR2Q6VAB6 950 aa24.86■■□□□ 1.57
SMAD1-211ENST00000512019 SMC1BQ8NDV3 1235 aa24.86■■□□□ 1.57
SMAD1-211ENST00000512019 NOB1Q9ULX3 412 aaKnown RBP24.86■■□□□ 1.57
SMAD1-211ENST00000512019 NUP98P52948 1817 aa24.86■■□□□ 1.57
SMAD1-211ENST00000512019 CENPBP07199 599 aaPredicted RBP24.85■■□□□ 1.57
SMAD1-211ENST00000512019 STYK1Q6J9G0 422 aa24.85■■□□□ 1.57
SMAD1-211ENST00000512019 PRPF40BQ6NWY9 871 aaKnown RBP24.85■■□□□ 1.57
SMAD1-211ENST00000512019 CLEC4GQ6UXB4 293 aa24.85■■□□□ 1.57
SMAD1-211ENST00000512019 ARHGAP45Q92619 1136 aa24.85■■□□□ 1.57
SMAD1-211ENST00000512019 FRAT1Q92837 279 aaPredicted RBP24.85■■□□□ 1.57
SMAD1-211ENST00000512019 PI4KAP2A4QPH2 592 aa24.84■■□□□ 1.57
SMAD1-211ENST00000512019 HSP90AB3PQ58FF7 597 aa24.84■■□□□ 1.57
SMAD1-211ENST00000512019 NBPF5PQ86XG9 351 aaPredicted RBP24.84■■□□□ 1.57
SMAD1-211ENST00000512019 PI4KAP1Q8N8J0 262 aa24.84■■□□□ 1.57
SMAD1-211ENST00000512019 CNKSR1Q969H4 720 aa24.84■■□□□ 1.57
SMAD1-211ENST00000512019 KLRG1Q96E93 195 aa24.84■■□□□ 1.57
SMAD1-211ENST00000512019 API5Q9BZZ5 524 aaKnown RBP24.84■■□□□ 1.57
SMAD1-211ENST00000512019 ERFEQ4G0M1 354 aa24.83■■□□□ 1.57
SMAD1-211ENST00000512019 GIGYF2Q6Y7W6 1299 aaKnown RBP24.83■■□□□ 1.57
SMAD1-211ENST00000512019 MASTLQ96GX5 879 aa24.83■■□□□ 1.57
SMAD1-211ENST00000512019 MAP3K2Q9Y2U5 619 aa24.83■■□□□ 1.57
SMAD1-211ENST00000512019 ZKSCAN2Q63HK3 967 aa24.82■■□□□ 1.56
SMAD1-211ENST00000512019 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.82■■□□□ 1.56
SMAD1-211ENST00000512019 DNAAF4Q8WXU2 420 aa24.82■■□□□ 1.56
SMAD1-211ENST00000512019 TAOK3Q9H2K8 898 aa24.82■■□□□ 1.56
SMAD1-211ENST00000512019 LTBP3Q9NS15 1303 aa24.82■■□□□ 1.56
SMAD1-211ENST00000512019 FAM177BA6PVY3 158 aa24.81■■□□□ 1.56
SMAD1-211ENST00000512019 NEXNQ0ZGT2 675 aa24.81■■□□□ 1.56
SMAD1-211ENST00000512019 HLFQ16534 295 aa24.81■■□□□ 1.56
SMAD1-211ENST00000512019 NIP7Q9Y221 180 aaKnown RBP eCLIP24.81■■□□□ 1.56
SMAD1-211ENST00000512019 ANKRD36CQ5JPF3 1778 aa24.8■■□□□ 1.56
SMAD1-211ENST00000512019 ATF7IPQ6VMQ6 1270 aa24.8■■□□□ 1.56
SMAD1-211ENST00000512019 METTL22Q9BUU2 404 aaPredicted RBP24.8■■□□□ 1.56
SMAD1-211ENST00000512019 DPY19L2Q6NUT2 758 aa24.79■■□□□ 1.56
SMAD1-211ENST00000512019 F6X3S4 739 aa24.78■■□□□ 1.56
SMAD1-211ENST00000512019 TRIM27P14373 513 aa24.78■■□□□ 1.56
SMAD1-211ENST00000512019 TCIRG1Q13488 830 aa24.78■■□□□ 1.56
SMAD1-211ENST00000512019 JMYQ8N9B5 988 aa24.77■■□□□ 1.56
SMAD1-211ENST00000512019 C7orf43Q8WVR3 580 aa24.77■■□□□ 1.56
SMAD1-211ENST00000512019 MYD88Q99836 296 aa24.77■■□□□ 1.56
SMAD1-211ENST00000512019 DDNO94850 711 aaPredicted RBP24.76■■□□□ 1.55
SMAD1-211ENST00000512019 MS4A1P11836 297 aa24.76■■□□□ 1.55
SMAD1-211ENST00000512019 NPR1P16066 1061 aa24.76■■□□□ 1.55
SMAD1-211ENST00000512019 SLC4A10Q6U841 1118 aa24.76■■□□□ 1.55
SMAD1-211ENST00000512019 OLFM4Q6UX06 510 aa24.76■■□□□ 1.55
SMAD1-211ENST00000512019 TPTE2Q6XPS3 522 aa24.76■■□□□ 1.55
SMAD1-211ENST00000512019 KLRG2A4D1S0 409 aaPredicted RBP24.75■■□□□ 1.55
SMAD1-211ENST00000512019 PARP10Q53GL7 1025 aa24.75■■□□□ 1.55
SMAD1-211ENST00000512019 SOGA3Q5TF21 947 aa24.75■■□□□ 1.55
SMAD1-211ENST00000512019 FTSJ3Q8IY81 847 aaKnown RBP24.75■■□□□ 1.55
SMAD1-211ENST00000512019 ZNF34Q8IZ26 560 aa24.75■■□□□ 1.55
SMAD1-211ENST00000512019 ABCC4O15439 1325 aa24.75■■□□□ 1.55
SMAD1-211ENST00000512019 GPTP24298 496 aa24.74■■□□□ 1.55
SMAD1-211ENST00000512019 RRP1P56182 461 aaKnown RBP24.74■■□□□ 1.55
SMAD1-211ENST00000512019 LINS1Q8NG48 757 aa24.74■■□□□ 1.55
SMAD1-211ENST00000512019 ISCA1Q9BUE6 129 aa24.74■■□□□ 1.55
SMAD1-211ENST00000512019 ATP5J2-PTCD1G3V325 749 aa24.73■■□□□ 1.55
SMAD1-211ENST00000512019 TRIM28Q13263 835 aaKnown RBP24.73■■□□□ 1.55
SMAD1-211ENST00000512019 CCDC93Q567U6 631 aa24.73■■□□□ 1.55
SMAD1-211ENST00000512019 DZIP1LQ8IYY4 767 aaKnown RBP24.73■■□□□ 1.55
SMAD1-211ENST00000512019 SCN4AP35499 1836 aa24.72■■□□□ 1.55
SMAD1-211ENST00000512019 ABCC12Q96J65 1359 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms