RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 CHRM1P11229 460 aaPredicted RBP2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 IL13P35225 146 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 ARTNQ5T4W7 220 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 MS4A1P11836 297 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 AGXT2Q9BYV1 514 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 ZNF446Q9NWS9 450 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 POGKQ9P215 609 aa2.26□□□□□ -2.05
TRAPPC13-211ENST00000512009 TNRC6BQ9UPQ9 1833 aaKnown RBP2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 WASLO00401 505 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 BCAR3O75815 825 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 ITGAEP38570 1179 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 HDAC1Q13547 482 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 CUL4AQ13619 759 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 KCNF1Q9H3M0 494 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 PNPLA7Q6ZV29 1317 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 TRIOBPQ9H2D6 2365 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 NKRFO15226 690 aaKnown RBP eCLIP2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 TP73O15350 636 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 TBC1D2Q9BYX2 928 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 TAOK2Q9UL54 1235 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 BRPF3Q9ULD4 1205 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 PDZRN3Q9UPQ7 1066 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 USP16Q9Y5T5 823 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 ADGRA2Q96PE1 1338 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 CTIFO43310 598 aaKnown RBP2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 ZNF568Q3ZCX4 644 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 MARCH10Q8NA82 808 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 RBM46Q8TBY0 533 aaKnown RBP2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 GPT2Q8TD30 523 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 SOS1Q07889 1333 aaPredicted RBP2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 A0A1W2PPC1 479 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 HSP90AB1P08238 724 aaKnown RBP2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 KRT24Q2M2I5 525 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 B4GALNT3Q6L9W6 998 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 ATRNL1Q5VV63 1379 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 MED23Q9ULK4 1368 aa2.25□□□□□ -2.05
TRAPPC13-211ENST00000512009 MAP3K10Q02779 954 aa2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 NBPF3Q9H094 633 aa2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 MYT1Q01538 1121 aa2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 MAP3K11Q16584 847 aa2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 LRRC15Q8TF66 581 aa2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 TDRD15B5MCY1 1934 aaKnown RBP2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 NCOR1O75376 2440 aa2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 NYNRINQ9P2P1 1898 aaKnown RBP2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 MYO16Q9Y6X6 1858 aa2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 TRIP12Q14669 1992 aaPredicted RBP2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 FSTL1Q12841 308 aa2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 NGLY1Q96IV0 654 aa2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 SLX1AQ9BQ83 275 aa2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 ZBTB47Q9UFB7 747 aaPredicted RBP2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 TESPA1A2RU30 521 aaPredicted RBP2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 RXRBP28702 533 aa2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 FAM196AQ6ZSG2 479 aa2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 MTFR1LQ9H019 292 aa2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 SPTLC3Q9NUV7 552 aa2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 MYH9P35579 1960 aaKnown RBP2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 CHD6Q8TD26 2715 aa2.24□□□□□ -2.05
TRAPPC13-211ENST00000512009 NUP210Q8TEM1 1887 aaPredicted RBP2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 POLA2Q14181 598 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 TSPYL6Q8N831 410 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 RRP7BPQ9NSQ0 103 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 TTC21BQ7Z4L5 1316 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 NUP210LQ5VU65 1888 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 SLC24A1O60721 1099 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 FECHP22830 423 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 NPY5RQ15761 445 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 IPO9Q96P70 1041 aaKnown RBP2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 SH2B2O14492 632 aaPredicted RBP2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 VAMP4O75379 141 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 PRELPP51888 382 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 TMEM87AQ8NBN3 555 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 BABAM1Q9NWV8 329 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 CCDC93Q567U6 631 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 C15orf52Q6ZUT6 534 aaKnown RBP2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 KCNMB3Q9NPA1 279 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 PPP4R2Q9NY27 417 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 RASSF10A6NK89 507 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 ANKRD7Q92527 254 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 POLKQ9UBT6 870 aa2.23□□□□□ -2.05
TRAPPC13-211ENST00000512009 OBSL1O75147 1896 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 MKRN4PQ13434 485 aaPredicted RBP2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 LRRC4BQ9NT99 713 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 MYT1LQ9UL68 1186 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 SCN10AQ9Y5Y9 1956 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 KIAA1217Q5T5P2 1943 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 COL4A3Q01955 1670 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 PLIN1O60240 522 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 IFIT2P09913 472 aaKnown RBP2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 POU3F3P20264 500 aaPredicted RBP2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 EVCP57679 992 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 PI4K2BQ8TCG2 481 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 SLC4A9Q96Q91 983 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 INTS13Q9NVM9 706 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 CCDC61Q9Y6R9 512 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 TRIM27P14373 513 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 FAM43BQ6ZT52 329 aaPredicted RBP2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 ZNF384Q8TF68 577 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 SNX21Q969T3 373 aa2.22□□□□□ -2.05
TRAPPC13-211ENST00000512009 ADAMTS3O15072 1205 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms