RNA–Protein interactions for RNA: ENST00000511905.5

SPOCK3-219, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-219ENST00000511905 CAVIN1Q6NZI2 390 aaKnown RBP24.82■■□□□ 1.56
SPOCK3-219ENST00000511905 TMEM87AQ8NBN3 555 aa24.82■■□□□ 1.56
SPOCK3-219ENST00000511905 DDX17Q92841 729 aaKnown RBP24.82■■□□□ 1.56
SPOCK3-219ENST00000511905 ZKSCAN1P17029 563 aaPredicted RBP24.81■■□□□ 1.56
SPOCK3-219ENST00000511905 ATP5JP18859 108 aa24.81■■□□□ 1.56
SPOCK3-219ENST00000511905 ARXQ96QS3 562 aa24.81■■□□□ 1.56
SPOCK3-219ENST00000511905 NASPP49321 788 aaPredicted RBP24.81■■□□□ 1.56
SPOCK3-219ENST00000511905 PTH1RQ03431 593 aa24.81■■□□□ 1.56
SPOCK3-219ENST00000511905 CHRNA2Q15822 529 aa24.81■■□□□ 1.56
SPOCK3-219ENST00000511905 RUFY3Q7L099 469 aa24.81■■□□□ 1.56
SPOCK3-219ENST00000511905 CABLES1Q8TDN4 633 aa24.81■■□□□ 1.56
SPOCK3-219ENST00000511905 ANP32BQ92688 251 aaKnown RBP24.81■■□□□ 1.56
SPOCK3-219ENST00000511905 CYP46A1Q9Y6A2 500 aa24.81■■□□□ 1.56
SPOCK3-219ENST00000511905 UBR2Q8IWV8 1755 aa24.8■■□□□ 1.56
SPOCK3-219ENST00000511905 PSMA5P28066 241 aa24.8■■□□□ 1.56
SPOCK3-219ENST00000511905 CASP7P55210 303 aa24.8■■□□□ 1.56
SPOCK3-219ENST00000511905 XIRP1Q702N8 1843 aaKnown RBP24.8■■□□□ 1.56
SPOCK3-219ENST00000511905 CLCN1P35523 988 aa24.79■■□□□ 1.56
SPOCK3-219ENST00000511905 PTPN12Q05209 780 aaKnown RBP24.79■■□□□ 1.56
SPOCK3-219ENST00000511905 TSGA10IPQ3SY00 556 aa24.79■■□□□ 1.56
SPOCK3-219ENST00000511905 EPHA10Q5JZY3 1008 aa24.79■■□□□ 1.56
SPOCK3-219ENST00000511905 RRAGDQ9NQL2 400 aaPredicted RBP24.79■■□□□ 1.56
SPOCK3-219ENST00000511905 MED23Q9ULK4 1368 aa24.79■■□□□ 1.56
SPOCK3-219ENST00000511905 SOS2Q07890 1332 aaPredicted RBP24.79■■□□□ 1.56
SPOCK3-219ENST00000511905 AFDNP55196 1824 aaKnown RBP24.79■■□□□ 1.56
SPOCK3-219ENST00000511905 NCLP19338 710 aaKnown RBP24.78■■□□□ 1.56
SPOCK3-219ENST00000511905 BRINP3Q76B58 766 aa24.78■■□□□ 1.56
SPOCK3-219ENST00000511905 ZCRB1Q8TBF4 217 aaKnown RBP24.78■■□□□ 1.56
SPOCK3-219ENST00000511905 SYAP1Q96A49 352 aaPredicted RBP24.78■■□□□ 1.56
SPOCK3-219ENST00000511905 CCDC8Q9H0W5 538 aaPredicted RBP24.78■■□□□ 1.56
SPOCK3-219ENST00000511905 PDRG1Q9NUG6 133 aa24.78■■□□□ 1.56
SPOCK3-219ENST00000511905 PAPPAQ13219 1627 aa24.78■■□□□ 1.56
SPOCK3-219ENST00000511905 RPAP1Q9BWH6 1393 aaPredicted RBP24.78■■□□□ 1.56
SPOCK3-219ENST00000511905 CASTP20810 708 aaKnown RBP24.78■■□□□ 1.56
SPOCK3-219ENST00000511905 RNF20Q5VTR2 975 aa24.78■■□□□ 1.56
SPOCK3-219ENST00000511905 HMG20BQ9P0W2 317 aa24.78■■□□□ 1.56
SPOCK3-219ENST00000511905 ATP6V1DQ9Y5K8 247 aa24.78■■□□□ 1.56
SPOCK3-219ENST00000511905 NMIQ13287 307 aaPredicted RBP24.77■■□□□ 1.56
SPOCK3-219ENST00000511905 PRPF40BQ6NWY9 871 aaKnown RBP24.77■■□□□ 1.56
SPOCK3-219ENST00000511905 LRSAM1Q6UWE0 723 aa24.77■■□□□ 1.56
SPOCK3-219ENST00000511905 RBM8AQ9Y5S9 174 aaKnown RBP24.77■■□□□ 1.56
SPOCK3-219ENST00000511905 H7C1W4 665 aa24.76■■□□□ 1.55
SPOCK3-219ENST00000511905 CREB3L3Q68CJ9 461 aa24.76■■□□□ 1.55
SPOCK3-219ENST00000511905 ZSCAN22P10073 491 aaPredicted RBP24.75■■□□□ 1.55
SPOCK3-219ENST00000511905 TNNI3KQ59H18 835 aa24.75■■□□□ 1.55
SPOCK3-219ENST00000511905 NOL8Q76FK4 1167 aaKnown RBP24.75■■□□□ 1.55
SPOCK3-219ENST00000511905 JAKMIP1Q96N16 626 aaKnown RBP24.75■■□□□ 1.55
SPOCK3-219ENST00000511905 GPR108Q9NPR9 543 aa24.75■■□□□ 1.55
SPOCK3-219ENST00000511905 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.75■■□□□ 1.55
SPOCK3-219ENST00000511905 FPGT-TNNI3KV9GXZ4 949 aa24.75■■□□□ 1.55
SPOCK3-219ENST00000511905 ANKRD1Q15327 319 aa24.75■■□□□ 1.55
SPOCK3-219ENST00000511905 TRIM44Q96DX7 344 aaPredicted RBP24.75■■□□□ 1.55
SPOCK3-219ENST00000511905 FSD1Q9BTV5 496 aa24.75■■□□□ 1.55
SPOCK3-219ENST00000511905 CARD10Q9BWT7 1032 aa24.75■■□□□ 1.55
SPOCK3-219ENST00000511905 SMC3Q9UQE7 1217 aa24.75■■□□□ 1.55
SPOCK3-219ENST00000511905 COL5A2P05997 1499 aaPredicted RBP24.75■■□□□ 1.55
SPOCK3-219ENST00000511905 A0A087WZG4 1122 aa24.74■■□□□ 1.55
SPOCK3-219ENST00000511905 HS1BP3Q53T59 392 aa24.74■■□□□ 1.55
SPOCK3-219ENST00000511905 TLR7Q9NYK1 1049 aaKnown RBP24.74■■□□□ 1.55
SPOCK3-219ENST00000511905 TMEM63CQ9P1W3 806 aa24.74■■□□□ 1.55
SPOCK3-219ENST00000511905 TNS2Q63HR2 1409 aa24.73■■□□□ 1.55
SPOCK3-219ENST00000511905 USPL1Q5W0Q7 1092 aa24.73■■□□□ 1.55
SPOCK3-219ENST00000511905 SIL1Q9H173 461 aa24.73■■□□□ 1.55
SPOCK3-219ENST00000511905 KCPQ6ZWJ8 1503 aa24.73■■□□□ 1.55
SPOCK3-219ENST00000511905 NUP188Q5SRE5 1749 aa24.73■■□□□ 1.55
SPOCK3-219ENST00000511905 STX6O43752 255 aa24.72■■□□□ 1.55
SPOCK3-219ENST00000511905 PHF14O94880 888 aa24.72■■□□□ 1.55
SPOCK3-219ENST00000511905 UBE3BQ7Z3V4 1068 aa24.72■■□□□ 1.55
SPOCK3-219ENST00000511905 FAM227BQ96M60 508 aa24.72■■□□□ 1.55
SPOCK3-219ENST00000511905 BOLA2Q9H3K6 86 aa24.72■■□□□ 1.55
SPOCK3-219ENST00000511905 ATG3Q9NT62 314 aa24.72■■□□□ 1.55
SPOCK3-219ENST00000511905 SLC27A2O14975 620 aa24.72■■□□□ 1.55
SPOCK3-219ENST00000511905 PRDM11Q9NQV5 511 aa24.72■■□□□ 1.55
SPOCK3-219ENST00000511905 ESPNB1AK53 854 aa24.71■■□□□ 1.55
SPOCK3-219ENST00000511905 KRT32Q14532 448 aa24.71■■□□□ 1.55
SPOCK3-219ENST00000511905 CSPP1Q1MSJ5 1256 aa24.71■■□□□ 1.55
SPOCK3-219ENST00000511905 ADCK5Q3MIX3 580 aa24.71■■□□□ 1.55
SPOCK3-219ENST00000511905 SYT1P21579 422 aa24.7■■□□□ 1.54
SPOCK3-219ENST00000511905 CCDC191Q8NCU4 936 aa24.7■■□□□ 1.54
SPOCK3-219ENST00000511905 HAUS7Q99871 368 aa24.7■■□□□ 1.54
SPOCK3-219ENST00000511905 DBNLQ9UJU6 430 aaKnown RBP24.7■■□□□ 1.54
SPOCK3-219ENST00000511905 A0A0D9SFI3 127 aa24.69■■□□□ 1.54
SPOCK3-219ENST00000511905 NBPF26B4DH59 902 aa24.69■■□□□ 1.54
SPOCK3-219ENST00000511905 KCNJ4P48050 445 aa24.69■■□□□ 1.54
SPOCK3-219ENST00000511905 PRIM1P49642 420 aaKnown RBP24.69■■□□□ 1.54
SPOCK3-219ENST00000511905 FOXO4P98177 505 aa24.69■■□□□ 1.54
SPOCK3-219ENST00000511905 NBPF14Q5TI25 921 aa24.69■■□□□ 1.54
SPOCK3-219ENST00000511905 NBPF10Q6P3W6 841 aaKnown RBP24.69■■□□□ 1.54
SPOCK3-219ENST00000511905 TOM1L2Q6ZVM7 507 aa24.69■■□□□ 1.54
SPOCK3-219ENST00000511905 NBPF15Q8N660 670 aa24.69■■□□□ 1.54
SPOCK3-219ENST00000511905 KLHDC4Q8TBB5 520 aa24.69■■□□□ 1.54
SPOCK3-219ENST00000511905 CWC25Q9NXE8 425 aaPredicted RBP24.69■■□□□ 1.54
SPOCK3-219ENST00000511905 IL2RBP14784 551 aa24.69■■□□□ 1.54
SPOCK3-219ENST00000511905 TFCP2Q12800 502 aa24.69■■□□□ 1.54
SPOCK3-219ENST00000511905 TAF5LO75529 589 aa24.68■■□□□ 1.54
SPOCK3-219ENST00000511905 LETM1O95202 739 aaPredicted RBP24.68■■□□□ 1.54
SPOCK3-219ENST00000511905 F13A1P00488 732 aa24.68■■□□□ 1.54
SPOCK3-219ENST00000511905 PDLIM2Q96JY6 352 aa24.68■■□□□ 1.54
SPOCK3-219ENST00000511905 RBSNQ9H1K0 784 aa24.68■■□□□ 1.54
SPOCK3-219ENST00000511905 ABCA3Q99758 1704 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms