RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 LTBP1Q14766 1721 aa15.59■□□□□ 0.09
RNF4-216ENST00000511859 SNED1Q8TER0 1413 aa15.59■□□□□ 0.09
RNF4-216ENST00000511859 DGKZQ13574 1117 aa15.59■□□□□ 0.09
RNF4-216ENST00000511859 CRY2Q49AN0 593 aa15.59■□□□□ 0.09
RNF4-216ENST00000511859 LARGE2Q8N3Y3 721 aa15.59■□□□□ 0.09
RNF4-216ENST00000511859 KCNQ3O43525 872 aa15.58■□□□□ 0.08
RNF4-216ENST00000511859 SNRPA1P09661 255 aaKnown RBP15.58■□□□□ 0.08
RNF4-216ENST00000511859 PCGF6Q9BYE7 350 aa15.58■□□□□ 0.08
RNF4-216ENST00000511859 ADARB2Q9NS39 739 aaKnown RBP15.58■□□□□ 0.08
RNF4-216ENST00000511859 CEMIPQ8WUJ3 1361 aa15.57■□□□□ 0.08
RNF4-216ENST00000511859 FAM177BA6PVY3 158 aa15.57■□□□□ 0.08
RNF4-216ENST00000511859 CELF2O95319 508 aaKnown RBP15.57■□□□□ 0.08
RNF4-216ENST00000511859 PIP4K2AP48426 406 aaPredicted RBP15.57■□□□□ 0.08
RNF4-216ENST00000511859 NYXQ9GZU5 481 aa15.57■□□□□ 0.08
RNF4-216ENST00000511859 VPS33BQ9H267 617 aa15.57■□□□□ 0.08
RNF4-216ENST00000511859 HSPA5P11021 654 aaKnown RBP15.56■□□□□ 0.08
RNF4-216ENST00000511859 HOXA10P31260 410 aaPredicted RBP15.56■□□□□ 0.08
RNF4-216ENST00000511859 GPRC5DQ9NZD1 345 aa15.56■□□□□ 0.08
RNF4-216ENST00000511859 NOGQ13253 232 aa15.55■□□□□ 0.08
RNF4-216ENST00000511859 NIM1KQ8IY84 436 aa15.55■□□□□ 0.08
RNF4-216ENST00000511859 PGAP2Q9UHJ9 254 aa15.55■□□□□ 0.08
RNF4-216ENST00000511859 HLFQ16534 295 aa15.54■□□□□ 0.08
RNF4-216ENST00000511859 CIAPIN1Q6FI81 312 aa15.54■□□□□ 0.08
RNF4-216ENST00000511859 ZC3H15Q8WU90 426 aaKnown RBP15.54■□□□□ 0.08
RNF4-216ENST00000511859 RPGRQ92834 1020 aaKnown RBP15.54■□□□□ 0.08
RNF4-216ENST00000511859 COL4A5P29400 1685 aa15.54■□□□□ 0.08
RNF4-216ENST00000511859 KIF7Q2M1P5 1343 aa15.53■□□□□ 0.08
RNF4-216ENST00000511859 PRAMEF22A3QJZ6 481 aa15.53■□□□□ 0.08
RNF4-216ENST00000511859 NBPF26B4DH59 902 aa15.53■□□□□ 0.08
RNF4-216ENST00000511859 U2SURPO15042 1029 aaKnown RBP15.53■□□□□ 0.08
RNF4-216ENST00000511859 NBPF10Q6P3W6 841 aaKnown RBP15.53■□□□□ 0.08
RNF4-216ENST00000511859 NBPF15Q8N660 670 aa15.53■□□□□ 0.08
RNF4-216ENST00000511859 CRAMP1Q96RY5 1269 aa15.53■□□□□ 0.08
RNF4-216ENST00000511859 TMX4Q9H1E5 349 aaPredicted RBP15.53■□□□□ 0.08
RNF4-216ENST00000511859 CDC37L1Q7L3B6 337 aa15.52■□□□□ 0.08
RNF4-216ENST00000511859 ERVV-1B6SEH8 477 aa15.51■□□□□ 0.07
RNF4-216ENST00000511859 PPIP5K2O43314 1243 aa15.51■□□□□ 0.07
RNF4-216ENST00000511859 RBM17Q96I25 401 aaKnown RBP15.51■□□□□ 0.07
RNF4-216ENST00000511859 GLIS2Q9BZE0 524 aaPredicted RBP15.51■□□□□ 0.07
RNF4-216ENST00000511859 ZNRF3Q9ULT6 936 aa15.51■□□□□ 0.07
RNF4-216ENST00000511859 CXCL9Q07325 125 aa15.5■□□□□ 0.07
RNF4-216ENST00000511859 NUTM1Q86Y26 1132 aa15.5■□□□□ 0.07
RNF4-216ENST00000511859 CDHR2Q9BYE9 1310 aa15.5■□□□□ 0.07
RNF4-216ENST00000511859 NUP98P52948 1817 aa15.5■□□□□ 0.07
RNF4-216ENST00000511859 PPEF1O14829 653 aaPredicted RBP15.49■□□□□ 0.07
RNF4-216ENST00000511859 PRPF38BQ5VTL8 546 aaKnown RBP15.49■□□□□ 0.07
RNF4-216ENST00000511859 SUPT20HQ8NEM7 779 aa15.49■□□□□ 0.07
RNF4-216ENST00000511859 RTF1Q92541 710 aaKnown RBP15.49■□□□□ 0.07
RNF4-216ENST00000511859 ZNF408Q9H9D4 720 aa15.49■□□□□ 0.07
RNF4-216ENST00000511859 SAGE1Q9NXZ1 904 aa15.49■□□□□ 0.07
RNF4-216ENST00000511859 NPC1L1Q9UHC9 1359 aa15.49■□□□□ 0.07
RNF4-216ENST00000511859 AOC3Q16853 763 aa15.49■□□□□ 0.07
RNF4-216ENST00000511859 PHACTR3Q96KR7 559 aa15.49■□□□□ 0.07
RNF4-216ENST00000511859 RIC1Q4ADV7 1423 aa15.48■□□□□ 0.07
RNF4-216ENST00000511859 ABCC12Q96J65 1359 aa15.48■□□□□ 0.07
RNF4-216ENST00000511859 AKAP11Q9UKA4 1901 aa15.48■□□□□ 0.07
RNF4-216ENST00000511859 PER1O15534 1290 aaPredicted RBP15.48■□□□□ 0.07
RNF4-216ENST00000511859 GMPSP49915 693 aaPredicted RBP15.48■□□□□ 0.07
RNF4-216ENST00000511859 HUNKP57058 714 aa15.48■□□□□ 0.07
RNF4-216ENST00000511859 TNIP1Q15025 636 aa15.48■□□□□ 0.07
RNF4-216ENST00000511859 IBTKQ9P2D0 1353 aaPredicted RBP15.47■□□□□ 0.07
RNF4-216ENST00000511859 POLR2AP24928 1970 aaKnown RBP15.47■□□□□ 0.07
RNF4-216ENST00000511859 TCERG1O14776 1098 aaKnown RBP15.47■□□□□ 0.07
RNF4-216ENST00000511859 HIRAP54198 1017 aaPredicted RBP15.47■□□□□ 0.07
RNF4-216ENST00000511859 CC2D1BQ5T0F9 858 aaKnown RBP15.47■□□□□ 0.07
RNF4-216ENST00000511859 CCDC102AQ96A19 550 aa15.47■□□□□ 0.07
RNF4-216ENST00000511859 ZIC5Q96T25 663 aa15.47■□□□□ 0.07
RNF4-216ENST00000511859 BCL2L13Q9BXK5 485 aa15.47■□□□□ 0.07
RNF4-216ENST00000511859 RTFDC1Q9BY42 306 aaPredicted RBP15.47■□□□□ 0.07
RNF4-216ENST00000511859 ATP6V0A2Q9Y487 856 aa15.47■□□□□ 0.07
RNF4-216ENST00000511859 MAP3K15Q6ZN16 1313 aa15.46■□□□□ 0.07
RNF4-216ENST00000511859 CLSPNQ9HAW4 1339 aa15.46■□□□□ 0.07
RNF4-216ENST00000511859 SOX10P56693 466 aa15.46■□□□□ 0.07
RNF4-216ENST00000511859 NLRP3Q96P20 1036 aa15.46■□□□□ 0.07
RNF4-216ENST00000511859 H7C1D1 291 aa15.45■□□□□ 0.06
RNF4-216ENST00000511859 HTATSF1O43719 755 aaKnown RBP15.45■□□□□ 0.06
RNF4-216ENST00000511859 PRKAR2BP31323 418 aa15.45■□□□□ 0.06
RNF4-216ENST00000511859 RGMBQ6NW40 437 aa15.45■□□□□ 0.06
RNF4-216ENST00000511859 KIF6Q6ZMV9 814 aa15.45■□□□□ 0.06
RNF4-216ENST00000511859 NGEFQ8N5V2 710 aa15.45■□□□□ 0.06
RNF4-216ENST00000511859 CNOT7Q9UIV1 285 aaKnown RBP15.45■□□□□ 0.06
RNF4-216ENST00000511859 COL3A1P02461 1466 aaPredicted RBP15.45■□□□□ 0.06
RNF4-216ENST00000511859 FAM155AB1AL88 458 aaPredicted RBP15.44■□□□□ 0.06
RNF4-216ENST00000511859 TAF7Q15545 349 aaPredicted RBP15.44■□□□□ 0.06
RNF4-216ENST00000511859 SUSD4Q5VX71 490 aa15.44■□□□□ 0.06
RNF4-216ENST00000511859 MCM10Q7L590 875 aa15.44■□□□□ 0.06
RNF4-216ENST00000511859 RSPH6AQ9H0K4 717 aa15.44■□□□□ 0.06
RNF4-216ENST00000511859 BBOX1O75936 387 aa15.43■□□□□ 0.06
RNF4-216ENST00000511859 GPTP24298 496 aa15.43■□□□□ 0.06
RNF4-216ENST00000511859 KIAA2012Q0VF49 1180 aa15.43■□□□□ 0.06
RNF4-216ENST00000511859 PPP1R42Q7Z4L9 355 aa15.43■□□□□ 0.06
RNF4-216ENST00000511859 USP48Q86UV5 1035 aa15.43■□□□□ 0.06
RNF4-216ENST00000511859 ZNF34Q8IZ26 560 aa15.43■□□□□ 0.06
RNF4-216ENST00000511859 C2orf69Q8N8R5 385 aa15.43■□□□□ 0.06
RNF4-216ENST00000511859 RNF186Q9NXI6 227 aa15.43■□□□□ 0.06
RNF4-216ENST00000511859 UBN2Q6ZU65 1347 aa15.43■□□□□ 0.06
RNF4-216ENST00000511859 TRPA1O75762 1119 aa15.42■□□□□ 0.06
RNF4-216ENST00000511859 RAD17O75943 681 aa15.42■□□□□ 0.06
RNF4-216ENST00000511859 KIF23Q02241 960 aaPredicted RBP15.42■□□□□ 0.06
RNF4-216ENST00000511859 SLC10A5Q5PT55 438 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms