RNA–Protein interactions for RNA: ENST00000511665.1

HMCES-208, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

TSL 5

Gene HMCES, Length 643 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-208ENST00000511665 ZNF853P0CG23 659 aa31.31■■■□□ 2.6
HMCES-208ENST00000511665 CCDC184Q52MB2 194 aa31.31■■■□□ 2.6
HMCES-208ENST00000511665 DUSP27Q5VZP5 1158 aa31.31■■■□□ 2.6
HMCES-208ENST00000511665 CEP350Q5VT06 3117 aa31.31■■■□□ 2.6
HMCES-208ENST00000511665 GNAI1P63096 354 aa31.3■■■□□ 2.6
HMCES-208ENST00000511665 FKBP4Q02790 459 aaKnown RBP eCLIP31.3■■■□□ 2.6
HMCES-208ENST00000511665 FSTL1Q12841 308 aa31.3■■■□□ 2.6
HMCES-208ENST00000511665 HOXA10P31260 410 aaPredicted RBP31.29■■■□□ 2.6
HMCES-208ENST00000511665 APLP1P51693 650 aa31.29■■■□□ 2.6
HMCES-208ENST00000511665 TCIRG1Q13488 830 aa31.29■■■□□ 2.6
HMCES-208ENST00000511665 RBM17Q96I25 401 aaKnown RBP31.29■■■□□ 2.6
HMCES-208ENST00000511665 NLRP3Q96P20 1036 aa31.29■■■□□ 2.6
HMCES-208ENST00000511665 IFT57Q9NWB7 429 aa31.29■■■□□ 2.6
HMCES-208ENST00000511665 DBF4Q9UBU7 674 aaPredicted RBP31.29■■■□□ 2.6
HMCES-208ENST00000511665 ARFGEF2Q9Y6D5 1785 aa31.29■■■□□ 2.6
HMCES-208ENST00000511665 SLC10A5Q5PT55 438 aa31.28■■■□□ 2.6
HMCES-208ENST00000511665 RIC1Q4ADV7 1423 aa31.27■■■□□ 2.6
HMCES-208ENST00000511665 NLRP10Q86W26 655 aa31.26■■■□□ 2.59
HMCES-208ENST00000511665 CRAMP1Q96RY5 1269 aa31.26■■■□□ 2.59
HMCES-208ENST00000511665 ZNF277Q9NRM2 450 aaPredicted RBP31.26■■■□□ 2.59
HMCES-208ENST00000511665 TNRC6CQ9HCJ0 1690 aaKnown RBP31.25■■■□□ 2.59
HMCES-208ENST00000511665 POTECB2RU33 542 aa31.25■■■□□ 2.59
HMCES-208ENST00000511665 CC2D2BQ6DHV5 1058 aa31.25■■■□□ 2.59
HMCES-208ENST00000511665 ANKRD13DQ6ZTN6 518 aa31.25■■■□□ 2.59
HMCES-208ENST00000511665 C3orf67Q6ZVT6 689 aa31.25■■■□□ 2.59
HMCES-208ENST00000511665 SYNE4Q8N205 404 aa31.25■■■□□ 2.59
HMCES-208ENST00000511665 HYPKQ9NX55 129 aa31.25■■■□□ 2.59
HMCES-208ENST00000511665 TIAM2Q8IVF5 1701 aa31.24■■■□□ 2.59
HMCES-208ENST00000511665 DDNO94850 711 aaPredicted RBP31.24■■■□□ 2.59
HMCES-208ENST00000511665 SMC1BQ8NDV3 1235 aa31.24■■■□□ 2.59
HMCES-208ENST00000511665 PLBD2Q8NHP8 589 aa31.24■■■□□ 2.59
HMCES-208ENST00000511665 DICER1Q9UPY3 1922 aaKnown RBP31.24■■■□□ 2.59
HMCES-208ENST00000511665 ELL2O00472 640 aaPredicted RBP31.23■■■□□ 2.59
HMCES-208ENST00000511665 ANP32CO43423 234 aa31.23■■■□□ 2.59
HMCES-208ENST00000511665 TRMT112Q9UI30 125 aaKnown RBP31.23■■■□□ 2.59
HMCES-208ENST00000511665 RNF123Q5XPI4 1314 aa31.23■■■□□ 2.59
HMCES-208ENST00000511665 TCERG1O14776 1098 aaKnown RBP31.21■■■□□ 2.59
HMCES-208ENST00000511665 IARSP41252 1262 aaKnown RBP31.2■■■□□ 2.59
HMCES-208ENST00000511665 PSMD1Q99460 953 aa31.2■■■□□ 2.59
HMCES-208ENST00000511665 HCLS1P14317 486 aaPredicted RBP31.19■■■□□ 2.58
HMCES-208ENST00000511665 GRIPAP1Q4V328 841 aa31.19■■■□□ 2.58
HMCES-208ENST00000511665 PPEF1O14829 653 aaPredicted RBP31.18■■■□□ 2.58
HMCES-208ENST00000511665 MRS2Q9HD23 443 aa31.18■■■□□ 2.58
HMCES-208ENST00000511665 SH3TC1Q8TE82 1336 aa31.18■■■□□ 2.58
HMCES-208ENST00000511665 C8orf58Q8NAV2 365 aa31.17■■■□□ 2.58
HMCES-208ENST00000511665 TMX4Q9H1E5 349 aaPredicted RBP31.17■■■□□ 2.58
HMCES-208ENST00000511665 ZNF428Q96B54 188 aa31.16■■■□□ 2.58
HMCES-208ENST00000511665 WDR90Q96KV7 1748 aa31.15■■■□□ 2.58
HMCES-208ENST00000511665 ATP5J2-PTCD1G3V325 749 aa31.15■■■□□ 2.58
HMCES-208ENST00000511665 ISCA1Q9BUE6 129 aa31.15■■■□□ 2.58
HMCES-208ENST00000511665 CHMP4AQ9BY43 222 aa31.15■■■□□ 2.58
HMCES-208ENST00000511665 CCDC27Q2M243 656 aa31.14■■■□□ 2.58
HMCES-208ENST00000511665 RIC3Q7Z5B4 369 aa31.14■■■□□ 2.58
HMCES-208ENST00000511665 JDP2Q8WYK2 163 aa31.14■■■□□ 2.58
HMCES-208ENST00000511665 PHAXQ9H814 394 aaKnown RBP31.14■■■□□ 2.58
HMCES-208ENST00000511665 DNAJC5GQ8N7S2 189 aa31.13■■■□□ 2.57
HMCES-208ENST00000511665 SNED1Q8TER0 1413 aa31.13■■■□□ 2.57
HMCES-208ENST00000511665 FZD9O00144 591 aa31.12■■■□□ 2.57
HMCES-208ENST00000511665 BBOX1O75936 387 aa31.12■■■□□ 2.57
HMCES-208ENST00000511665 DDX46Q7L014 1031 aaKnown RBP31.12■■■□□ 2.57
HMCES-208ENST00000511665 WWC1Q8IX03 1113 aa31.12■■■□□ 2.57
HMCES-208ENST00000511665 ATP6V0A2Q9Y487 856 aa31.12■■■□□ 2.57
HMCES-208ENST00000511665 ABCC4O15439 1325 aa31.12■■■□□ 2.57
HMCES-208ENST00000511665 IQCA1LA6NCM1 817 aa31.11■■■□□ 2.57
HMCES-208ENST00000511665 HTRA3P83110 453 aa31.11■■■□□ 2.57
HMCES-208ENST00000511665 GOLGA2Q08379 1002 aa31.11■■■□□ 2.57
HMCES-208ENST00000511665 CCDC30Q5VVM6 783 aa31.11■■■□□ 2.57
HMCES-208ENST00000511665 FAM89AQ96GI7 184 aa31.11■■■□□ 2.57
HMCES-208ENST00000511665 L3MBTL3Q96JM7 780 aaPredicted RBP31.11■■■□□ 2.57
HMCES-208ENST00000511665 ZNF541Q9H0D2 1346 aa31.11■■■□□ 2.57
HMCES-208ENST00000511665 ANKRD36CQ5JPF3 1778 aa31.1■■■□□ 2.57
HMCES-208ENST00000511665 TRIM28Q13263 835 aaKnown RBP31.1■■■□□ 2.57
HMCES-208ENST00000511665 SLC51AQ86UW1 340 aa31.1■■■□□ 2.57
HMCES-208ENST00000511665 TSPYL6Q8N831 410 aa31.09■■■□□ 2.57
HMCES-208ENST00000511665 SP8Q8IXZ3 490 aa31.08■■■□□ 2.57
HMCES-208ENST00000511665 LARGE2Q8N3Y3 721 aa31.08■■■□□ 2.57
HMCES-208ENST00000511665 TSR2Q969E8 191 aaKnown RBP31.08■■■□□ 2.57
HMCES-208ENST00000511665 NCBP3Q53F19 620 aaKnown RBP31.07■■■□□ 2.56
HMCES-208ENST00000511665 EIF6P56537 245 aaKnown RBP31.06■■■□□ 2.56
HMCES-208ENST00000511665 GRAPQ13588 217 aa31.06■■■□□ 2.56
HMCES-208ENST00000511665 RTL5Q5HYW3 569 aaPredicted RBP31.06■■■□□ 2.56
HMCES-208ENST00000511665 CHADLQ6NUI6 762 aa31.06■■■□□ 2.56
HMCES-208ENST00000511665 GRAPLQ8TC17 118 aaPredicted RBP31.06■■■□□ 2.56
HMCES-208ENST00000511665 TAF1DQ9H5J8 278 aaPredicted RBP31.06■■■□□ 2.56
HMCES-208ENST00000511665 DDX58O95786 925 aaKnown RBP31.04■■■□□ 2.56
HMCES-208ENST00000511665 POTEIP0CG38 1075 aa31.04■■■□□ 2.56
HMCES-208ENST00000511665 POTEJP0CG39 1038 aa31.04■■■□□ 2.56
HMCES-208ENST00000511665 GPC2Q8N158 579 aa31.04■■■□□ 2.56
HMCES-208ENST00000511665 SUPT20HQ8NEM7 779 aa31.04■■■□□ 2.56
HMCES-208ENST00000511665 MYD88Q99836 296 aa31.04■■■□□ 2.56
HMCES-208ENST00000511665 VPS33BQ9H267 617 aa31.04■■■□□ 2.56
HMCES-208ENST00000511665 HACL1Q9UJ83 578 aa31.04■■■□□ 2.56
HMCES-208ENST00000511665 SF3B3Q15393 1217 aaKnown RBP31.03■■■□□ 2.56
HMCES-208ENST00000511665 MPNDQ8N594 471 aa31.03■■■□□ 2.56
HMCES-208ENST00000511665 SALL2Q9Y467 1007 aaPredicted RBP31.03■■■□□ 2.56
HMCES-208ENST00000511665 IL16Q14005 1332 aa31.02■■■□□ 2.56
HMCES-208ENST00000511665 IRS4O14654 1257 aaPredicted RBP31.02■■■□□ 2.56
HMCES-208ENST00000511665 PPIP5K2O43314 1243 aa31.02■■■□□ 2.56
HMCES-208ENST00000511665 DPP8Q6V1X1 898 aaPredicted RBP31.02■■■□□ 2.56
HMCES-208ENST00000511665 GJA3Q9Y6H8 435 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms