RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 CCDC183Q5T5S1 534 aa10.52□□□□□ -0.73
NEK1-207ENST00000511633 TXLNBQ8N3L3 684 aa10.52□□□□□ -0.73
NEK1-207ENST00000511633 TNPO1Q92973 898 aaKnown RBP10.52□□□□□ -0.73
NEK1-207ENST00000511633 SCLT1Q96NL6 688 aa10.52□□□□□ -0.73
NEK1-207ENST00000511633 PHAXQ9H814 394 aaKnown RBP10.52□□□□□ -0.73
NEK1-207ENST00000511633 POLR3AO14802 1390 aaPredicted RBP10.52□□□□□ -0.73
NEK1-207ENST00000511633 F8W031 263 aaPredicted RBP10.52□□□□□ -0.73
NEK1-207ENST00000511633 HOXC9P31274 260 aa10.52□□□□□ -0.73
NEK1-207ENST00000511633 METAP2P50579 478 aaKnown RBP eCLIP10.52□□□□□ -0.73
NEK1-207ENST00000511633 TMEM266Q2M3C6 531 aa10.52□□□□□ -0.73
NEK1-207ENST00000511633 DZIP3Q86Y13 1208 aaKnown RBP10.52□□□□□ -0.73
NEK1-207ENST00000511633 CKAP2LQ8IYA6 745 aa10.52□□□□□ -0.73
NEK1-207ENST00000511633 CCDC112Q8NEF3 446 aa10.52□□□□□ -0.73
NEK1-207ENST00000511633 YTHDC2Q9H6S0 1430 aaKnown RBP10.52□□□□□ -0.73
NEK1-207ENST00000511633 MAP3K5Q99683 1374 aa10.52□□□□□ -0.73
NEK1-207ENST00000511633 ALDH1L1O75891 902 aa10.51□□□□□ -0.73
NEK1-207ENST00000511633 CWF19L2Q2TBE0 894 aaKnown RBP10.51□□□□□ -0.73
NEK1-207ENST00000511633 SLC26A6Q9BXS9 759 aa10.51□□□□□ -0.73
NEK1-207ENST00000511633 CRNKL1Q9BZJ0 848 aaKnown RBP10.51□□□□□ -0.73
NEK1-207ENST00000511633 EPB41L2O43491 1005 aaKnown RBP10.51□□□□□ -0.73
NEK1-207ENST00000511633 CYP7A1P22680 504 aa10.51□□□□□ -0.73
NEK1-207ENST00000511633 C16orf71Q8IYS4 520 aaPredicted RBP10.51□□□□□ -0.73
NEK1-207ENST00000511633 HLA-DOAP06340 250 aa10.51□□□□□ -0.73
NEK1-207ENST00000511633 ATP8B2P98198 1209 aa10.51□□□□□ -0.73
NEK1-207ENST00000511633 TRMT1LQ7Z2T5 733 aaKnown RBP10.51□□□□□ -0.73
NEK1-207ENST00000511633 KIAA1328Q86T90 577 aa10.51□□□□□ -0.73
NEK1-207ENST00000511633 ANKRD44Q8N8A2 993 aa10.51□□□□□ -0.73
NEK1-207ENST00000511633 SMARCC1Q92922 1105 aaPredicted RBP10.51□□□□□ -0.73
NEK1-207ENST00000511633 UTP14AQ9BVJ6 771 aaKnown RBP10.51□□□□□ -0.73
NEK1-207ENST00000511633 LRRC2Q9BYS8 371 aa10.51□□□□□ -0.73
NEK1-207ENST00000511633 ANO10Q9NW15 660 aa10.51□□□□□ -0.73
NEK1-207ENST00000511633 SHANK2Q9UPX8 1470 aa10.51□□□□□ -0.73
NEK1-207ENST00000511633 STX6O43752 255 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 PDE1AP54750 535 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 AXDND1Q5T1B0 1012 aaPredicted RBP10.5□□□□□ -0.73
NEK1-207ENST00000511633 NLRP3Q96P20 1036 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 RAB34Q9BZG1 259 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 ORC3Q9UBD5 711 aaPredicted RBP10.5□□□□□ -0.73
NEK1-207ENST00000511633 KIF5BP33176 963 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 RBM10P98175 930 aaKnown RBP10.5□□□□□ -0.73
NEK1-207ENST00000511633 PAXIP1Q6ZW49 1069 aaPredicted RBP10.5□□□□□ -0.73
NEK1-207ENST00000511633 FSIP1Q8NA03 581 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 CNNM3Q8NE01 707 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 HMG20BQ9P0W2 317 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 TRPM2O94759 1503 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 PPP1R12BO60237 982 aaPredicted RBP10.5□□□□□ -0.73
NEK1-207ENST00000511633 CABP5Q9NP86 173 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 SLC4A4Q9Y6R1 1079 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 ERLIN2O94905 339 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 GSTO1P78417 241 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 TCEANC2Q96MN5 208 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 PANK2Q9BZ23 570 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 NECAB1Q8N987 351 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 TSG101Q99816 390 aa10.5□□□□□ -0.73
NEK1-207ENST00000511633 MAP3K19Q56UN5 1328 aa10.49□□□□□ -0.73
NEK1-207ENST00000511633 SSR1P43307 286 aaKnown RBP10.49□□□□□ -0.73
NEK1-207ENST00000511633 IL27Q8NEV9 243 aa10.49□□□□□ -0.73
NEK1-207ENST00000511633 ZNF397Q8NF99 534 aaPredicted RBP10.49□□□□□ -0.73
NEK1-207ENST00000511633 BRF1Q92994 677 aa10.49□□□□□ -0.73
NEK1-207ENST00000511633 WWC3Q9ULE0 1092 aa10.49□□□□□ -0.73
NEK1-207ENST00000511633 STX8Q9UNK0 236 aa10.49□□□□□ -0.73
NEK1-207ENST00000511633 MYCNP04198 464 aaPredicted RBP10.49□□□□□ -0.73
NEK1-207ENST00000511633 MCM5P33992 734 aa10.49□□□□□ -0.73
NEK1-207ENST00000511633 IL15P40933 162 aaPredicted RBP10.49□□□□□ -0.73
NEK1-207ENST00000511633 BTG4Q9NY30 223 aa10.49□□□□□ -0.73
NEK1-207ENST00000511633 KLF18A0A0U1RQI7 1052 aa10.49□□□□□ -0.73
NEK1-207ENST00000511633 BIN1O00499 593 aa10.49□□□□□ -0.73
NEK1-207ENST00000511633 DCAF5Q96JK2 942 aa10.49□□□□□ -0.73
NEK1-207ENST00000511633 RNMTO43148 476 aaKnown RBP10.48□□□□□ -0.73
NEK1-207ENST00000511633 VAMP4O75379 141 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 LIG1P18858 919 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 ARHGAP29Q52LW3 1261 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 PPP4R3AQ6IN85 833 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 ZFYVE9O95405 1425 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 TSPY3P0CV98 308 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 TSPY8P0CW00 308 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 PICALMQ13492 652 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 SLC9C2Q5TAH2 1124 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 HELBQ8NG08 1087 aaPredicted RBP10.48□□□□□ -0.73
NEK1-207ENST00000511633 CCDC12Q8WUD4 166 aaPredicted RBP10.48□□□□□ -0.73
NEK1-207ENST00000511633 IP6K1Q92551 441 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 TBC1D32Q96NH3 1257 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 EHMT1Q9H9B1 1298 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 WTAPQ15007 396 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 FKBP15Q5T1M5 1219 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 RBM8AQ9Y5S9 174 aaKnown RBP10.48□□□□□ -0.73
NEK1-207ENST00000511633 LINS1Q8NG48 757 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 PUS7Q96PZ0 661 aaKnown RBP10.48□□□□□ -0.73
NEK1-207ENST00000511633 PCDH11XQ9BZA7 1347 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 PCDH11YQ9BZA8 1340 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 LMTK3Q96Q04 1460 aa10.48□□□□□ -0.73
NEK1-207ENST00000511633 MYO1BO43795 1136 aa10.47□□□□□ -0.73
NEK1-207ENST00000511633 BAG4O95429 457 aaKnown RBP10.47□□□□□ -0.73
NEK1-207ENST00000511633 ENOX2Q16206 610 aaKnown RBP10.47□□□□□ -0.73
NEK1-207ENST00000511633 MCMDC2Q4G0Z9 681 aa10.47□□□□□ -0.73
NEK1-207ENST00000511633 IRS4O14654 1257 aaPredicted RBP10.47□□□□□ -0.73
NEK1-207ENST00000511633 ZFYP08048 801 aaPredicted RBP10.47□□□□□ -0.73
NEK1-207ENST00000511633 NAA16Q6N069 864 aaPredicted RBP10.47□□□□□ -0.73
NEK1-207ENST00000511633 ESYT1Q9BSJ8 1104 aa10.47□□□□□ -0.73
NEK1-207ENST00000511633 PBRM1Q86U86 1689 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms