RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 EIF5P55010 431 aaKnown RBP8.55□□□□□ -1.04
CPNE4-208ENST00000511604 ANAPC15P60006 121 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 NEDD9Q14511 834 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 CPLX2Q6PUV4 134 aaKnown RBP8.55□□□□□ -1.04
CPNE4-208ENST00000511604 TEX11Q8IYF3 940 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 IL25Q9H293 177 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 KCND1Q9NSA2 647 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 ERVK-7P63135 1459 aa8.55□□□□□ -1.04
CPNE4-208ENST00000511604 CAND2O75155 1236 aa8.54□□□□□ -1.04
CPNE4-208ENST00000511604 ADCY2Q08462 1091 aa8.54□□□□□ -1.04
CPNE4-208ENST00000511604 TBC1D8BQ0IIM8 1120 aa8.54□□□□□ -1.04
CPNE4-208ENST00000511604 CCDC158Q5M9N0 1113 aa8.54□□□□□ -1.04
CPNE4-208ENST00000511604 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.54□□□□□ -1.04
CPNE4-208ENST00000511604 JPH2Q9BR39 696 aaPredicted RBP8.54□□□□□ -1.04
CPNE4-208ENST00000511604 HMGB1P09429 215 aaKnown RBP8.54□□□□□ -1.04
CPNE4-208ENST00000511604 SNW1Q13573 536 aaKnown RBP8.54□□□□□ -1.04
CPNE4-208ENST00000511604 AP1ARQ63HQ0 302 aa8.54□□□□□ -1.04
CPNE4-208ENST00000511604 INTS3Q68E01 1043 aaKnown RBP8.54□□□□□ -1.04
CPNE4-208ENST00000511604 CASC1Q6TDU7 716 aa8.54□□□□□ -1.04
CPNE4-208ENST00000511604 FUT8Q9BYC5 575 aa8.54□□□□□ -1.04
CPNE4-208ENST00000511604 PRDM16Q9HAZ2 1276 aa8.54□□□□□ -1.04
CPNE4-208ENST00000511604 VEZTQ9HBM0 779 aa8.54□□□□□ -1.04
CPNE4-208ENST00000511604 VPS18Q9P253 973 aa8.54□□□□□ -1.04
CPNE4-208ENST00000511604 MYO5CQ9NQX4 1742 aa8.54□□□□□ -1.04
CPNE4-208ENST00000511604 IQGAP2Q13576 1575 aa8.54□□□□□ -1.04
CPNE4-208ENST00000511604 CLTCL1P53675 1640 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 RNF17Q9BXT8 1623 aaKnown RBP8.53□□□□□ -1.04
CPNE4-208ENST00000511604 CT47B1P0C2W7 299 aaPredicted RBP8.53□□□□□ -1.04
CPNE4-208ENST00000511604 GCFC2P16383 781 aaKnown RBP8.53□□□□□ -1.04
CPNE4-208ENST00000511604 CDC25BP30305 580 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 MCM2P49736 904 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 LRRC31Q6UY01 552 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 PAIP2Q9BPZ3 127 aaKnown RBP8.53□□□□□ -1.04
CPNE4-208ENST00000511604 TRIM6Q9C030 488 aaPredicted RBP8.53□□□□□ -1.04
CPNE4-208ENST00000511604 FAM107BQ9H098 131 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 ARFGAP3Q9NP61 516 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 IRAK4Q9NWZ3 460 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 TADA3O75528 432 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 FBLN1P23142 703 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 SCRN1Q12765 414 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 CCDC30Q5VVM6 783 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 CTCFLQ8NI51 663 aaPredicted RBP8.53□□□□□ -1.04
CPNE4-208ENST00000511604 N4BP2L2Q92802 583 aaPredicted RBP8.53□□□□□ -1.04
CPNE4-208ENST00000511604 EPC1Q9H2F5 836 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 CBX8Q9HC52 389 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 TRAK1Q9UPV9 953 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 CDC42BPAQ5VT25 1732 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 DISP1Q96F81 1524 aa8.53□□□□□ -1.04
CPNE4-208ENST00000511604 ZNF518AQ6AHZ1 1483 aa8.52□□□□□ -1.04
CPNE4-208ENST00000511604 A0A087WWV3 80 aa8.52□□□□□ -1.04
CPNE4-208ENST00000511604 EFCAB8A8MWE9 144 aa8.52□□□□□ -1.04
CPNE4-208ENST00000511604 PPFIA4O75335 1185 aa8.52□□□□□ -1.04
CPNE4-208ENST00000511604 GPTP24298 496 aa8.52□□□□□ -1.04
CPNE4-208ENST00000511604 CCZ1BP86790 482 aa8.52□□□□□ -1.04
CPNE4-208ENST00000511604 CCZ1P86791 482 aaPredicted RBP8.52□□□□□ -1.04
CPNE4-208ENST00000511604 TYRO3Q06418 890 aa8.52□□□□□ -1.04
CPNE4-208ENST00000511604 FBXW10Q5XX13 1052 aa8.52□□□□□ -1.04
CPNE4-208ENST00000511604 FAM173BQ6P4H8 233 aa8.52□□□□□ -1.04
CPNE4-208ENST00000511604 CKAP2LQ8IYA6 745 aa8.52□□□□□ -1.04
CPNE4-208ENST00000511604 MRPL50Q8N5N7 158 aaKnown RBP8.52□□□□□ -1.04
CPNE4-208ENST00000511604 MCM8Q9UJA3 840 aa8.52□□□□□ -1.04
CPNE4-208ENST00000511604 PPRC1Q5VV67 1664 aaKnown RBP8.52□□□□□ -1.05
CPNE4-208ENST00000511604 COQ9O75208 318 aa8.52□□□□□ -1.05
CPNE4-208ENST00000511604 LIG3P49916 1009 aa8.52□□□□□ -1.05
CPNE4-208ENST00000511604 DNM1Q05193 864 aaKnown RBP8.52□□□□□ -1.05
CPNE4-208ENST00000511604 MTA1Q13330 715 aa8.52□□□□□ -1.05
CPNE4-208ENST00000511604 GORABQ5T7V8 394 aa8.52□□□□□ -1.05
CPNE4-208ENST00000511604 TDRD7Q8NHU6 1098 aaKnown RBP8.52□□□□□ -1.05
CPNE4-208ENST00000511604 CCDC26Q8TAB7 109 aa8.52□□□□□ -1.05
CPNE4-208ENST00000511604 ZNF483Q8TF39 744 aaPredicted RBP8.52□□□□□ -1.05
CPNE4-208ENST00000511604 AKAP2Q9Y2D5 859 aa8.52□□□□□ -1.05
CPNE4-208ENST00000511604 CCDC69A6NI79 296 aa8.51□□□□□ -1.05
CPNE4-208ENST00000511604 CCT2P78371 535 aaKnown RBP8.51□□□□□ -1.05
CPNE4-208ENST00000511604 GRIK3Q13003 919 aa8.51□□□□□ -1.05
CPNE4-208ENST00000511604 PRPF38AQ8NAV1 312 aaKnown RBP8.51□□□□□ -1.05
CPNE4-208ENST00000511604 ERCC4Q92889 916 aaPredicted RBP8.51□□□□□ -1.05
CPNE4-208ENST00000511604 SH3GL3Q99963 347 aa8.51□□□□□ -1.05
CPNE4-208ENST00000511604 DCTPP1Q9H773 170 aa8.51□□□□□ -1.05
CPNE4-208ENST00000511604 VAMP4O75379 141 aa8.51□□□□□ -1.05
CPNE4-208ENST00000511604 MYBL2P10244 700 aa8.51□□□□□ -1.05
CPNE4-208ENST00000511604 CPA1P15085 419 aa8.51□□□□□ -1.05
CPNE4-208ENST00000511604 CCNHP51946 323 aaPredicted RBP8.51□□□□□ -1.05
CPNE4-208ENST00000511604 CRYMQ14894 314 aa8.51□□□□□ -1.05
CPNE4-208ENST00000511604 MAP3K11Q16584 847 aa8.51□□□□□ -1.05
CPNE4-208ENST00000511604 ANO6Q4KMQ2 910 aa8.51□□□□□ -1.05
CPNE4-208ENST00000511604 MAP2K7O14733 419 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 SRGAP3O43295 1099 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 NF2P35240 595 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 KCNB2Q92953 911 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 THOC1Q96FV9 657 aaKnown RBP8.5□□□□□ -1.05
CPNE4-208ENST00000511604 TEX13AQ9BXU3 409 aaPredicted RBP8.5□□□□□ -1.05
CPNE4-208ENST00000511604 PLEKHA4Q9H4M7 779 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 CEP152O94986 1710 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 ERC2O15083 957 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 LARGE1O95461 756 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 TUBB4AP04350 444 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 IQGAP1P46940 1657 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 RWDD2BP57060 319 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 EVCP57679 992 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 DDR1Q08345 913 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms