RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 HYAL3O43820 417 aaPredicted RBP7.25□□□□□ -1.25
SCAMP1-204ENST00000511551 AFF1P51825 1210 aaKnown RBP7.25□□□□□ -1.25
SCAMP1-204ENST00000511551 CLDN10P78369 228 aa7.25□□□□□ -1.25
SCAMP1-204ENST00000511551 STAG2Q8N3U4 1231 aa7.25□□□□□ -1.25
SCAMP1-204ENST00000511551 LARGE2Q8N3Y3 721 aa7.25□□□□□ -1.25
SCAMP1-204ENST00000511551 SHISA2Q6UWI4 295 aa7.24□□□□□ -1.25
SCAMP1-204ENST00000511551 BTLAQ7Z6A9 289 aa7.24□□□□□ -1.25
SCAMP1-204ENST00000511551 FMR1NBQ8N0W7 255 aaPredicted RBP7.24□□□□□ -1.25
SCAMP1-204ENST00000511551 UBE2OQ9C0C9 1292 aaKnown RBP7.24□□□□□ -1.25
SCAMP1-204ENST00000511551 JPH1Q9HDC5 661 aaPredicted RBP7.24□□□□□ -1.25
SCAMP1-204ENST00000511551 C21orf2O43822 256 aa7.23□□□□□ -1.25
SCAMP1-204ENST00000511551 LCE3BQ5TA77 95 aa7.23□□□□□ -1.25
SCAMP1-204ENST00000511551 ALDH16A1Q8IZ83 802 aa7.23□□□□□ -1.25
SCAMP1-204ENST00000511551 GSX2Q9BZM3 304 aa7.23□□□□□ -1.25
SCAMP1-204ENST00000511551 PALM3A6NDB9 673 aaPredicted RBP7.22□□□□□ -1.25
SCAMP1-204ENST00000511551 DKK1O94907 266 aa7.22□□□□□ -1.25
SCAMP1-204ENST00000511551 HIF1AQ16665 826 aa7.22□□□□□ -1.25
SCAMP1-204ENST00000511551 WWC1Q8IX03 1113 aa7.22□□□□□ -1.25
SCAMP1-204ENST00000511551 SIX5Q8N196 739 aa7.22□□□□□ -1.25
SCAMP1-204ENST00000511551 NUDT8Q8WV74 236 aa7.22□□□□□ -1.25
SCAMP1-204ENST00000511551 TP53INP1Q96A56 240 aa7.22□□□□□ -1.25
SCAMP1-204ENST00000511551 C2orf49Q9BVC5 232 aaPredicted RBP7.22□□□□□ -1.25
SCAMP1-204ENST00000511551 DNAJB12Q9NXW2 375 aaKnown RBP7.22□□□□□ -1.25
SCAMP1-204ENST00000511551 USP17L3A6NCW0 530 aa7.21□□□□□ -1.26
SCAMP1-204ENST00000511551 USP17L4A6NCW7 530 aa7.21□□□□□ -1.26
SCAMP1-204ENST00000511551 PPP1R12BO60237 982 aaPredicted RBP7.21□□□□□ -1.26
SCAMP1-204ENST00000511551 IER5Q5VY09 327 aa7.21□□□□□ -1.26
SCAMP1-204ENST00000511551 PSAPL1Q6NUJ1 521 aa7.21□□□□□ -1.26
SCAMP1-204ENST00000511551 USP17L2Q6R6M4 530 aa7.21□□□□□ -1.26
SCAMP1-204ENST00000511551 USP17L1Q7RTZ2 530 aa7.21□□□□□ -1.26
SCAMP1-204ENST00000511551 OGFOD1Q8N543 542 aa7.21□□□□□ -1.26
SCAMP1-204ENST00000511551 GAS2L2Q8NHY3 880 aa7.21□□□□□ -1.26
SCAMP1-204ENST00000511551 NAGPAQ9UK23 515 aa7.21□□□□□ -1.26
SCAMP1-204ENST00000511551 ATAD2Q6PL18 1390 aa7.2□□□□□ -1.26
SCAMP1-204ENST00000511551 DMRTC2Q8IXT2 367 aaPredicted RBP7.2□□□□□ -1.26
SCAMP1-204ENST00000511551 DTWD1Q8N5C7 304 aa7.2□□□□□ -1.26
SCAMP1-204ENST00000511551 TSEN2Q8NCE0 465 aaKnown RBP7.2□□□□□ -1.26
SCAMP1-204ENST00000511551 ADAMTS19Q8TE59 1207 aa7.2□□□□□ -1.26
SCAMP1-204ENST00000511551 IGFLR1Q9H665 355 aa7.2□□□□□ -1.26
SCAMP1-204ENST00000511551 ATP9BO43861 1147 aa7.19□□□□□ -1.26
SCAMP1-204ENST00000511551 RGS9O75916 674 aaPredicted RBP7.19□□□□□ -1.26
SCAMP1-204ENST00000511551 TBC1D8BQ0IIM8 1120 aa7.19□□□□□ -1.26
SCAMP1-204ENST00000511551 CCINQ13939 588 aa7.19□□□□□ -1.26
SCAMP1-204ENST00000511551 UCN2Q96RP3 112 aa7.19□□□□□ -1.26
SCAMP1-204ENST00000511551 MKRN1Q9UHC7 482 aaKnown RBP7.19□□□□□ -1.26
SCAMP1-204ENST00000511551 DMGDHQ9UI17 866 aaKnown RBP7.19□□□□□ -1.26
SCAMP1-204ENST00000511551 USP21Q9UK80 565 aa7.19□□□□□ -1.26
SCAMP1-204ENST00000511551 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.19□□□□□ -1.26
SCAMP1-204ENST00000511551 GRIK5Q16478 980 aa7.18□□□□□ -1.26
SCAMP1-204ENST00000511551 PCSK7Q16549 785 aa7.18□□□□□ -1.26
SCAMP1-204ENST00000511551 MSL1Q68DK7 614 aa7.18□□□□□ -1.26
SCAMP1-204ENST00000511551 FBXO11Q86XK2 927 aa7.18□□□□□ -1.26
SCAMP1-204ENST00000511551 POM121Q96HA1 1249 aa7.18□□□□□ -1.26
SCAMP1-204ENST00000511551 MAP3K6O95382 1288 aa7.17□□□□□ -1.26
SCAMP1-204ENST00000511551 WFDC12Q8WWY7 111 aa7.17□□□□□ -1.26
SCAMP1-204ENST00000511551 TTC9Q92623 222 aa7.17□□□□□ -1.26
SCAMP1-204ENST00000511551 FRRS1LQ9P0K9 344 aa7.17□□□□□ -1.26
SCAMP1-204ENST00000511551 RNF112Q9ULX5 631 aa7.17□□□□□ -1.26
SCAMP1-204ENST00000511551 POM121CA8CG34 1229 aa7.16□□□□□ -1.26
SCAMP1-204ENST00000511551 TGFBR3LH3BV60 316 aa7.16□□□□□ -1.26
SCAMP1-204ENST00000511551 NFKB1P19838 968 aa7.16□□□□□ -1.26
SCAMP1-204ENST00000511551 HDGFL1Q5TGJ6 251 aa7.16□□□□□ -1.26
SCAMP1-204ENST00000511551 PNMA5Q96PV4 448 aa7.16□□□□□ -1.26
SCAMP1-204ENST00000511551 C11orf16Q9NQ32 467 aa7.16□□□□□ -1.26
SCAMP1-204ENST00000511551 BCS1LQ9Y276 419 aa7.16□□□□□ -1.26
SCAMP1-204ENST00000511551 GRNP28799 593 aaKnown RBP7.15□□□□□ -1.26
SCAMP1-204ENST00000511551 NOS3P29474 1203 aa7.15□□□□□ -1.26
SCAMP1-204ENST00000511551 RTN1Q16799 776 aa7.15□□□□□ -1.26
SCAMP1-204ENST00000511551 IGF2-ASQ6U949 168 aa7.15□□□□□ -1.26
SCAMP1-204ENST00000511551 FAM35AQ86V20 835 aa7.15□□□□□ -1.26
SCAMP1-204ENST00000511551 KRTAP19-1Q8IUB9 90 aa7.15□□□□□ -1.26
SCAMP1-204ENST00000511551 SCG3Q8WXD2 468 aaKnown RBP7.15□□□□□ -1.26
SCAMP1-204ENST00000511551 LPIN3Q9BQK8 851 aa7.15□□□□□ -1.26
SCAMP1-204ENST00000511551 ZBTB42B2RXF5 422 aa7.14□□□□□ -1.27
SCAMP1-204ENST00000511551 IREB2P48200 963 aaKnown RBP7.14□□□□□ -1.27
SCAMP1-204ENST00000511551 SLC51AQ86UW1 340 aa7.14□□□□□ -1.27
SCAMP1-204ENST00000511551 TRPM4Q8TD43 1214 aa7.14□□□□□ -1.27
SCAMP1-204ENST00000511551 ZNF594Q96JF6 807 aaPredicted RBP7.14□□□□□ -1.27
SCAMP1-204ENST00000511551 RBM19Q9Y4C8 960 aaKnown RBP7.14□□□□□ -1.27
SCAMP1-204ENST00000511551 RAD21O60216 631 aa7.13□□□□□ -1.27
SCAMP1-204ENST00000511551 INPP5BP32019 993 aa7.13□□□□□ -1.27
SCAMP1-204ENST00000511551 SEC13P55735 322 aa7.13□□□□□ -1.27
SCAMP1-204ENST00000511551 TPRNQ4KMQ1 711 aa7.13□□□□□ -1.27
SCAMP1-204ENST00000511551 PERM1Q5SV97 790 aa7.13□□□□□ -1.27
SCAMP1-204ENST00000511551 NGLY1Q96IV0 654 aa7.13□□□□□ -1.27
SCAMP1-204ENST00000511551 SLC24A1O60721 1099 aa7.12□□□□□ -1.27
SCAMP1-204ENST00000511551 CPB1P15086 417 aa7.12□□□□□ -1.27
SCAMP1-204ENST00000511551 EPB42P16452 691 aa7.12□□□□□ -1.27
SCAMP1-204ENST00000511551 CHMP7Q8WUX9 453 aaPredicted RBP7.12□□□□□ -1.27
SCAMP1-204ENST00000511551 KRTAP9-9Q9BYP9 154 aa7.12□□□□□ -1.27
SCAMP1-204ENST00000511551 KRTAP9-4Q9BYQ2 154 aa7.12□□□□□ -1.27
SCAMP1-204ENST00000511551 ZFATQ9P243 1243 aa7.12□□□□□ -1.27
SCAMP1-204ENST00000511551 DEAF1O75398 565 aaPredicted RBP7.11□□□□□ -1.27
SCAMP1-204ENST00000511551 PLAURQ03405 335 aa7.11□□□□□ -1.27
SCAMP1-204ENST00000511551 PRR23CQ6ZRP0 262 aa7.11□□□□□ -1.27
SCAMP1-204ENST00000511551 DHX32Q7L7V1 743 aaKnown RBP7.11□□□□□ -1.27
SCAMP1-204ENST00000511551 WFDC8Q8IUA0 241 aa7.11□□□□□ -1.27
SCAMP1-204ENST00000511551 DZIP1LQ8IYY4 767 aaKnown RBP7.11□□□□□ -1.27
SCAMP1-204ENST00000511551 MEGF10Q96KG7 1140 aa7.11□□□□□ -1.27
SCAMP1-204ENST00000511551 GOLGA2P5Q9HBQ8 144 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms