RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 SEC13P55735 322 aa6.88□□□□□ -1.31
TOPBP1-208ENST00000511439 SFSWAPQ12872 951 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-208ENST00000511439 TSEN2Q8NCE0 465 aaKnown RBP6.88□□□□□ -1.31
TOPBP1-208ENST00000511439 KCNH4Q9UQ05 1017 aa6.88□□□□□ -1.31
TOPBP1-208ENST00000511439 ATAD2Q6PL18 1390 aa6.87□□□□□ -1.31
TOPBP1-208ENST00000511439 SFI1A8K8P3 1242 aa6.87□□□□□ -1.31
TOPBP1-208ENST00000511439 CHRNA4P43681 627 aa6.87□□□□□ -1.31
TOPBP1-208ENST00000511439 TYRO3Q06418 890 aa6.87□□□□□ -1.31
TOPBP1-208ENST00000511439 LARP1Q6PKG0 1096 aaKnown RBP6.87□□□□□ -1.31
TOPBP1-208ENST00000511439 ALDH16A1Q8IZ83 802 aa6.87□□□□□ -1.31
TOPBP1-208ENST00000511439 SUSD3Q96L08 255 aa6.87□□□□□ -1.31
TOPBP1-208ENST00000511439 M0R082 166 aa6.86□□□□□ -1.31
TOPBP1-208ENST00000511439 APBA3O96018 575 aa6.86□□□□□ -1.31
TOPBP1-208ENST00000511439 FURINP09958 794 aa6.86□□□□□ -1.31
TOPBP1-208ENST00000511439 ADH7P40394 386 aa6.86□□□□□ -1.31
TOPBP1-208ENST00000511439 GATA4P43694 442 aa6.86□□□□□ -1.31
TOPBP1-208ENST00000511439 CCDC82Q8N4S0 544 aa6.86□□□□□ -1.31
TOPBP1-208ENST00000511439 ZNF417Q8TAU3 575 aa6.86□□□□□ -1.31
TOPBP1-208ENST00000511439 HSH2DQ96JZ2 352 aa6.86□□□□□ -1.31
TOPBP1-208ENST00000511439 NACC1Q96RE7 527 aa6.86□□□□□ -1.31
TOPBP1-208ENST00000511439 ZNF587Q96SQ5 575 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-208ENST00000511439 SLC30A3Q99726 388 aa6.86□□□□□ -1.31
TOPBP1-208ENST00000511439 C2orf49Q9BVC5 232 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-208ENST00000511439 TFIP11Q9UBB9 837 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-208ENST00000511439 MAFBQ9Y5Q3 323 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-208ENST00000511439 NCAPD3P42695 1498 aa6.85□□□□□ -1.31
TOPBP1-208ENST00000511439 DKK1O94907 266 aa6.85□□□□□ -1.31
TOPBP1-208ENST00000511439 SCG3Q8WXD2 468 aaKnown RBP6.85□□□□□ -1.31
TOPBP1-208ENST00000511439 LAMC3Q9Y6N6 1575 aa6.84□□□□□ -1.31
TOPBP1-208ENST00000511439 C21orf2O43822 256 aa6.84□□□□□ -1.31
TOPBP1-208ENST00000511439 TRIM28Q13263 835 aaKnown RBP6.84□□□□□ -1.31
TOPBP1-208ENST00000511439 IER5Q5VY09 327 aa6.84□□□□□ -1.31
TOPBP1-208ENST00000511439 BTLAQ7Z6A9 289 aa6.84□□□□□ -1.31
TOPBP1-208ENST00000511439 MICALL1Q8N3F8 863 aa6.84□□□□□ -1.31
TOPBP1-208ENST00000511439 SERPINA10Q9UK55 444 aa6.84□□□□□ -1.31
TOPBP1-208ENST00000511439 PDS5BQ9NTI5 1447 aa6.84□□□□□ -1.32
TOPBP1-208ENST00000511439 KIF21AQ7Z4S6 1674 aa6.84□□□□□ -1.32
TOPBP1-208ENST00000511439 RTN1Q16799 776 aa6.83□□□□□ -1.32
TOPBP1-208ENST00000511439 ZNF280CQ8ND82 737 aa6.83□□□□□ -1.32
TOPBP1-208ENST00000511439 CHMP7Q8WUX9 453 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-208ENST00000511439 CCDC97Q96F63 343 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-208ENST00000511439 HINFPQ9BQA5 517 aa6.83□□□□□ -1.32
TOPBP1-208ENST00000511439 ARAP1Q96P48 1450 aa6.83□□□□□ -1.32
TOPBP1-208ENST00000511439 WDR62O43379 1518 aa6.82□□□□□ -1.32
TOPBP1-208ENST00000511439 FAM196BA6NMK8 535 aa6.82□□□□□ -1.32
TOPBP1-208ENST00000511439 LILRB5O75023 590 aa6.82□□□□□ -1.32
TOPBP1-208ENST00000511439 ALBP02768 609 aa6.82□□□□□ -1.32
TOPBP1-208ENST00000511439 EPB42P16452 691 aa6.82□□□□□ -1.32
TOPBP1-208ENST00000511439 IGFBP4P22692 258 aa6.82□□□□□ -1.32
TOPBP1-208ENST00000511439 RAB44Q7Z6P3 723 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-208ENST00000511439 BHMTQ93088 406 aa6.82□□□□□ -1.32
TOPBP1-208ENST00000511439 PPP1R12CQ9BZL4 782 aa6.82□□□□□ -1.32
TOPBP1-208ENST00000511439 STARD13Q9Y3M8 1113 aa6.82□□□□□ -1.32
TOPBP1-208ENST00000511439 MRC2Q9UBG0 1479 aa6.81□□□□□ -1.32
TOPBP1-208ENST00000511439 TGFBR3LH3BV60 316 aa6.81□□□□□ -1.32
TOPBP1-208ENST00000511439 PTK7Q13308 1070 aa6.81□□□□□ -1.32
TOPBP1-208ENST00000511439 PCSK7Q16549 785 aa6.81□□□□□ -1.32
TOPBP1-208ENST00000511439 FBXO41Q8TF61 875 aa6.81□□□□□ -1.32
TOPBP1-208ENST00000511439 NGLY1Q96IV0 654 aa6.81□□□□□ -1.32
TOPBP1-208ENST00000511439 PNMA5Q96PV4 448 aa6.81□□□□□ -1.32
TOPBP1-208ENST00000511439 UBE2OQ9C0C9 1292 aaKnown RBP6.81□□□□□ -1.32
TOPBP1-208ENST00000511439 NID1P14543 1247 aa6.8□□□□□ -1.32
TOPBP1-208ENST00000511439 DPYDQ12882 1025 aa6.8□□□□□ -1.32
TOPBP1-208ENST00000511439 DOC2BQ14184 412 aa6.8□□□□□ -1.32
TOPBP1-208ENST00000511439 ERCC6L2Q5T890 1561 aa6.8□□□□□ -1.32
TOPBP1-208ENST00000511439 C20orf204Q6ZNR8 217 aa6.8□□□□□ -1.32
TOPBP1-208ENST00000511439 ANKMY2Q8IV38 441 aa6.8□□□□□ -1.32
TOPBP1-208ENST00000511439 VRTNQ9H8Y1 702 aa6.8□□□□□ -1.32
TOPBP1-208ENST00000511439 USP17L15C9J2P7 530 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 USP17L10C9JJH3 530 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 USP17L13C9JLJ4 530 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 USP17L12C9JPN9 530 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 USP17L11C9JVI0 530 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 USP17L21D6R901 530 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 USP17L18D6R9N7 530 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 USP17L22D6RA61 530 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 USP17L17D6RBQ6 530 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 USP17L19D6RCP7 530 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 USP17L20D6RJB6 530 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 USP17L24Q0WX57 530 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 CCINQ13939 588 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 COL9A3Q14050 684 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 CRTC2Q53ET0 693 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 CFAP70Q5T0N1 1121 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 TRAPPC3LQ5T215 181 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 KANK4Q5T7N3 995 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 ARID3AQ99856 593 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 C11orf16Q9NQ32 467 aa6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.79□□□□□ -1.32
TOPBP1-208ENST00000511439 C9orf172C9J069 976 aa6.78□□□□□ -1.32
TOPBP1-208ENST00000511439 FOXO3O43524 673 aa6.78□□□□□ -1.32
TOPBP1-208ENST00000511439 TBC1D8BQ0IIM8 1120 aa6.78□□□□□ -1.32
TOPBP1-208ENST00000511439 XP32Q5T750 250 aa6.78□□□□□ -1.32
TOPBP1-208ENST00000511439 GSX2Q9BZM3 304 aa6.78□□□□□ -1.32
TOPBP1-208ENST00000511439 SEMA6BQ9H3T3 888 aa6.78□□□□□ -1.32
TOPBP1-208ENST00000511439 SLC6A14Q9UN76 642 aa6.78□□□□□ -1.32
TOPBP1-208ENST00000511439 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-208ENST00000511439 HMGXB3Q12766 1538 aa6.77□□□□□ -1.33
TOPBP1-208ENST00000511439 LMOD1P29536 600 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-208ENST00000511439 RAC1P63000 192 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms