RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 ARSDP51689 593 aa8.61□□□□□ -1.03
HMGB1P47-201ENST00000511281 SF3A1Q15459 793 aaKnown RBP8.61□□□□□ -1.03
HMGB1P47-201ENST00000511281 RNF217Q8TC41 542 aa8.61□□□□□ -1.03
HMGB1P47-201ENST00000511281 HPS1Q92902 700 aa8.61□□□□□ -1.03
HMGB1P47-201ENST00000511281 CTSOP43234 321 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P47-201ENST00000511281 IDH3AP50213 366 aa8.6□□□□□ -1.03
HMGB1P47-201ENST00000511281 ZNF280CQ8ND82 737 aa8.6□□□□□ -1.03
HMGB1P47-201ENST00000511281 RNF34Q969K3 372 aa8.6□□□□□ -1.03
HMGB1P47-201ENST00000511281 TGIF2Q9GZN2 237 aa8.6□□□□□ -1.03
HMGB1P47-201ENST00000511281 SPG7Q9UQ90 795 aa8.6□□□□□ -1.03
HMGB1P47-201ENST00000511281 TNFRSF10AO00220 468 aa8.59□□□□□ -1.03
HMGB1P47-201ENST00000511281 TNFRSF21O75509 655 aa8.59□□□□□ -1.03
HMGB1P47-201ENST00000511281 CTSHP09668 335 aa8.59□□□□□ -1.03
HMGB1P47-201ENST00000511281 C8orf34Q49A92 452 aa8.59□□□□□ -1.03
HMGB1P47-201ENST00000511281 BTLAQ7Z6A9 289 aa8.59□□□□□ -1.03
HMGB1P47-201ENST00000511281 NT5DC4Q86YG4 428 aa8.59□□□□□ -1.03
HMGB1P47-201ENST00000511281 TTC16Q8NEE8 873 aa8.59□□□□□ -1.03
HMGB1P47-201ENST00000511281 SNX29Q8TEQ0 813 aa8.59□□□□□ -1.03
HMGB1P47-201ENST00000511281 KLRG1Q96E93 195 aa8.59□□□□□ -1.03
HMGB1P47-201ENST00000511281 ZIC5Q96T25 663 aa8.59□□□□□ -1.03
HMGB1P47-201ENST00000511281 POLMQ9NP87 494 aaPredicted RBP8.59□□□□□ -1.03
HMGB1P47-201ENST00000511281 FNDC3AQ9Y2H6 1198 aaKnown RBP8.59□□□□□ -1.03
HMGB1P47-201ENST00000511281 A0A1B0GTH6 734 aa8.58□□□□□ -1.04
HMGB1P47-201ENST00000511281 UPP2O95045 317 aa8.58□□□□□ -1.04
HMGB1P47-201ENST00000511281 EGFRP00533 1210 aa8.58□□□□□ -1.04
HMGB1P47-201ENST00000511281 ZNF76P36508 570 aa8.58□□□□□ -1.04
HMGB1P47-201ENST00000511281 HSH2DQ96JZ2 352 aa8.58□□□□□ -1.04
HMGB1P47-201ENST00000511281 PLA2G2EQ9NZK7 142 aa8.58□□□□□ -1.04
HMGB1P47-201ENST00000511281 KCNMB2Q9Y691 235 aa8.58□□□□□ -1.04
HMGB1P47-201ENST00000511281 POTECB2RU33 542 aa8.57□□□□□ -1.04
HMGB1P47-201ENST00000511281 CAPN5O15484 640 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P47-201ENST00000511281 PTPN12Q05209 780 aaKnown RBP8.57□□□□□ -1.04
HMGB1P47-201ENST00000511281 POU4F2Q12837 409 aa8.57□□□□□ -1.04
HMGB1P47-201ENST00000511281 TRIP4Q15650 581 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P47-201ENST00000511281 LYSMD3Q7Z3D4 306 aa8.57□□□□□ -1.04
HMGB1P47-201ENST00000511281 SLC43A3Q8NBI5 491 aa8.57□□□□□ -1.04
HMGB1P47-201ENST00000511281 AIDAQ96BJ3 306 aa8.57□□□□□ -1.04
HMGB1P47-201ENST00000511281 CRISPLD1Q9H336 500 aa8.57□□□□□ -1.04
HMGB1P47-201ENST00000511281 RTCBQ9Y3I0 505 aaKnown RBP8.57□□□□□ -1.04
HMGB1P47-201ENST00000511281 A6NHS1 94 aa8.56□□□□□ -1.04
HMGB1P47-201ENST00000511281 PHKA2P46019 1235 aa8.56□□□□□ -1.04
HMGB1P47-201ENST00000511281 UBXN4Q92575 508 aa8.56□□□□□ -1.04
HMGB1P47-201ENST00000511281 TINF2Q9BSI4 451 aa8.56□□□□□ -1.04
HMGB1P47-201ENST00000511281 SRCIN1Q9C0H9 1055 aa8.56□□□□□ -1.04
HMGB1P47-201ENST00000511281 C12orf49Q9H741 205 aa8.56□□□□□ -1.04
HMGB1P47-201ENST00000511281 ZFYVE28Q9HCC9 887 aa8.56□□□□□ -1.04
HMGB1P47-201ENST00000511281 EIF4BP23588 611 aaKnown RBP8.55□□□□□ -1.04
HMGB1P47-201ENST00000511281 GRNP28799 593 aaKnown RBP8.55□□□□□ -1.04
HMGB1P47-201ENST00000511281 TYRO3Q06418 890 aa8.55□□□□□ -1.04
HMGB1P47-201ENST00000511281 SAMD5Q5TGI4 173 aa8.55□□□□□ -1.04
HMGB1P47-201ENST00000511281 C9orf131Q5VYM1 1079 aa8.55□□□□□ -1.04
HMGB1P47-201ENST00000511281 CCDC74AQ96AQ1 378 aa8.55□□□□□ -1.04
HMGB1P47-201ENST00000511281 AVPP01185 164 aa8.54□□□□□ -1.04
HMGB1P47-201ENST00000511281 EPB42P16452 691 aa8.54□□□□□ -1.04
HMGB1P47-201ENST00000511281 MSX1P28360 303 aa8.54□□□□□ -1.04
HMGB1P47-201ENST00000511281 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.54□□□□□ -1.04
HMGB1P47-201ENST00000511281 MRPL14Q6P1L8 145 aaKnown RBP8.54□□□□□ -1.04
HMGB1P47-201ENST00000511281 BICDL1Q6ZP65 573 aa8.54□□□□□ -1.04
HMGB1P47-201ENST00000511281 ZNF438Q7Z4V0 828 aa8.54□□□□□ -1.04
HMGB1P47-201ENST00000511281 ELP3Q9H9T3 547 aa8.54□□□□□ -1.04
HMGB1P47-201ENST00000511281 FOXD3Q9UJU5 478 aaPredicted RBP8.54□□□□□ -1.04
HMGB1P47-201ENST00000511281 USP31Q70CQ4 1352 aa8.53□□□□□ -1.04
HMGB1P47-201ENST00000511281 UBAP1LF5GYI3 381 aa8.53□□□□□ -1.04
HMGB1P47-201ENST00000511281 PRICKLE2Q7Z3G6 844 aa8.53□□□□□ -1.04
HMGB1P47-201ENST00000511281 OSBPL7Q9BZF2 842 aa8.53□□□□□ -1.04
HMGB1P47-201ENST00000511281 TIMMDC1Q9NPL8 285 aa8.53□□□□□ -1.04
HMGB1P47-201ENST00000511281 A0A1W2PNR3 127 aa8.52□□□□□ -1.05
HMGB1P47-201ENST00000511281 TTLL8A6PVC2 850 aa8.52□□□□□ -1.05
HMGB1P47-201ENST00000511281 BMP2P12643 396 aa8.52□□□□□ -1.05
HMGB1P47-201ENST00000511281 VEGFBP49765 207 aa8.52□□□□□ -1.05
HMGB1P47-201ENST00000511281 ST13P50502 369 aaKnown RBP8.52□□□□□ -1.05
HMGB1P47-201ENST00000511281 KCNQ4P56696 695 aa8.52□□□□□ -1.05
HMGB1P47-201ENST00000511281 USPL1Q5W0Q7 1092 aa8.52□□□□□ -1.05
HMGB1P47-201ENST00000511281 LRRC69Q6ZNQ3 347 aa8.52□□□□□ -1.05
HMGB1P47-201ENST00000511281 NLRP8Q86W28 1048 aa8.52□□□□□ -1.05
HMGB1P47-201ENST00000511281 GMLQ99445 158 aa8.52□□□□□ -1.05
HMGB1P47-201ENST00000511281 CHRDQ9H2X0 955 aa8.52□□□□□ -1.05
HMGB1P47-201ENST00000511281 NLRP2Q9NX02 1062 aa8.52□□□□□ -1.05
HMGB1P47-201ENST00000511281 FAM8A1Q9UBU6 413 aa8.52□□□□□ -1.05
HMGB1P47-201ENST00000511281 SOS2Q07890 1332 aaPredicted RBP8.52□□□□□ -1.05
HMGB1P47-201ENST00000511281 PHACTR2O75167 634 aa8.51□□□□□ -1.05
HMGB1P47-201ENST00000511281 GALNT12Q8IXK2 581 aa8.51□□□□□ -1.05
HMGB1P47-201ENST00000511281 CCSER2Q9H7U1 834 aa8.51□□□□□ -1.05
HMGB1P47-201ENST00000511281 NEUROD4Q9HD90 331 aa8.51□□□□□ -1.05
HMGB1P47-201ENST00000511281 TMEM63CQ9P1W3 806 aa8.51□□□□□ -1.05
HMGB1P47-201ENST00000511281 DDX41Q9UJV9 622 aaKnown RBP8.51□□□□□ -1.05
HMGB1P47-201ENST00000511281 DYRK1BQ9Y463 629 aa8.51□□□□□ -1.05
HMGB1P47-201ENST00000511281 SMCPP49901 116 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P47-201ENST00000511281 LBRQ14739 615 aaKnown RBP8.5□□□□□ -1.05
HMGB1P47-201ENST00000511281 ARSJQ5FYB0 599 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P47-201ENST00000511281 CMTR1Q8N1G2 835 aaKnown RBP8.5□□□□□ -1.05
HMGB1P47-201ENST00000511281 EPS8L3Q8TE67 593 aaKnown RBP8.5□□□□□ -1.05
HMGB1P47-201ENST00000511281 PMEPA1Q969W9 287 aa8.5□□□□□ -1.05
HMGB1P47-201ENST00000511281 ARMC5Q96C12 935 aa8.5□□□□□ -1.05
HMGB1P47-201ENST00000511281 USP20Q9Y2K6 914 aa8.5□□□□□ -1.05
HMGB1P47-201ENST00000511281 XYLBO75191 536 aa8.49□□□□□ -1.05
HMGB1P47-201ENST00000511281 PI16Q6UXB8 463 aa8.49□□□□□ -1.05
HMGB1P47-201ENST00000511281 NLRP13Q86W25 1043 aa8.49□□□□□ -1.05
HMGB1P47-201ENST00000511281 ABI2Q9NYB9 513 aaPredicted RBP8.49□□□□□ -1.05
HMGB1P47-201ENST00000511281 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms