RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 GCP02774 474 aa9.37□□□□□ -0.91
CLCN3-207ENST00000511092 CNTROBQ8N137 903 aa9.37□□□□□ -0.91
CLCN3-207ENST00000511092 ANKK1Q8NFD2 765 aa9.37□□□□□ -0.91
CLCN3-207ENST00000511092 LOC105371045A0A1W2PR82 267 aa9.36□□□□□ -0.91
CLCN3-207ENST00000511092 NFKBIEO00221 500 aa9.36□□□□□ -0.91
CLCN3-207ENST00000511092 PTPN5P54829 565 aa9.36□□□□□ -0.91
CLCN3-207ENST00000511092 KANK4Q5T7N3 995 aaPredicted RBP9.36□□□□□ -0.91
CLCN3-207ENST00000511092 Q7L0L9 218 aa9.36□□□□□ -0.91
CLCN3-207ENST00000511092 DDX21Q9NR30 783 aaKnown RBP eCLIP9.36□□□□□ -0.91
CLCN3-207ENST00000511092 VPS8Q8N3P4 1428 aa9.36□□□□□ -0.91
CLCN3-207ENST00000511092 SYNGAP1Q96PV0 1343 aa9.35□□□□□ -0.91
CLCN3-207ENST00000511092 MAP3K12Q12852 859 aa9.34□□□□□ -0.91
CLCN3-207ENST00000511092 CST9Q5W186 159 aa9.34□□□□□ -0.91
CLCN3-207ENST00000511092 PACS2Q86VP3 889 aa9.34□□□□□ -0.91
CLCN3-207ENST00000511092 COL26A1Q96A83 441 aa9.34□□□□□ -0.91
CLCN3-207ENST00000511092 CDCA7LQ96GN5 454 aa9.34□□□□□ -0.91
CLCN3-207ENST00000511092 CDHR5Q9HBB8 845 aa9.34□□□□□ -0.91
CLCN3-207ENST00000511092 STXBP5LQ9Y2K9 1186 aa9.34□□□□□ -0.91
CLCN3-207ENST00000511092 TLL2Q9Y6L7 1015 aa9.34□□□□□ -0.91
CLCN3-207ENST00000511092 ANKRD36BQ8N2N9 1353 aa9.34□□□□□ -0.91
CLCN3-207ENST00000511092 ADGRF5Q8IZF2 1346 aa9.33□□□□□ -0.92
CLCN3-207ENST00000511092 UNC79Q9P2D8 2635 aa9.33□□□□□ -0.92
CLCN3-207ENST00000511092 SOWAHBA6NEL2 793 aa9.33□□□□□ -0.92
CLCN3-207ENST00000511092 CSB-PGBD3P0DP91 1061 aa9.33□□□□□ -0.92
CLCN3-207ENST00000511092 PRSS12P56730 875 aa9.33□□□□□ -0.92
CLCN3-207ENST00000511092 ZFRQ96KR1 1074 aaKnown RBP9.33□□□□□ -0.92
CLCN3-207ENST00000511092 AK7Q96M32 723 aa9.33□□□□□ -0.92
CLCN3-207ENST00000511092 CCDC87Q9NVE4 849 aa9.33□□□□□ -0.92
CLCN3-207ENST00000511092 CCDC7Q96M83 1385 aa9.33□□□□□ -0.92
CLCN3-207ENST00000511092 CACNA1SQ13698 1873 aa9.32□□□□□ -0.92
CLCN3-207ENST00000511092 TRAF5O00463 557 aa9.32□□□□□ -0.92
CLCN3-207ENST00000511092 ABTB2Q8N961 1025 aa9.32□□□□□ -0.92
CLCN3-207ENST00000511092 MAP2P11137 1827 aaKnown RBP9.32□□□□□ -0.92
CLCN3-207ENST00000511092 CPSF1Q10570 1443 aaKnown RBP9.31□□□□□ -0.92
CLCN3-207ENST00000511092 SMYD5Q6GMV2 418 aa9.31□□□□□ -0.92
CLCN3-207ENST00000511092 NYAP1Q6ZVC0 841 aa9.31□□□□□ -0.92
CLCN3-207ENST00000511092 PRAM1Q96QH2 718 aa9.31□□□□□ -0.92
CLCN3-207ENST00000511092 SEPT9Q9UHD8 586 aaPredicted RBP9.31□□□□□ -0.92
CLCN3-207ENST00000511092 MUC6Q6W4X9 2439 aa9.31□□□□□ -0.92
CLCN3-207ENST00000511092 NSD3Q9BZ95 1437 aa9.31□□□□□ -0.92
CLCN3-207ENST00000511092 USP47Q96K76 1375 aa9.3□□□□□ -0.92
CLCN3-207ENST00000511092 ALYREFQ86V81 257 aaKnown RBP9.3□□□□□ -0.92
CLCN3-207ENST00000511092 PRO3102Q9H379 93 aa9.3□□□□□ -0.92
CLCN3-207ENST00000511092 TESPA1A2RU30 521 aaPredicted RBP9.29□□□□□ -0.92
CLCN3-207ENST00000511092 EN2P19622 333 aaPredicted RBP9.29□□□□□ -0.92
CLCN3-207ENST00000511092 ERFEQ4G0M1 354 aa9.29□□□□□ -0.92
CLCN3-207ENST00000511092 DEFB123Q8N688 67 aa9.29□□□□□ -0.92
CLCN3-207ENST00000511092 NPDC1Q9NQX5 325 aaPredicted RBP9.29□□□□□ -0.92
CLCN3-207ENST00000511092 ITGB4P16144 1822 aa9.28□□□□□ -0.92
CLCN3-207ENST00000511092 AFDNP55196 1824 aaKnown RBP9.28□□□□□ -0.92
CLCN3-207ENST00000511092 IQCA1LA6NCM1 817 aa9.28□□□□□ -0.92
CLCN3-207ENST00000511092 PPEF1O14829 653 aaPredicted RBP9.28□□□□□ -0.92
CLCN3-207ENST00000511092 TRPA1O75762 1119 aa9.28□□□□□ -0.92
CLCN3-207ENST00000511092 BCAMP50895 628 aa9.28□□□□□ -0.92
CLCN3-207ENST00000511092 NBPF1Q3BBV0 1214 aa9.28□□□□□ -0.92
CLCN3-207ENST00000511092 DDX54Q8TDD1 881 aaKnown RBP9.28□□□□□ -0.92
CLCN3-207ENST00000511092 SAPCD2Q86UD0 394 aa9.27□□□□□ -0.93
CLCN3-207ENST00000511092 CACNA1BQ00975 2339 aa9.27□□□□□ -0.93
CLCN3-207ENST00000511092 NBPF26B4DH59 902 aa9.26□□□□□ -0.93
CLCN3-207ENST00000511092 SMAPO00193 183 aa9.26□□□□□ -0.93
CLCN3-207ENST00000511092 SSFA2P28290 1259 aa9.26□□□□□ -0.93
CLCN3-207ENST00000511092 EPHX2P34913 555 aa9.26□□□□□ -0.93
CLCN3-207ENST00000511092 SYNE4Q8N205 404 aa9.26□□□□□ -0.93
CLCN3-207ENST00000511092 RNF186Q9NXI6 227 aa9.26□□□□□ -0.93
CLCN3-207ENST00000511092 FAM198AQ9UFP1 575 aa9.26□□□□□ -0.93
CLCN3-207ENST00000511092 PNMA3Q9UL41 463 aa9.26□□□□□ -0.93
CLCN3-207ENST00000511092 PALLDQ8WX93 1383 aa9.25□□□□□ -0.93
CLCN3-207ENST00000511092 IL2RBP14784 551 aa9.25□□□□□ -0.93
CLCN3-207ENST00000511092 PADI6Q6TGC4 694 aa9.25□□□□□ -0.93
CLCN3-207ENST00000511092 TATDN2Q93075 761 aa9.25□□□□□ -0.93
CLCN3-207ENST00000511092 MTMR10Q9NXD2 777 aa9.25□□□□□ -0.93
CLCN3-207ENST00000511092 SAGE1Q9NXZ1 904 aa9.25□□□□□ -0.93
CLCN3-207ENST00000511092 NUP155O75694 1391 aa9.24□□□□□ -0.93
CLCN3-207ENST00000511092 RGS20O76081 388 aa9.24□□□□□ -0.93
CLCN3-207ENST00000511092 PTGDRQ13258 359 aa9.24□□□□□ -0.93
CLCN3-207ENST00000511092 LINC00116Q8NCU8 138 aa9.24□□□□□ -0.93
CLCN3-207ENST00000511092 SIRT1Q96EB6 747 aa9.24□□□□□ -0.93
CLCN3-207ENST00000511092 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.24□□□□□ -0.93
CLCN3-207ENST00000511092 RNF123Q5XPI4 1314 aa9.24□□□□□ -0.93
CLCN3-207ENST00000511092 ZNF541Q9H0D2 1346 aa9.24□□□□□ -0.93
CLCN3-207ENST00000511092 POLR3AO14802 1390 aaPredicted RBP9.24□□□□□ -0.93
CLCN3-207ENST00000511092 PKN2Q16513 984 aaKnown RBP9.23□□□□□ -0.93
CLCN3-207ENST00000511092 AKAP4Q5JQC9 854 aa9.23□□□□□ -0.93
CLCN3-207ENST00000511092 RBM26Q5T8P6 1007 aaKnown RBP9.23□□□□□ -0.93
CLCN3-207ENST00000511092 FBXO46Q6PJ61 603 aaPredicted RBP9.23□□□□□ -0.93
CLCN3-207ENST00000511092 NUDT18Q6ZVK8 323 aa9.23□□□□□ -0.93
CLCN3-207ENST00000511092 NLRP13Q86W25 1043 aa9.23□□□□□ -0.93
CLCN3-207ENST00000511092 TTC13Q8NBP0 860 aa9.23□□□□□ -0.93
CLCN3-207ENST00000511092 HACL1Q9UJ83 578 aa9.23□□□□□ -0.93
CLCN3-207ENST00000511092 ACEP12821 1306 aa9.23□□□□□ -0.93
CLCN3-207ENST00000511092 EIF3AQ14152 1382 aaKnown RBP9.23□□□□□ -0.93
CLCN3-207ENST00000511092 PIK3C2GO75747 1445 aa9.22□□□□□ -0.93
CLCN3-207ENST00000511092 COL11A2P13942 1736 aaPredicted RBP9.22□□□□□ -0.93
CLCN3-207ENST00000511092 BDP1A6H8Y1 2624 aa9.22□□□□□ -0.93
CLCN3-207ENST00000511092 GNPATO15228 680 aa9.22□□□□□ -0.93
CLCN3-207ENST00000511092 TSR3Q9UJK0 312 aaKnown RBP9.22□□□□□ -0.93
CLCN3-207ENST00000511092 PARP3Q9Y6F1 533 aa9.22□□□□□ -0.93
CLCN3-207ENST00000511092 MON2Q7Z3U7 1717 aa9.22□□□□□ -0.93
CLCN3-207ENST00000511092 NCOR1O75376 2440 aa9.22□□□□□ -0.93
CLCN3-207ENST00000511092 LTN1O94822 1766 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms