RNA–Protein interactions for RNA: ENST00000510801.5

COPS4-208, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 381 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-208ENST00000510801 ABCC12Q96J65 1359 aa16■□□□□ 0.15
COPS4-208ENST00000510801 GTF2E1P29083 439 aaPredicted RBP16■□□□□ 0.15
COPS4-208ENST00000510801 SLFN5Q08AF3 891 aa16■□□□□ 0.15
COPS4-208ENST00000510801 ZNF428Q96B54 188 aa16■□□□□ 0.15
COPS4-208ENST00000510801 ALDH1B1P30837 517 aa15.99■□□□□ 0.15
COPS4-208ENST00000510801 ERFEQ4G0M1 354 aa15.99■□□□□ 0.15
COPS4-208ENST00000510801 SOGA3Q5TF21 947 aa15.99■□□□□ 0.15
COPS4-208ENST00000510801 KSR2Q6VAB6 950 aa15.99■□□□□ 0.15
COPS4-208ENST00000510801 CCDC24Q8N4L8 307 aa15.99■□□□□ 0.15
COPS4-208ENST00000510801 C7orf43Q8WVR3 580 aa15.99■□□□□ 0.15
COPS4-208ENST00000510801 METTL22Q9BUU2 404 aaPredicted RBP15.99■□□□□ 0.15
COPS4-208ENST00000510801 CHD4Q14839 1912 aa15.99■□□□□ 0.15
COPS4-208ENST00000510801 SH3TC1Q8TE82 1336 aa15.98■□□□□ 0.15
COPS4-208ENST00000510801 LTBP3Q9NS15 1303 aa15.98■□□□□ 0.15
COPS4-208ENST00000510801 SLC4A2P04920 1241 aa15.98■□□□□ 0.15
COPS4-208ENST00000510801 RIC3Q7Z5B4 369 aa15.98■□□□□ 0.15
COPS4-208ENST00000510801 NUTM1Q86Y26 1132 aa15.98■□□□□ 0.15
COPS4-208ENST00000510801 CCDC191Q8NCU4 936 aa15.98■□□□□ 0.15
COPS4-208ENST00000510801 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
COPS4-208ENST00000510801 PRPF40BQ6NWY9 871 aaKnown RBP15.97■□□□□ 0.15
COPS4-208ENST00000510801 ZNF622Q969S3 477 aaKnown RBP eCLIP15.97■□□□□ 0.151e-7■■□□□ 12.1
COPS4-208ENST00000510801 NLRP3Q96P20 1036 aa15.97■□□□□ 0.15
COPS4-208ENST00000510801 CRAMP1Q96RY5 1269 aa15.97■□□□□ 0.15
COPS4-208ENST00000510801 TRMT112Q9UI30 125 aaKnown RBP15.97■□□□□ 0.15
COPS4-208ENST00000510801 ZC3H4Q9UPT8 1303 aaKnown RBP15.96■□□□□ 0.15
COPS4-208ENST00000510801 ANKRD36CQ5JPF3 1778 aa15.96■□□□□ 0.15
COPS4-208ENST00000510801 PI4KAP2A4QPH2 592 aa15.96■□□□□ 0.15
COPS4-208ENST00000510801 HSP90B1P14625 803 aaKnown RBP15.96■□□□□ 0.15
COPS4-208ENST00000510801 FLIIQ13045 1269 aa15.96■□□□□ 0.15
COPS4-208ENST00000510801 ARHGAP27Q6ZUM4 889 aa15.96■□□□□ 0.15
COPS4-208ENST00000510801 PI4KAP1Q8N8J0 262 aa15.96■□□□□ 0.15
COPS4-208ENST00000510801 WWC3Q9ULE0 1092 aa15.96■□□□□ 0.15
COPS4-208ENST00000510801 COL11A2P13942 1736 aaPredicted RBP15.96■□□□□ 0.15
COPS4-208ENST00000510801 FAM177BA6PVY3 158 aa15.95■□□□□ 0.14
COPS4-208ENST00000510801 GRIPAP1Q4V328 841 aa15.95■□□□□ 0.14
COPS4-208ENST00000510801 CC2D2BQ6DHV5 1058 aa15.95■□□□□ 0.14
COPS4-208ENST00000510801 ZBTB38Q8NAP3 1195 aaPredicted RBP15.95■□□□□ 0.14
COPS4-208ENST00000510801 ZNF784Q8NCA9 323 aaPredicted RBP15.95■□□□□ 0.14
COPS4-208ENST00000510801 SF3B3Q15393 1217 aaKnown RBP15.94■□□□□ 0.14
COPS4-208ENST00000510801 G2E3Q7L622 706 aa15.94■□□□□ 0.14
COPS4-208ENST00000510801 MAP3K2Q9Y2U5 619 aa15.94■□□□□ 0.14
COPS4-208ENST00000510801 ATP5J2-PTCD1G3V325 749 aa15.93■□□□□ 0.14
COPS4-208ENST00000510801 NFKBIEO00221 500 aa15.93■□□□□ 0.14
COPS4-208ENST00000510801 PCCAP05165 728 aaPredicted RBP15.93■□□□□ 0.14
COPS4-208ENST00000510801 RPGRQ92834 1020 aaKnown RBP15.93■□□□□ 0.14
COPS4-208ENST00000510801 RBM17Q96I25 401 aaKnown RBP15.93■□□□□ 0.14
COPS4-208ENST00000510801 CWC25Q9NXE8 425 aaPredicted RBP15.93■□□□□ 0.14
COPS4-208ENST00000510801 SNED1Q8TER0 1413 aa15.93■□□□□ 0.14
COPS4-208ENST00000510801 ARFGEF2Q9Y6D5 1785 aa15.92■□□□□ 0.14
COPS4-208ENST00000510801 TNRC6CQ9HCJ0 1690 aaKnown RBP15.92■□□□□ 0.14
COPS4-208ENST00000510801 IGKV5-2P06315 115 aa15.92■□□□□ 0.14
COPS4-208ENST00000510801 LMNB1P20700 586 aa15.92■□□□□ 0.14
COPS4-208ENST00000510801 NEXNQ0ZGT2 675 aa15.92■□□□□ 0.14
COPS4-208ENST00000510801 C3orf67Q6ZVT6 689 aa15.92■□□□□ 0.14
COPS4-208ENST00000510801 MYD88Q99836 296 aa15.92■□□□□ 0.14
COPS4-208ENST00000510801 CACNA1FO60840 1977 aa15.91■□□□□ 0.14
COPS4-208ENST00000510801 C21orf2O43822 256 aa15.91■□□□□ 0.14
COPS4-208ENST00000510801 BBOX1O75936 387 aa15.91■□□□□ 0.14
COPS4-208ENST00000510801 BRPF1P55201 1214 aaPredicted RBP15.91■□□□□ 0.14
COPS4-208ENST00000510801 ALDH1L2Q3SY69 923 aa15.91■□□□□ 0.14
COPS4-208ENST00000510801 CCDC93Q567U6 631 aa15.91■□□□□ 0.14
COPS4-208ENST00000510801 RTKN2Q8IZC4 609 aa15.91■□□□□ 0.14
COPS4-208ENST00000510801 LINS1Q8NG48 757 aa15.91■□□□□ 0.14
COPS4-208ENST00000510801 DNAAF4Q8WXU2 420 aa15.91■□□□□ 0.14
COPS4-208ENST00000510801 FAM89AQ96GI7 184 aa15.91■□□□□ 0.14
COPS4-208ENST00000510801 CDCA7LQ96GN5 454 aa15.91■□□□□ 0.14
COPS4-208ENST00000510801 CDHR2Q9BYE9 1310 aa15.91■□□□□ 0.14
COPS4-208ENST00000510801 NEURL1BA8MQ27 555 aa15.9■□□□□ 0.14
COPS4-208ENST00000510801 HCLS1P14317 486 aaPredicted RBP15.9■□□□□ 0.14
COPS4-208ENST00000510801 FKBP5Q13451 457 aaPredicted RBP15.9■□□□□ 0.14
COPS4-208ENST00000510801 C9orf131Q5VYM1 1079 aa15.9■□□□□ 0.14
COPS4-208ENST00000510801 TMC4Q7Z404 712 aa15.9■□□□□ 0.14
COPS4-208ENST00000510801 SYNE4Q8N205 404 aa15.9■□□□□ 0.14
COPS4-208ENST00000510801 IRS4O14654 1257 aaPredicted RBP15.89■□□□□ 0.13
COPS4-208ENST00000510801 TCERG1O14776 1098 aaKnown RBP15.89■□□□□ 0.13
COPS4-208ENST00000510801 PSMD1Q99460 953 aa15.89■□□□□ 0.13
COPS4-208ENST00000510801 TAOK3Q9H2K8 898 aa15.89■□□□□ 0.13
COPS4-208ENST00000510801 SLX4Q8IY92 1834 aa15.89■□□□□ 0.13
COPS4-208ENST00000510801 H7C1W4 665 aa15.88■□□□□ 0.13
COPS4-208ENST00000510801 PRELPP51888 382 aa15.88■□□□□ 0.13
COPS4-208ENST00000510801 MRPL50Q8N5N7 158 aaKnown RBP15.88■□□□□ 0.13
COPS4-208ENST00000510801 PLA2G12BQ9BX93 195 aa15.88■□□□□ 0.13
COPS4-208ENST00000510801 ABCC4O15439 1325 aa15.88■□□□□ 0.13
COPS4-208ENST00000510801 PTPRCP08575 1304 aa15.88■□□□□ 0.13
COPS4-208ENST00000510801 PDE8AO60658 829 aa15.87■□□□□ 0.13
COPS4-208ENST00000510801 FKBP4Q02790 459 aaKnown RBP eCLIP15.87■□□□□ 0.13
COPS4-208ENST00000510801 RASSF7Q02833 373 aa15.87■□□□□ 0.13
COPS4-208ENST00000510801 GRAPQ13588 217 aa15.87■□□□□ 0.13
COPS4-208ENST00000510801 GCKRQ14397 625 aa15.87■□□□□ 0.13
COPS4-208ENST00000510801 BEND3Q5T5X7 828 aa15.87■□□□□ 0.13
COPS4-208ENST00000510801 DDX46Q7L014 1031 aaKnown RBP15.87■□□□□ 0.13
COPS4-208ENST00000510801 GRAPLQ8TC17 118 aaPredicted RBP15.87■□□□□ 0.13
COPS4-208ENST00000510801 VPS33BQ9H267 617 aa15.87■□□□□ 0.13
COPS4-208ENST00000510801 ATP6V0A2Q9Y487 856 aa15.87■□□□□ 0.13
COPS4-208ENST00000510801 PPEF1O14829 653 aaPredicted RBP15.86■□□□□ 0.13
COPS4-208ENST00000510801 CASP7P55210 303 aa15.86■□□□□ 0.13
COPS4-208ENST00000510801 SP8Q8IXZ3 490 aa15.86■□□□□ 0.13
COPS4-208ENST00000510801 SSH1Q8WYL5 1049 aa15.86■□□□□ 0.13
COPS4-208ENST00000510801 RNF181Q9P0P0 153 aa15.86■□□□□ 0.13
COPS4-208ENST00000510801 FER1L6Q2WGJ9 1857 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms