RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 RUFY3Q7L099 469 aa22.85■■□□□ 1.25
LIN54-209ENST00000510557 KIAA1524Q8TCG1 905 aa22.85■■□□□ 1.25
LIN54-209ENST00000510557 CASTP20810 708 aaKnown RBP22.84■■□□□ 1.25
LIN54-209ENST00000510557 ZNF771Q7L3S4 317 aaPredicted RBP22.84■■□□□ 1.25
LIN54-209ENST00000510557 KCNB2Q92953 911 aa22.84■■□□□ 1.25
LIN54-209ENST00000510557 OGFRQ9NZT2 677 aa22.84■■□□□ 1.25
LIN54-209ENST00000510557 SPG7Q9UQ90 795 aa22.84■■□□□ 1.25
LIN54-209ENST00000510557 HEG1Q9ULI3 1381 aa22.84■■□□□ 1.25
LIN54-209ENST00000510557 KDM4AO75164 1064 aa22.84■■□□□ 1.25
LIN54-209ENST00000510557 HCLS1P14317 486 aaPredicted RBP22.83■■□□□ 1.25
LIN54-209ENST00000510557 UBE2HP62256 183 aa22.83■■□□□ 1.25
LIN54-209ENST00000510557 GDPD2Q9HCC8 539 aa22.83■■□□□ 1.25
LIN54-209ENST00000510557 CYP46A1Q9Y6A2 500 aa22.83■■□□□ 1.25
LIN54-209ENST00000510557 ZKSCAN1P17029 563 aaPredicted RBP22.83■■□□□ 1.24
LIN54-209ENST00000510557 SYT1P21579 422 aa22.83■■□□□ 1.24
LIN54-209ENST00000510557 LINS1Q8NG48 757 aa22.83■■□□□ 1.24
LIN54-209ENST00000510557 PDRG1Q9NUG6 133 aa22.83■■□□□ 1.24
LIN54-209ENST00000510557 ANXA1P04083 346 aa22.82■■□□□ 1.24
LIN54-209ENST00000510557 LRRC59Q96AG4 307 aaKnown RBP22.82■■□□□ 1.24
LIN54-209ENST00000510557 ZSWIM6Q9HCJ5 1215 aa22.82■■□□□ 1.24
LIN54-209ENST00000510557 F13A1P00488 732 aa22.82■■□□□ 1.24
LIN54-209ENST00000510557 UTYO14607 1347 aa22.81■■□□□ 1.24
LIN54-209ENST00000510557 ARHGEF25Q86VW2 580 aa22.81■■□□□ 1.24
LIN54-209ENST00000510557 RGPD2P0DJD1 1756 aa22.81■■□□□ 1.24
LIN54-209ENST00000510557 GCP02774 474 aa22.8■■□□□ 1.24
LIN54-209ENST00000510557 GABPB1Q06547 395 aaPredicted RBP22.8■■□□□ 1.24
LIN54-209ENST00000510557 FOXD4L6Q3SYB3 417 aaPredicted RBP22.8■■□□□ 1.24
LIN54-209ENST00000510557 FOXD4L3Q6VB84 417 aaPredicted RBP22.8■■□□□ 1.24
LIN54-209ENST00000510557 LMTK3Q96Q04 1460 aa22.8■■□□□ 1.24
LIN54-209ENST00000510557 IGSF3O75054 1194 aa22.8■■□□□ 1.24
LIN54-209ENST00000510557 G3BP1Q13283 466 aaKnown RBP eCLIP22.8■■□□□ 1.24
LIN54-209ENST00000510557 JAKMIP1Q96N16 626 aaKnown RBP22.8■■□□□ 1.24
LIN54-209ENST00000510557 TMEM51Q9NW97 253 aa22.8■■□□□ 1.24
LIN54-209ENST00000510557 SETD1BQ9UPS6 1966 aaKnown RBP22.8■■□□□ 1.24
LIN54-209ENST00000510557 GRM8O00222 908 aa22.79■■□□□ 1.24
LIN54-209ENST00000510557 AACSQ86V21 672 aa22.79■■□□□ 1.24
LIN54-209ENST00000510557 PYCARDQ9ULZ3 195 aa22.79■■□□□ 1.24
LIN54-209ENST00000510557 PSMA5P28066 241 aa22.79■■□□□ 1.24
LIN54-209ENST00000510557 PRPF40BQ6NWY9 871 aaKnown RBP22.79■■□□□ 1.24
LIN54-209ENST00000510557 CGNQ9P2M7 1197 aaKnown RBP22.79■■□□□ 1.24
LIN54-209ENST00000510557 CNPY2Q9Y2B0 182 aa22.79■■□□□ 1.24
LIN54-209ENST00000510557 GOLGA6L6A8MZA4 724 aa22.78■■□□□ 1.24
LIN54-209ENST00000510557 NECTIN1Q15223 517 aa22.78■■□□□ 1.24
LIN54-209ENST00000510557 SYCP1Q15431 976 aa22.78■■□□□ 1.24
LIN54-209ENST00000510557 KCNF1Q9H3M0 494 aa22.78■■□□□ 1.24
LIN54-209ENST00000510557 DDX21Q9NR30 783 aaKnown RBP eCLIP22.78■■□□□ 1.24
LIN54-209ENST00000510557 TCHHQ07283 1943 aa22.78■■□□□ 1.24
LIN54-209ENST00000510557 CCDC171Q6TFL3 1326 aa22.78■■□□□ 1.24
LIN54-209ENST00000510557 SLIT3O75094 1523 aa22.78■■□□□ 1.24
LIN54-209ENST00000510557 ANKRD24Q8TF21 1146 aa22.78■■□□□ 1.24
LIN54-209ENST00000510557 PLCB2Q00722 1185 aa22.77■■□□□ 1.24
LIN54-209ENST00000510557 PTH1RQ03431 593 aa22.77■■□□□ 1.24
LIN54-209ENST00000510557 SNRKQ9NRH2 765 aa22.77■■□□□ 1.23
LIN54-209ENST00000510557 GJB2P29033 226 aa22.76■■□□□ 1.23
LIN54-209ENST00000510557 PROSER3Q2NL68 480 aa22.76■■□□□ 1.23
LIN54-209ENST00000510557 CWF19L2Q2TBE0 894 aaKnown RBP22.76■■□□□ 1.23
LIN54-209ENST00000510557 RNF20Q5VTR2 975 aa22.76■■□□□ 1.23
LIN54-209ENST00000510557 PA2G4Q9UQ80 394 aaKnown RBP22.76■■□□□ 1.23
LIN54-209ENST00000510557 PXDNQ92626 1479 aa22.75■■□□□ 1.23
LIN54-209ENST00000510557 KCNJ4P48050 445 aa22.75■■□□□ 1.23
LIN54-209ENST00000510557 NCBP1Q09161 790 aaKnown RBP22.75■■□□□ 1.23
LIN54-209ENST00000510557 ANKRD1Q15327 319 aa22.75■■□□□ 1.23
LIN54-209ENST00000510557 CCDC83Q8IWF9 413 aa22.75■■□□□ 1.23
LIN54-209ENST00000510557 MAP4K1Q92918 833 aa22.75■■□□□ 1.23
LIN54-209ENST00000510557 LARP1Q6PKG0 1096 aaKnown RBP22.74■■□□□ 1.23
LIN54-209ENST00000510557 CAMTA1Q9Y6Y1 1673 aa22.74■■□□□ 1.23
LIN54-209ENST00000510557 NEXNQ0ZGT2 675 aa22.74■■□□□ 1.23
LIN54-209ENST00000510557 SUCLG2Q96I99 432 aa22.74■■□□□ 1.23
LIN54-209ENST00000510557 RBM8AQ9Y5S9 174 aaKnown RBP22.74■■□□□ 1.23
LIN54-209ENST00000510557 ADCK5Q3MIX3 580 aa22.73■■□□□ 1.23
LIN54-209ENST00000510557 CREB3L3Q68CJ9 461 aa22.73■■□□□ 1.23
LIN54-209ENST00000510557 CTNNA3Q9UI47 895 aa22.73■■□□□ 1.23
LIN54-209ENST00000510557 SIPA1L3O60292 1781 aaPredicted RBP22.73■■□□□ 1.23
LIN54-209ENST00000510557 SASH1O94885 1247 aa22.73■■□□□ 1.23
LIN54-209ENST00000510557 BICC1Q9H694 974 aaKnown RBP22.73■■□□□ 1.23
LIN54-209ENST00000510557 MTMR6Q9Y217 621 aa22.73■■□□□ 1.23
LIN54-209ENST00000510557 CPA1P15085 419 aa22.72■■□□□ 1.23
LIN54-209ENST00000510557 PDCP20941 246 aa22.72■■□□□ 1.23
LIN54-209ENST00000510557 LARP6Q9BRS8 491 aaKnown RBP22.72■■□□□ 1.23
LIN54-209ENST00000510557 ALDH8A1Q9H2A2 487 aaPredicted RBP22.72■■□□□ 1.23
LIN54-209ENST00000510557 RIC3Q7Z5B4 369 aa22.71■■□□□ 1.23
LIN54-209ENST00000510557 EAF2Q96CJ1 260 aaPredicted RBP22.71■■□□□ 1.23
LIN54-209ENST00000510557 ADAMTS7Q9UKP4 1686 aa22.71■■□□□ 1.23
LIN54-209ENST00000510557 FIBPO43427 364 aa22.71■■□□□ 1.23
LIN54-209ENST00000510557 LARGE1O95461 756 aa22.71■■□□□ 1.23
LIN54-209ENST00000510557 FUCA2Q9BTY2 467 aa22.71■■□□□ 1.23
LIN54-209ENST00000510557 NMIQ13287 307 aaPredicted RBP22.7■■□□□ 1.22
LIN54-209ENST00000510557 SPC24Q8NBT2 197 aa22.7■■□□□ 1.22
LIN54-209ENST00000510557 KAZALD1Q96I82 304 aa22.7■■□□□ 1.22
LIN54-209ENST00000510557 SMTNL1A8MU46 457 aa22.7■■□□□ 1.22
LIN54-209ENST00000510557 ME3Q16798 604 aa22.7■■□□□ 1.22
LIN54-209ENST00000510557 HMG20BQ9P0W2 317 aa22.7■■□□□ 1.22
LIN54-209ENST00000510557 NAP1L2Q9ULW6 460 aaPredicted RBP22.7■■□□□ 1.22
LIN54-209ENST00000510557 AP5Z1O43299 807 aa22.69■■□□□ 1.22
LIN54-209ENST00000510557 RBM33Q96EV2 1170 aaKnown RBP22.69■■□□□ 1.22
LIN54-209ENST00000510557 DDX41Q9UJV9 622 aaKnown RBP22.69■■□□□ 1.22
LIN54-209ENST00000510557 ZNF142P52746 1687 aaPredicted RBP22.69■■□□□ 1.22
LIN54-209ENST00000510557 AIMP1Q12904 312 aaKnown RBP22.69■■□□□ 1.22
LIN54-209ENST00000510557 FSD1Q9BTV5 496 aa22.69■■□□□ 1.22
LIN54-209ENST00000510557 CCDC66A2RUB6 948 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms