RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 PCDHGA11Q9Y5H2 935 aa7.24□□□□□ -1.25
NEK1-204ENST00000509912 JCADQ9P266 1359 aa7.24□□□□□ -1.25
NEK1-204ENST00000509912 GOLGA8CPA6NN73 597 aa7.24□□□□□ -1.25
NEK1-204ENST00000509912 DXOO77932 396 aaKnown RBP7.24□□□□□ -1.25
NEK1-204ENST00000509912 NALCNQ8IZF0 1738 aa7.24□□□□□ -1.25
NEK1-204ENST00000509912 RGPD3A6NKT7 1758 aaPredicted RBP7.23□□□□□ -1.25
NEK1-204ENST00000509912 RGPD4Q7Z3J3 1758 aa7.23□□□□□ -1.25
NEK1-204ENST00000509912 ASXL1Q8IXJ9 1541 aa7.23□□□□□ -1.25
NEK1-204ENST00000509912 RECKO95980 971 aa7.23□□□□□ -1.25
NEK1-204ENST00000509912 WNT2BQ93097 391 aa7.23□□□□□ -1.25
NEK1-204ENST00000509912 SAP130Q9H0E3 1048 aa7.23□□□□□ -1.25
NEK1-204ENST00000509912 SOWAHBA6NEL2 793 aa7.23□□□□□ -1.25
NEK1-204ENST00000509912 HS3ST6Q96QI5 342 aa7.23□□□□□ -1.25
NEK1-204ENST00000509912 CRYBG1Q9Y4K1 1723 aa7.23□□□□□ -1.25
NEK1-204ENST00000509912 IDI1Q13907 227 aa7.23□□□□□ -1.25
NEK1-204ENST00000509912 ANKK1Q8NFD2 765 aa7.23□□□□□ -1.25
NEK1-204ENST00000509912 PIK3C2GO75747 1445 aa7.22□□□□□ -1.25
NEK1-204ENST00000509912 ITSN1Q15811 1721 aa7.22□□□□□ -1.25
NEK1-204ENST00000509912 SNPHO15079 494 aa7.22□□□□□ -1.25
NEK1-204ENST00000509912 SWI5Q1ZZU3 235 aa7.22□□□□□ -1.25
NEK1-204ENST00000509912 NBPF14Q5TI25 921 aa7.22□□□□□ -1.25
NEK1-204ENST00000509912 SH3BP5LQ7L8J4 393 aa7.22□□□□□ -1.25
NEK1-204ENST00000509912 LRPPRCP42704 1394 aaKnown RBP7.22□□□□□ -1.25
NEK1-204ENST00000509912 MSH6P52701 1360 aa7.22□□□□□ -1.25
NEK1-204ENST00000509912 PPEF1O14829 653 aaPredicted RBP7.22□□□□□ -1.25
NEK1-204ENST00000509912 LSM11P83369 360 aaKnown RBP eCLIP7.22□□□□□ -1.255e-8■■■■■ 34.7
NEK1-204ENST00000509912 LAPTM4BQ86VI4 370 aa7.22□□□□□ -1.25
NEK1-204ENST00000509912 BACH2Q9BYV9 841 aa7.22□□□□□ -1.25
NEK1-204ENST00000509912 ICMTO60725 284 aa7.21□□□□□ -1.25
NEK1-204ENST00000509912 NR1I2O75469 434 aa7.21□□□□□ -1.25
NEK1-204ENST00000509912 TNS4Q8IZW8 715 aa7.21□□□□□ -1.25
NEK1-204ENST00000509912 TOPAZ1Q8N9V7 1692 aa7.21□□□□□ -1.25
NEK1-204ENST00000509912 SLC4A5Q9BY07 1137 aa7.21□□□□□ -1.26
NEK1-204ENST00000509912 FCF1Q9Y324 198 aaKnown RBP7.21□□□□□ -1.26
NEK1-204ENST00000509912 PLEKHG2Q9H7P9 1386 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 LTKP29376 864 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 ZNF687Q8N1G0 1237 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 RAB6BQ9NRW1 208 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 SERTAD1Q9UHV2 236 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 PTPRUQ92729 1446 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 SBNO1A3KN83 1393 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 MPSTP25325 297 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 SH3RF1Q7Z6J0 888 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 ATCAYQ86WG3 371 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 SIX5Q8N196 739 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 C19orf44Q9H6X5 657 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 CCDC144AA2RUR9 1427 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 HRO43593 1189 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 ATP1A2P50993 1020 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 LARGE2Q8N3Y3 721 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 PUS7Q96PZ0 661 aaKnown RBP7.2□□□□□ -1.26
NEK1-204ENST00000509912 CHIC2Q9UKJ5 165 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 WWC3Q9ULE0 1092 aa7.2□□□□□ -1.26
NEK1-204ENST00000509912 ADGRB1O14514 1584 aa7.19□□□□□ -1.26
NEK1-204ENST00000509912 FAM26DQ5JW98 314 aa7.19□□□□□ -1.26
NEK1-204ENST00000509912 FBXO33Q7Z6M2 555 aa7.19□□□□□ -1.26
NEK1-204ENST00000509912 SLC10A4Q96EP9 437 aa7.19□□□□□ -1.26
NEK1-204ENST00000509912 CCDC87Q9NVE4 849 aa7.19□□□□□ -1.26
NEK1-204ENST00000509912 RBM19Q9Y4C8 960 aaKnown RBP7.19□□□□□ -1.26
NEK1-204ENST00000509912 TRPM3Q9HCF6 1732 aaPredicted RBP7.19□□□□□ -1.26
NEK1-204ENST00000509912 NUP155O75694 1391 aa7.19□□□□□ -1.26
NEK1-204ENST00000509912 S1PR4O95977 384 aa7.19□□□□□ -1.26
NEK1-204ENST00000509912 MAPK8P45983 427 aa7.19□□□□□ -1.26
NEK1-204ENST00000509912 PTPN5P54829 565 aa7.19□□□□□ -1.26
NEK1-204ENST00000509912 ARID5BQ14865 1188 aa7.19□□□□□ -1.26
NEK1-204ENST00000509912 TMC1Q8TDI8 760 aa7.19□□□□□ -1.26
NEK1-204ENST00000509912 TSPAN10Q9H1Z9 355 aaPredicted RBP7.19□□□□□ -1.26
NEK1-204ENST00000509912 TMPRSS4Q9NRS4 437 aa7.19□□□□□ -1.26
NEK1-204ENST00000509912 TSR3Q9UJK0 312 aaKnown RBP7.19□□□□□ -1.26
NEK1-204ENST00000509912 ABCA3Q99758 1704 aa7.18□□□□□ -1.26
NEK1-204ENST00000509912 C21orf2O43822 256 aa7.18□□□□□ -1.26
NEK1-204ENST00000509912 AAMPQ13685 434 aa7.18□□□□□ -1.26
NEK1-204ENST00000509912 MAMSTRQ6ZN01 415 aa7.18□□□□□ -1.26
NEK1-204ENST00000509912 TAS1R3Q7RTX0 852 aa7.18□□□□□ -1.26
NEK1-204ENST00000509912 FAM177A1Q8N128 213 aaPredicted RBP7.18□□□□□ -1.26
NEK1-204ENST00000509912 KCTD12Q96CX2 325 aaKnown RBP7.18□□□□□ -1.26
NEK1-204ENST00000509912 P4HBP07237 508 aaKnown RBP7.18□□□□□ -1.26
NEK1-204ENST00000509912 SCG3Q8WXD2 468 aaKnown RBP7.18□□□□□ -1.26
NEK1-204ENST00000509912 SALL2Q9Y467 1007 aaPredicted RBP7.18□□□□□ -1.26
NEK1-204ENST00000509912 TMEM94Q12767 1356 aa7.18□□□□□ -1.26
NEK1-204ENST00000509912 ALS2Q96Q42 1657 aa7.18□□□□□ -1.26
NEK1-204ENST00000509912 MMP16P51512 607 aa7.17□□□□□ -1.26
NEK1-204ENST00000509912 TRIM50Q86XT4 487 aa7.17□□□□□ -1.26
NEK1-204ENST00000509912 ATP7BP35670 1465 aa7.17□□□□□ -1.26
NEK1-204ENST00000509912 PXDNQ92626 1479 aa7.17□□□□□ -1.26
NEK1-204ENST00000509912 SMARCA5O60264 1052 aaPredicted RBP7.17□□□□□ -1.26
NEK1-204ENST00000509912 MAP7D1Q3KQU3 841 aa7.17□□□□□ -1.26
NEK1-204ENST00000509912 ZNF511Q8NB15 262 aa7.17□□□□□ -1.26
NEK1-204ENST00000509912 FAM163AQ96GL9 167 aaPredicted RBP7.17□□□□□ -1.26
NEK1-204ENST00000509912 MTRQ99707 1265 aa7.17□□□□□ -1.26
NEK1-204ENST00000509912 CYLDQ9NQC7 956 aa7.17□□□□□ -1.26
NEK1-204ENST00000509912 C11orf95C9JLR9 678 aaPredicted RBP7.17□□□□□ -1.26
NEK1-204ENST00000509912 TMC7Q7Z402 723 aa7.17□□□□□ -1.26
NEK1-204ENST00000509912 RRP7BPQ9NSQ0 103 aa7.17□□□□□ -1.26
NEK1-204ENST00000509912 SOS2Q07890 1332 aaPredicted RBP7.16□□□□□ -1.26
NEK1-204ENST00000509912 ZBTB39O15060 712 aa7.16□□□□□ -1.26
NEK1-204ENST00000509912 ZPR1O75312 459 aa7.16□□□□□ -1.26
NEK1-204ENST00000509912 SH3PXD2AQ5TCZ1 1133 aa7.16□□□□□ -1.26
NEK1-204ENST00000509912 PHRF1Q9P1Y6 1649 aaKnown RBP7.16□□□□□ -1.26
NEK1-204ENST00000509912 TMEM229AB2RXF0 380 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms