RNA–Protein interactions for RNA: ENST00000509869.5

SPOP-216, Transcript of speckle type BTB/POZ protein, human

TSL 5

Gene SPOP, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOP-216	ENST00000509869	NLRP10	Q86W26	655 aa		12.08	□□□□□ -0.48
SPOP-216	ENST00000509869	RPGR	Q92834	1020 aa	Known RBP	12.08	□□□□□ -0.48
SPOP-216	ENST00000509869	STK31	Q9BXU1	1019 aa		12.08	□□□□□ -0.48
SPOP-216	ENST00000509869	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.08	□□□□□ -0.48
SPOP-216	ENST00000509869	TRMT112	Q9UI30	125 aa	Known RBP	12.08	□□□□□ -0.48
SPOP-216	ENST00000509869	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.07	□□□□□ -0.48
SPOP-216	ENST00000509869	EXOSC9	Q06265	439 aa	Known RBP	12.07	□□□□□ -0.48
SPOP-216	ENST00000509869	MYH16	Q9H6N6	1097 aa		12.07	□□□□□ -0.48
SPOP-216	ENST00000509869	ADCY9	O60503	1353 aa		12.06	□□□□□ -0.48
SPOP-216	ENST00000509869	KLRG2	A4D1S0	409 aa	Predicted RBP	12.06	□□□□□ -0.48
SPOP-216	ENST00000509869	CCER2	I3L3R5	266 aa		12.06	□□□□□ -0.48
SPOP-216	ENST00000509869	DDX58	O95786	925 aa	Known RBP	12.06	□□□□□ -0.48
SPOP-216	ENST00000509869	HCLS1	P14317	486 aa	Predicted RBP	12.06	□□□□□ -0.48
SPOP-216	ENST00000509869	RTL5	Q5HYW3	569 aa	Predicted RBP	12.06	□□□□□ -0.48
SPOP-216	ENST00000509869	C3orf67	Q6ZVT6	689 aa		12.06	□□□□□ -0.48
SPOP-216	ENST00000509869	SYNE4	Q8N205	404 aa		12.06	□□□□□ -0.48
SPOP-216	ENST00000509869	NLRP3	Q96P20	1036 aa		12.06	□□□□□ -0.48
SPOP-216	ENST00000509869	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.06	□□□□□ -0.48
SPOP-216	ENST00000509869	GTF3C3	Q9Y5Q9	886 aa		12.06	□□□□□ -0.48
SPOP-216	ENST00000509869	SLX4	Q8IY92	1834 aa		12.06	□□□□□ -0.48
SPOP-216	ENST00000509869	CACNA1S	Q13698	1873 aa		12.06	□□□□□ -0.48
SPOP-216	ENST00000509869	NFKBIE	O00221	500 aa		12.05	□□□□□ -0.48
SPOP-216	ENST00000509869	SLC4A2	P04920	1241 aa		12.05	□□□□□ -0.48
SPOP-216	ENST00000509869	LMNB1	P20700	586 aa		12.05	□□□□□ -0.48
SPOP-216	ENST00000509869	ALDH1B1	P30837	517 aa		12.05	□□□□□ -0.48
SPOP-216	ENST00000509869	SOGA3	Q5TF21	947 aa		12.05	□□□□□ -0.48
SPOP-216	ENST00000509869	OLFM4	Q6UX06	510 aa		12.05	□□□□□ -0.48
SPOP-216	ENST00000509869	MYD88	Q99836	296 aa		12.05	□□□□□ -0.48
SPOP-216	ENST00000509869	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.05	□□□□□ -0.48
SPOP-216	ENST00000509869	SH3TC1	Q8TE82	1336 aa		12.05	□□□□□ -0.48
SPOP-216	ENST00000509869	CRY2	Q49AN0	593 aa		12.04	□□□□□ -0.48
SPOP-216	ENST00000509869	CCDC93	Q567U6	631 aa		12.04	□□□□□ -0.48
SPOP-216	ENST00000509869	FAM89A	Q96GI7	184 aa		12.04	□□□□□ -0.48
SPOP-216	ENST00000509869	RBM17	Q96I25	401 aa	Known RBP	12.04	□□□□□ -0.48
SPOP-216	ENST00000509869	ISCA1	Q9BUE6	129 aa		12.04	□□□□□ -0.48
SPOP-216	ENST00000509869	TAOK3	Q9H2K8	898 aa		12.04	□□□□□ -0.48
SPOP-216	ENST00000509869	MAP3K2	Q9Y2U5	619 aa		12.04	□□□□□ -0.48
SPOP-216	ENST00000509869	ANKRD36C	Q5JPF3	1778 aa		12.04	□□□□□ -0.48
SPOP-216	ENST00000509869	PRELP	P51888	382 aa		12.03	□□□□□ -0.48
SPOP-216	ENST00000509869	SLC10A5	Q5PT55	438 aa		12.03	□□□□□ -0.48
SPOP-216	ENST00000509869	G2E3	Q7L622	706 aa		12.03	□□□□□ -0.48
SPOP-216	ENST00000509869	RNF123	Q5XPI4	1314 aa		12.03	□□□□□ -0.48
SPOP-216	ENST00000509869	RIC1	Q4ADV7	1423 aa		12.03	□□□□□ -0.48
SPOP-216	ENST00000509869	PI4KAP2	A4QPH2	592 aa		12.02	□□□□□ -0.49
SPOP-216	ENST00000509869	PPEF1	O14829	653 aa	Predicted RBP	12.02	□□□□□ -0.49
SPOP-216	ENST00000509869	VAMP4	O75379	141 aa		12.02	□□□□□ -0.49
SPOP-216	ENST00000509869	HOXA10	P31260	410 aa	Predicted RBP	12.02	□□□□□ -0.49
SPOP-216	ENST00000509869	MIER1	Q8N108	512 aa		12.02	□□□□□ -0.49
SPOP-216	ENST00000509869	PI4KAP1	Q8N8J0	262 aa		12.02	□□□□□ -0.49
SPOP-216	ENST00000509869	C7orf43	Q8WVR3	580 aa		12.02	□□□□□ -0.49
SPOP-216	ENST00000509869	JARID2	Q92833	1246 aa	Predicted RBP	12.02	□□□□□ -0.49
SPOP-216	ENST00000509869	METTL22	Q9BUU2	404 aa	Predicted RBP	12.02	□□□□□ -0.49
SPOP-216	ENST00000509869	ARFGEF2	Q9Y6D5	1785 aa		12.02	□□□□□ -0.49
SPOP-216	ENST00000509869	IRS4	O14654	1257 aa	Predicted RBP	12.01	□□□□□ -0.49
SPOP-216	ENST00000509869	FLII	Q13045	1269 aa		12.01	□□□□□ -0.49
SPOP-216	ENST00000509869	FKBP5	Q13451	457 aa	Predicted RBP	12.01	□□□□□ -0.49
SPOP-216	ENST00000509869	KSR2	Q6VAB6	950 aa		12.01	□□□□□ -0.49
SPOP-216	ENST00000509869	DDX46	Q7L014	1031 aa	Known RBP	12.01	□□□□□ -0.49
SPOP-216	ENST00000509869	RTKN2	Q8IZC4	609 aa		12.01	□□□□□ -0.49
SPOP-216	ENST00000509869	CRAMP1	Q96RY5	1269 aa		12.01	□□□□□ -0.49
SPOP-216	ENST00000509869	TMX4	Q9H1E5	349 aa	Predicted RBP	12.01	□□□□□ -0.49
SPOP-216	ENST00000509869	NMRK2	Q9NPI5	230 aa		12.01	□□□□□ -0.49
SPOP-216	ENST00000509869	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.01	□□□□□ -0.49
SPOP-216	ENST00000509869	CWC25	Q9NXE8	425 aa	Predicted RBP	12.01	□□□□□ -0.49
SPOP-216	ENST00000509869	SBF1	O95248	1867 aa		12.01	□□□□□ -0.49
SPOP-216	ENST00000509869	C1QTNF8	P60827	252 aa		12	□□□□□ -0.49
SPOP-216	ENST00000509869	FKBP4	Q02790	459 aa	Known RBP eCLIP	12	□□□□□ -0.49
SPOP-216	ENST00000509869	NEXN	Q0ZGT2	675 aa		12	□□□□□ -0.49
SPOP-216	ENST00000509869	TRIM28	Q13263	835 aa	Known RBP	12	□□□□□ -0.49
SPOP-216	ENST00000509869	SLC51A	Q86UW1	340 aa		12	□□□□□ -0.49
SPOP-216	ENST00000509869	CCDC191	Q8NCU4	936 aa		12	□□□□□ -0.49
SPOP-216	ENST00000509869	ABCC4	O15439	1325 aa		12	□□□□□ -0.49
SPOP-216	ENST00000509869	KDM2B	Q8NHM5	1336 aa		12	□□□□□ -0.49
SPOP-216	ENST00000509869	ZNF521	Q96K83	1311 aa		12	□□□□□ -0.49
SPOP-216	ENST00000509869	LTBP3	Q9NS15	1303 aa		12	□□□□□ -0.49
SPOP-216	ENST00000509869		E9PSI1	815 aa		11.99	□□□□□ -0.49
SPOP-216	ENST00000509869	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.99	□□□□□ -0.49
SPOP-216	ENST00000509869	FER1L6	Q2WGJ9	1857 aa		11.99	□□□□□ -0.49
SPOP-216	ENST00000509869	CCDC88A	Q3V6T2	1871 aa		11.99	□□□□□ -0.49
SPOP-216	ENST00000509869	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.98	□□□□□ -0.49
SPOP-216	ENST00000509869	IGKV5-2	P06315	115 aa		11.98	□□□□□ -0.49
SPOP-216	ENST00000509869	CWF19L2	Q2TBE0	894 aa	Known RBP	11.98	□□□□□ -0.49
SPOP-216	ENST00000509869	CC2D2B	Q6DHV5	1058 aa		11.98	□□□□□ -0.49
SPOP-216	ENST00000509869	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.98	□□□□□ -0.49
SPOP-216	ENST00000509869	CDCA7L	Q96GN5	454 aa		11.98	□□□□□ -0.49
SPOP-216	ENST00000509869	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.98	□□□□□ -0.49
SPOP-216	ENST00000509869	RRAGC	Q9HB90	399 aa		11.98	□□□□□ -0.49
SPOP-216	ENST00000509869	GLTPD2	A6NH11	291 aa		11.97	□□□□□ -0.49
SPOP-216	ENST00000509869	KIF3C	O14782	793 aa		11.97	□□□□□ -0.49
SPOP-216	ENST00000509869	BBOX1	O75936	387 aa		11.97	□□□□□ -0.49
SPOP-216	ENST00000509869	PCCA	P05165	728 aa	Predicted RBP	11.97	□□□□□ -0.49
SPOP-216	ENST00000509869	HSP90B1	P14625	803 aa	Known RBP	11.97	□□□□□ -0.49
SPOP-216	ENST00000509869	IARS	P41252	1262 aa	Known RBP	11.97	□□□□□ -0.49
SPOP-216	ENST00000509869	GRAP	Q13588	217 aa		11.97	□□□□□ -0.49
SPOP-216	ENST00000509869	DPY19L2	Q6NUT2	758 aa		11.97	□□□□□ -0.49
SPOP-216	ENST00000509869	GRAPL	Q8TC17	118 aa	Predicted RBP	11.97	□□□□□ -0.49
SPOP-216	ENST00000509869	DNAAF4	Q8WXU2	420 aa		11.97	□□□□□ -0.49
SPOP-216	ENST00000509869	YTHDC1	Q96MU7	727 aa	Known RBP	11.97	□□□□□ -0.49
SPOP-216	ENST00000509869	ATP6V0A2	Q9Y487	856 aa		11.97	□□□□□ -0.49
SPOP-216	ENST00000509869	NEURL1B	A8MQ27	555 aa		11.96	□□□□□ -0.49

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