RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 NSFL1CQ9UNZ2 370 aaKnown RBP12.54□□□□□ -0.4
TRAPPC11-206ENST00000509857 KCNH4Q9UQ05 1017 aa12.54□□□□□ -0.4
TRAPPC11-206ENST00000509857 OPLAHO14841 1288 aa12.53□□□□□ -0.4
TRAPPC11-206ENST00000509857 GRNP28799 593 aaKnown RBP12.53□□□□□ -0.4
TRAPPC11-206ENST00000509857 MAP2K3P46734 347 aa12.53□□□□□ -0.4
TRAPPC11-206ENST00000509857 IGF1RP08069 1367 aa12.53□□□□□ -0.4
TRAPPC11-206ENST00000509857 EPB42P16452 691 aa12.52□□□□□ -0.41
TRAPPC11-206ENST00000509857 MTMR3Q13615 1198 aa12.52□□□□□ -0.41
TRAPPC11-206ENST00000509857 C11orf16Q9NQ32 467 aa12.52□□□□□ -0.41
TRAPPC11-206ENST00000509857 ZBTB39O15060 712 aa12.51□□□□□ -0.41
TRAPPC11-206ENST00000509857 ICMTO60725 284 aa12.51□□□□□ -0.41
TRAPPC11-206ENST00000509857 ADAMTS2O95450 1211 aa12.51□□□□□ -0.41
TRAPPC11-206ENST00000509857 ABL1P00519 1130 aa12.51□□□□□ -0.41
TRAPPC11-206ENST00000509857 BMP4P12644 408 aa12.51□□□□□ -0.41
TRAPPC11-206ENST00000509857 FKBP4Q02790 459 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRAPPC11-206ENST00000509857 ZNF211Q13398 564 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC11-206ENST00000509857 MPSTP25325 297 aa12.49□□□□□ -0.41
TRAPPC11-206ENST00000509857 ZAP70P43403 619 aa12.49□□□□□ -0.41
TRAPPC11-206ENST00000509857 GRIN2CQ14957 1233 aa12.49□□□□□ -0.41
TRAPPC11-206ENST00000509857 HOMEZQ8IX15 550 aa12.49□□□□□ -0.41
TRAPPC11-206ENST00000509857 AVENQ9NQS1 362 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC11-206ENST00000509857 PATL2C9JE40 543 aaKnown RBP12.48□□□□□ -0.41
TRAPPC11-206ENST00000509857 FAM13AO94988 1023 aa12.48□□□□□ -0.41
TRAPPC11-206ENST00000509857 SPEM2Q0P670 501 aa12.48□□□□□ -0.41
TRAPPC11-206ENST00000509857 FAM13BQ9NYF5 915 aa12.48□□□□□ -0.41
TRAPPC11-206ENST00000509857 RTCBQ9Y3I0 505 aaKnown RBP12.48□□□□□ -0.41
TRAPPC11-206ENST00000509857 ARAFP10398 606 aa12.47□□□□□ -0.41
TRAPPC11-206ENST00000509857 EIF1AXP47813 144 aaKnown RBP12.47□□□□□ -0.41
TRAPPC11-206ENST00000509857 NOM1Q5C9Z4 860 aaKnown RBP12.47□□□□□ -0.41
TRAPPC11-206ENST00000509857 ZNF468Q5VIY5 522 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC11-206ENST00000509857 SLC30A3Q99726 388 aa12.47□□□□□ -0.41
TRAPPC11-206ENST00000509857 ANO2Q9NQ90 1003 aa12.47□□□□□ -0.41
TRAPPC11-206ENST00000509857 H3BRB1 525 aa12.46□□□□□ -0.41
TRAPPC11-206ENST00000509857 LORP23490 312 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC11-206ENST00000509857 ECM1Q16610 540 aa12.46□□□□□ -0.41
TRAPPC11-206ENST00000509857 ALKBH2Q6NS38 261 aa12.46□□□□□ -0.41
TRAPPC11-206ENST00000509857 TUT1Q9H6E5 874 aaKnown RBP12.46□□□□□ -0.41
TRAPPC11-206ENST00000509857 EFCC1Q9HA90 598 aa12.46□□□□□ -0.41
TRAPPC11-206ENST00000509857 EGFRP00533 1210 aa12.45□□□□□ -0.42
TRAPPC11-206ENST00000509857 RGL4Q8IZJ4 473 aa12.45□□□□□ -0.42
TRAPPC11-206ENST00000509857 KCTD17Q8N5Z5 321 aa12.45□□□□□ -0.42
TRAPPC11-206ENST00000509857 ACDQ96AP0 544 aa12.45□□□□□ -0.42
TRAPPC11-206ENST00000509857 PIK3R5Q8WYR1 880 aa12.44□□□□□ -0.42
TRAPPC11-206ENST00000509857 OXCT2Q9BYC2 517 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC11-206ENST00000509857 GSX2Q9BZM3 304 aa12.44□□□□□ -0.42
TRAPPC11-206ENST00000509857 KCNMB2Q9Y691 235 aa12.44□□□□□ -0.42
TRAPPC11-206ENST00000509857 IVNS1ABPQ9Y6Y0 642 aa12.44□□□□□ -0.42
TRAPPC11-206ENST00000509857 SOWAHDA6NJG2 315 aa12.43□□□□□ -0.42
TRAPPC11-206ENST00000509857 CCINQ13939 588 aa12.43□□□□□ -0.42
TRAPPC11-206ENST00000509857 ATCAYQ86WG3 371 aa12.43□□□□□ -0.42
TRAPPC11-206ENST00000509857 GLYCTKQ8IVS8 523 aa12.43□□□□□ -0.42
TRAPPC11-206ENST00000509857 LRRC4BQ9NT99 713 aa12.43□□□□□ -0.42
TRAPPC11-206ENST00000509857 KLF15Q9UIH9 416 aa12.43□□□□□ -0.42
TRAPPC11-206ENST00000509857 GDF2Q9UK05 429 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC11-206ENST00000509857 PRR12Q9ULL5 1215 aa12.43□□□□□ -0.42
TRAPPC11-206ENST00000509857 USP20Q9Y2K6 914 aa12.43□□□□□ -0.42
TRAPPC11-206ENST00000509857 INSM1Q01101 510 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC11-206ENST00000509857 SLCO4C1Q6ZQN7 724 aa12.42□□□□□ -0.42
TRAPPC11-206ENST00000509857 GOLGA6L1Q8N7Z2 621 aa12.42□□□□□ -0.42
TRAPPC11-206ENST00000509857 SIN3BO75182 1162 aa12.41□□□□□ -0.42
TRAPPC11-206ENST00000509857 ADH6P28332 368 aa12.41□□□□□ -0.42
TRAPPC11-206ENST00000509857 ARHGAP4P98171 946 aa12.41□□□□□ -0.42
TRAPPC11-206ENST00000509857 NEUROD1Q13562 356 aa12.41□□□□□ -0.42
TRAPPC11-206ENST00000509857 GPR152Q8TDT2 470 aa12.41□□□□□ -0.42
TRAPPC11-206ENST00000509857 FZD6O60353 706 aa12.4□□□□□ -0.42
TRAPPC11-206ENST00000509857 XYLBO75191 536 aa12.4□□□□□ -0.42
TRAPPC11-206ENST00000509857 MZF1P28698 734 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC11-206ENST00000509857 TRIP4Q15650 581 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC11-206ENST00000509857 ZNF385CQ66K41 422 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC11-206ENST00000509857 CMTR1Q8N1G2 835 aaKnown RBP12.4□□□□□ -0.42
TRAPPC11-206ENST00000509857 LYPD4Q6UWN0 246 aa12.39□□□□□ -0.43
TRAPPC11-206ENST00000509857 SYT9Q86SS6 491 aa12.39□□□□□ -0.43
TRAPPC11-206ENST00000509857 WHAMMQ8TF30 809 aa12.39□□□□□ -0.43
TRAPPC11-206ENST00000509857 MDFIQ99750 246 aa12.39□□□□□ -0.43
TRAPPC11-206ENST00000509857 GGA1Q9UJY5 639 aa12.39□□□□□ -0.43
TRAPPC11-206ENST00000509857 PDGFAP04085 211 aa12.38□□□□□ -0.43
TRAPPC11-206ENST00000509857 CELA2BP08218 269 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC11-206ENST00000509857 PCBP4P57723 403 aaKnown RBP12.38□□□□□ -0.43
TRAPPC11-206ENST00000509857 ZSCAN1Q8NBB4 408 aa12.38□□□□□ -0.43
TRAPPC11-206ENST00000509857 EDEM1Q92611 657 aa12.38□□□□□ -0.43
TRAPPC11-206ENST00000509857 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC11-206ENST00000509857 OIP5O43482 229 aa12.37□□□□□ -0.43
TRAPPC11-206ENST00000509857 MAP3K6O95382 1288 aa12.37□□□□□ -0.43
TRAPPC11-206ENST00000509857 RPLP1P05386 114 aaKnown RBP12.37□□□□□ -0.43
TRAPPC11-206ENST00000509857 BCRP11274 1271 aa12.37□□□□□ -0.43
TRAPPC11-206ENST00000509857 RAB44Q7Z6P3 723 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC11-206ENST00000509857 FCHSD1Q86WN1 690 aa12.37□□□□□ -0.43
TRAPPC11-206ENST00000509857 AEBP1Q8IUX7 1158 aa12.37□□□□□ -0.43
TRAPPC11-206ENST00000509857 BHMTQ93088 406 aa12.37□□□□□ -0.43
TRAPPC11-206ENST00000509857 NUDT16Q96DE0 195 aaKnown RBP12.37□□□□□ -0.43
TRAPPC11-206ENST00000509857 NEURL1BA8MQ27 555 aa12.36□□□□□ -0.43
TRAPPC11-206ENST00000509857 DNM1Q05193 864 aaKnown RBP12.36□□□□□ -0.43
TRAPPC11-206ENST00000509857 TNFRSF25Q93038 417 aa12.36□□□□□ -0.43
TRAPPC11-206ENST00000509857 FNDC3AQ9Y2H6 1198 aaKnown RBP12.36□□□□□ -0.43
TRAPPC11-206ENST00000509857 ADARB2-AS1A8MUL3 147 aa12.35□□□□□ -0.43
TRAPPC11-206ENST00000509857 UBAP1LF5GYI3 381 aa12.35□□□□□ -0.43
TRAPPC11-206ENST00000509857 EPXP11678 715 aa12.35□□□□□ -0.43
TRAPPC11-206ENST00000509857 NFKB1P19838 968 aa12.35□□□□□ -0.43
TRAPPC11-206ENST00000509857 C1orf229Q6ZS94 237 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC11-206ENST00000509857 PNMA5Q96PV4 448 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms