RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 NPR1P16066 1061 aa6.75□□□□□ -1.33
HTT-206ENST00000509618 LMOD1P29536 600 aaPredicted RBP6.75□□□□□ -1.33
HTT-206ENST00000509618 GMPSP49915 693 aaPredicted RBP6.75□□□□□ -1.33
HTT-206ENST00000509618 HUNKP57058 714 aa6.75□□□□□ -1.33
HTT-206ENST00000509618 C1orf141Q5JVX7 400 aa6.75□□□□□ -1.33
HTT-206ENST00000509618 SOGA3Q5TF21 947 aa6.75□□□□□ -1.33
HTT-206ENST00000509618 SULT6B1Q6IMI4 303 aa6.75□□□□□ -1.33
HTT-206ENST00000509618 USP50Q70EL3 339 aaPredicted RBP6.75□□□□□ -1.33
HTT-206ENST00000509618 HHIPL1Q96JK4 782 aa6.75□□□□□ -1.33
HTT-206ENST00000509618 R3HDMLQ9H3Y0 253 aa6.75□□□□□ -1.33
HTT-206ENST00000509618 COLQQ9Y215 455 aaPredicted RBP6.75□□□□□ -1.33
HTT-206ENST00000509618 ASTN2O75129 1339 aaPredicted RBP6.75□□□□□ -1.33
HTT-206ENST00000509618 NPC1L1Q9UHC9 1359 aa6.74□□□□□ -1.33
HTT-206ENST00000509618 TCERG1O14776 1098 aaKnown RBP6.74□□□□□ -1.33
HTT-206ENST00000509618 ST5P78524 1137 aa6.74□□□□□ -1.33
HTT-206ENST00000509618 NOGQ13253 232 aa6.74□□□□□ -1.33
HTT-206ENST00000509618 AOC3Q16853 763 aa6.74□□□□□ -1.33
HTT-206ENST00000509618 AMOTQ4VCS5 1084 aa6.74□□□□□ -1.33
HTT-206ENST00000509618 USP48Q86UV5 1035 aa6.74□□□□□ -1.33
HTT-206ENST00000509618 NBPF15Q8N660 670 aa6.74□□□□□ -1.33
HTT-206ENST00000509618 CSRNP1Q96S65 589 aa6.74□□□□□ -1.33
HTT-206ENST00000509618 SETDB2Q96T68 719 aa6.74□□□□□ -1.33
HTT-206ENST00000509618 BRCA2P51587 3418 aa6.74□□□□□ -1.33
HTT-206ENST00000509618 HEG1Q9ULI3 1381 aa6.73□□□□□ -1.33
HTT-206ENST00000509618 TBC1D8O95759 1140 aa6.73□□□□□ -1.33
HTT-206ENST00000509618 EIF6P56537 245 aaKnown RBP6.73□□□□□ -1.33
HTT-206ENST00000509618 CAP1Q01518 475 aa6.73□□□□□ -1.33
HTT-206ENST00000509618 CXCL9Q07325 125 aa6.73□□□□□ -1.33
HTT-206ENST00000509618 NBPF5PQ86XG9 351 aaPredicted RBP6.73□□□□□ -1.33
HTT-206ENST00000509618 NUTM1Q86Y26 1132 aa6.73□□□□□ -1.33
HTT-206ENST00000509618 LARGE2Q8N3Y3 721 aa6.73□□□□□ -1.33
HTT-206ENST00000509618 ZNF296Q8WUU4 475 aaPredicted RBP6.73□□□□□ -1.33
HTT-206ENST00000509618 PSMD1Q99460 953 aa6.73□□□□□ -1.33
HTT-206ENST00000509618 ADARB2Q9NS39 739 aaKnown RBP6.73□□□□□ -1.33
HTT-206ENST00000509618 SAGE1Q9NXZ1 904 aa6.73□□□□□ -1.33
HTT-206ENST00000509618 PGAP2Q9UHJ9 254 aa6.73□□□□□ -1.33
HTT-206ENST00000509618 COL6A3P12111 3177 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 COL4A1P02462 1669 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 YDJCA8MPS7 323 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 NPHP1O15259 732 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 RAD17O75943 681 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 SLC10A3P09131 477 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 IL13P35225 146 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 HLFQ16534 295 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 MTHFSDQ2M296 383 aaKnown RBP6.72□□□□□ -1.33
HTT-206ENST00000509618 CRY2Q49AN0 593 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 AKAP4Q5JQC9 854 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 RGMBQ6NW40 437 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 MOB2Q70IA6 237 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 DZIP3Q86Y13 1208 aaKnown RBP6.72□□□□□ -1.33
HTT-206ENST00000509618 RASAL3Q86YV0 1011 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 RTKN2Q8IZC4 609 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 JDP2Q8WYK2 163 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 PDZRN3Q9UPQ7 1066 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 DUOX1Q9NRD9 1551 aa6.72□□□□□ -1.33
HTT-206ENST00000509618 RIC1Q4ADV7 1423 aa6.71□□□□□ -1.34
HTT-206ENST00000509618 A0A087WZG4 1122 aa6.71□□□□□ -1.34
HTT-206ENST00000509618 NBPF26B4DH59 902 aa6.71□□□□□ -1.34
HTT-206ENST00000509618 HMOX1P09601 288 aa6.71□□□□□ -1.34
HTT-206ENST00000509618 IL6STP40189 918 aaPredicted RBP6.71□□□□□ -1.34
HTT-206ENST00000509618 CDCA8Q53HL2 280 aa6.71□□□□□ -1.34
HTT-206ENST00000509618 NBPF10Q6P3W6 841 aaKnown RBP6.71□□□□□ -1.34
HTT-206ENST00000509618 SAMD7Q7Z3H4 446 aa6.71□□□□□ -1.34
HTT-206ENST00000509618 VSIG10Q8N0Z9 540 aa6.71□□□□□ -1.34
HTT-206ENST00000509618 GCC1Q96CN9 775 aa6.71□□□□□ -1.34
HTT-206ENST00000509618 GBA2Q9HCG7 927 aaPredicted RBP6.71□□□□□ -1.34
HTT-206ENST00000509618 SCAF8Q9UPN6 1271 aaKnown RBP6.71□□□□□ -1.34
HTT-206ENST00000509618 ZBTB12Q9Y330 459 aaPredicted RBP6.71□□□□□ -1.34
HTT-206ENST00000509618 USP16Q9Y5T5 823 aa6.71□□□□□ -1.34
HTT-206ENST00000509618 PAPPA2Q9BXP8 1791 aa6.71□□□□□ -1.34
HTT-206ENST00000509618 KIAA0100Q14667 2235 aaKnown RBP6.7□□□□□ -1.34
HTT-206ENST00000509618 SIPA1L3O60292 1781 aaPredicted RBP6.7□□□□□ -1.34
HTT-206ENST00000509618 PPIP5K2O43314 1243 aa6.7□□□□□ -1.34
HTT-206ENST00000509618 EN2P19622 333 aaPredicted RBP6.7□□□□□ -1.34
HTT-206ENST00000509618 ZNF157P51786 506 aaPredicted RBP6.7□□□□□ -1.34
HTT-206ENST00000509618 NIM1KQ8IY84 436 aa6.7□□□□□ -1.34
HTT-206ENST00000509618 POLR3GLQ9BT43 218 aa6.7□□□□□ -1.34
HTT-206ENST00000509618 NIP7Q9Y221 180 aaKnown RBP eCLIP6.7□□□□□ -1.34
HTT-206ENST00000509618 UBN2Q6ZU65 1347 aa6.7□□□□□ -1.34
HTT-206ENST00000509618 CENPFP49454 3210 aa6.7□□□□□ -1.34
HTT-206ENST00000509618 STARD3NLO95772 234 aa6.69□□□□□ -1.34
HTT-206ENST00000509618 EIF4G2P78344 907 aaKnown RBP eCLIP6.69□□□□□ -1.34
HTT-206ENST00000509618 TBC1D10BQ4KMP7 808 aaPredicted RBP6.69□□□□□ -1.34
HTT-206ENST00000509618 MICALL2Q8IY33 904 aa6.69□□□□□ -1.34
HTT-206ENST00000509618 IL17REQ8NFR9 667 aa6.69□□□□□ -1.34
HTT-206ENST00000509618 OTUD5Q96G74 571 aa6.69□□□□□ -1.34
HTT-206ENST00000509618 KCNQ5Q9NR82 932 aa6.69□□□□□ -1.34
HTT-206ENST00000509618 PPEF1O14829 653 aaPredicted RBP6.68□□□□□ -1.34
HTT-206ENST00000509618 MKRN3Q13064 507 aaKnown RBP6.68□□□□□ -1.34
HTT-206ENST00000509618 ZNF790Q6PG37 636 aa6.68□□□□□ -1.34
HTT-206ENST00000509618 CDC37L1Q7L3B6 337 aa6.68□□□□□ -1.34
HTT-206ENST00000509618 KRT26Q7Z3Y9 468 aa6.68□□□□□ -1.34
HTT-206ENST00000509618 SLC17A8Q8NDX2 589 aa6.68□□□□□ -1.34
HTT-206ENST00000509618 RTL9Q8NET4 1388 aa6.68□□□□□ -1.34
HTT-206ENST00000509618 LAMA3Q16787 3333 aa6.68□□□□□ -1.34
HTT-206ENST00000509618 H0YGN5 161 aa6.67□□□□□ -1.34
HTT-206ENST00000509618 GPR25O00155 361 aa6.67□□□□□ -1.34
HTT-206ENST00000509618 SOX1O00570 391 aaPredicted RBP6.67□□□□□ -1.34
HTT-206ENST00000509618 HSPA5P11021 654 aaKnown RBP6.67□□□□□ -1.34
HTT-206ENST00000509618 FBXO46Q6PJ61 603 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms