RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 GPC6Q9Y625 555 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-206ENST00000509429 PARP3Q9Y6F1 533 aa7.97□□□□□ -1.13
NIPBL-206ENST00000509429 USP3Q9Y6I4 520 aa7.97□□□□□ -1.13
NIPBL-206ENST00000509429 DEAF1O75398 565 aaPredicted RBP7.96□□□□□ -1.14
NIPBL-206ENST00000509429 Q6ZS46 218 aa7.96□□□□□ -1.14
NIPBL-206ENST00000509429 WFDC8Q8IUA0 241 aa7.96□□□□□ -1.14
NIPBL-206ENST00000509429 BRD7Q9NPI1 651 aa7.96□□□□□ -1.14
NIPBL-206ENST00000509429 A6NJY4 79 aa7.95□□□□□ -1.14
NIPBL-206ENST00000509429 SIRT1Q96EB6 747 aa7.95□□□□□ -1.14
NIPBL-206ENST00000509429 SLC4A9Q96Q91 983 aa7.95□□□□□ -1.14
NIPBL-206ENST00000509429 DNAJB12Q9NXW2 375 aaKnown RBP7.95□□□□□ -1.14
NIPBL-206ENST00000509429 KCNH4Q9UQ05 1017 aa7.95□□□□□ -1.14
NIPBL-206ENST00000509429 DHX15O43143 795 aaKnown RBP7.94□□□□□ -1.14
NIPBL-206ENST00000509429 GRIK5Q16478 980 aa7.94□□□□□ -1.14
NIPBL-206ENST00000509429 SERTAD1Q9UHV2 236 aa7.94□□□□□ -1.14
NIPBL-206ENST00000509429 DOLKQ9UPQ8 538 aa7.94□□□□□ -1.14
NIPBL-206ENST00000509429 EML1O00423 815 aa7.93□□□□□ -1.14
NIPBL-206ENST00000509429 KRTAP19-4Q3LI73 84 aa7.93□□□□□ -1.14
NIPBL-206ENST00000509429 TSGA10IPQ3SY00 556 aa7.93□□□□□ -1.14
NIPBL-206ENST00000509429 SH3D19Q5HYK7 790 aa7.93□□□□□ -1.14
NIPBL-206ENST00000509429 C7orf43Q8WVR3 580 aa7.93□□□□□ -1.14
NIPBL-206ENST00000509429 DBNDD2Q9BQY9 259 aa7.93□□□□□ -1.14
NIPBL-206ENST00000509429 PRKCSHP14314 528 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-206ENST00000509429 RNF43Q68DV7 783 aa7.92□□□□□ -1.14
NIPBL-206ENST00000509429 LILRA6Q6PI73 481 aa7.92□□□□□ -1.14
NIPBL-206ENST00000509429 CEP63Q96MT8 703 aa7.92□□□□□ -1.14
NIPBL-206ENST00000509429 GLB1P16278 677 aa7.91□□□□□ -1.14
NIPBL-206ENST00000509429 EFCC1Q9HA90 598 aa7.91□□□□□ -1.14
NIPBL-206ENST00000509429 RTN4Q9NQC3 1192 aaKnown RBP7.91□□□□□ -1.14
NIPBL-206ENST00000509429 ANGEL1Q9UNK9 670 aaKnown RBP7.91□□□□□ -1.14
NIPBL-206ENST00000509429 B8ZZF3 427 aa7.9□□□□□ -1.14
NIPBL-206ENST00000509429 GJD4Q96KN9 370 aaPredicted RBP7.9□□□□□ -1.14
NIPBL-206ENST00000509429 BRPF1P55201 1214 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-206ENST00000509429 L3MBTL2Q969R5 705 aa7.89□□□□□ -1.15
NIPBL-206ENST00000509429 UBL7Q96S82 380 aaPredicted RBP7.89□□□□□ -1.15
NIPBL-206ENST00000509429 C7orf69Q9H7B7 122 aa7.89□□□□□ -1.15
NIPBL-206ENST00000509429 FRRS1LQ9P0K9 344 aa7.89□□□□□ -1.15
NIPBL-206ENST00000509429 RFC5P40937 340 aa7.88□□□□□ -1.15
NIPBL-206ENST00000509429 PKN1Q16512 942 aa7.88□□□□□ -1.15
NIPBL-206ENST00000509429 FAM35AQ86V20 835 aa7.88□□□□□ -1.15
NIPBL-206ENST00000509429 ZDHHC1Q8WTX9 485 aa7.88□□□□□ -1.15
NIPBL-206ENST00000509429 OXLD1Q5BKU9 147 aa7.87□□□□□ -1.15
NIPBL-206ENST00000509429 TRIM42Q8IWZ5 723 aa7.87□□□□□ -1.15
NIPBL-206ENST00000509429 LPIN3Q9BQK8 851 aa7.87□□□□□ -1.15
NIPBL-206ENST00000509429 BUD31P41223 144 aaPredicted RBP7.86□□□□□ -1.15
NIPBL-206ENST00000509429 TEAD4Q15561 434 aa7.86□□□□□ -1.15
NIPBL-206ENST00000509429 ARMC10Q8N2F6 343 aa7.86□□□□□ -1.15
NIPBL-206ENST00000509429 TMEM229AB2RXF0 380 aa7.85□□□□□ -1.15
NIPBL-206ENST00000509429 NOS2P35228 1153 aa7.85□□□□□ -1.15
NIPBL-206ENST00000509429 PCSK7Q16549 785 aa7.85□□□□□ -1.15
NIPBL-206ENST00000509429 AGGF1Q8N302 714 aaeCLIP7.85□□□□□ -1.15
NIPBL-206ENST00000509429 PHTF2Q8N3S3 785 aa7.85□□□□□ -1.15
NIPBL-206ENST00000509429 TTC9Q92623 222 aa7.85□□□□□ -1.15
NIPBL-206ENST00000509429 ANKIB1Q9P2G1 1089 aa7.85□□□□□ -1.15
NIPBL-206ENST00000509429 HMX2A2RU54 273 aa7.84□□□□□ -1.15
NIPBL-206ENST00000509429 SFI1A8K8P3 1242 aa7.84□□□□□ -1.15
NIPBL-206ENST00000509429 CPB1P15086 417 aa7.84□□□□□ -1.15
NIPBL-206ENST00000509429 TYRO3Q06418 890 aa7.84□□□□□ -1.15
NIPBL-206ENST00000509429 SHKBP1Q8TBC3 707 aa7.84□□□□□ -1.15
NIPBL-206ENST00000509429 RHPN1Q8TCX5 695 aa7.84□□□□□ -1.15
NIPBL-206ENST00000509429 FBXL18Q96ME1 805 aa7.84□□□□□ -1.15
NIPBL-206ENST00000509429 FARP2O94887 1054 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-206ENST00000509429 HOXA10P31260 410 aaPredicted RBP7.83□□□□□ -1.16
NIPBL-206ENST00000509429 PLAURQ03405 335 aa7.83□□□□□ -1.16
NIPBL-206ENST00000509429 PERM1Q5SV97 790 aa7.82□□□□□ -1.16
NIPBL-206ENST00000509429 DCAF11Q8TEB1 546 aa7.82□□□□□ -1.16
NIPBL-206ENST00000509429 CCDC39Q9UFE4 941 aa7.82□□□□□ -1.16
NIPBL-206ENST00000509429 UVSSAQ2YD98 709 aa7.81□□□□□ -1.16
NIPBL-206ENST00000509429 ELMSAN1Q6PJG2 1045 aa7.81□□□□□ -1.16
NIPBL-206ENST00000509429 TP53INP2Q8IXH6 220 aa7.81□□□□□ -1.16
NIPBL-206ENST00000509429 SCHIP1Q9P0W5 487 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-206ENST00000509429 JAG2Q9Y219 1238 aa7.81□□□□□ -1.16
NIPBL-206ENST00000509429 COL19A1Q14993 1142 aa7.8□□□□□ -1.16
NIPBL-206ENST00000509429 TMEM259Q4ZIN3 620 aa7.8□□□□□ -1.16
NIPBL-206ENST00000509429 PNMA5Q96PV4 448 aa7.8□□□□□ -1.16
NIPBL-206ENST00000509429 ZNF232Q9UNY5 417 aa7.8□□□□□ -1.16
NIPBL-206ENST00000509429 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.8□□□□□ -1.16
NIPBL-206ENST00000509429 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.79□□□□□ -1.16
NIPBL-206ENST00000509429 UTP4Q969X6 686 aaKnown RBP7.79□□□□□ -1.16
NIPBL-206ENST00000509429 HSH2DQ96JZ2 352 aa7.79□□□□□ -1.16
NIPBL-206ENST00000509429 ARXQ96QS3 562 aa7.79□□□□□ -1.16
NIPBL-206ENST00000509429 CEP41Q9BYV8 373 aa7.79□□□□□ -1.16
NIPBL-206ENST00000509429 SRA1Q9HD15 236 aaKnown RBP7.79□□□□□ -1.16
NIPBL-206ENST00000509429 CHIC2Q9UKJ5 165 aa7.79□□□□□ -1.16
NIPBL-206ENST00000509429 PRNPP04156 253 aa7.78□□□□□ -1.16
NIPBL-206ENST00000509429 SLFNL1Q499Z3 407 aa7.78□□□□□ -1.16
NIPBL-206ENST00000509429 GSX2Q9BZM3 304 aa7.78□□□□□ -1.16
NIPBL-206ENST00000509429 PIM2Q9P1W9 311 aa7.78□□□□□ -1.16
NIPBL-206ENST00000509429 BACH1O14867 736 aa7.77□□□□□ -1.17
NIPBL-206ENST00000509429 PAPLNO95428 1278 aa7.77□□□□□ -1.17
NIPBL-206ENST00000509429 NFXL1Q6ZNB6 911 aa7.77□□□□□ -1.17
NIPBL-206ENST00000509429 CLEC10AQ8IUN9 316 aa7.77□□□□□ -1.17
NIPBL-206ENST00000509429 KSR1Q8IVT5 923 aa7.77□□□□□ -1.17
NIPBL-206ENST00000509429 NFKB1P19838 968 aa7.76□□□□□ -1.17
NIPBL-206ENST00000509429 MSMPQ1L6U9 139 aa7.76□□□□□ -1.17
NIPBL-206ENST00000509429 C1orf53Q5VUE5 145 aa7.76□□□□□ -1.17
NIPBL-206ENST00000509429 VSIG10LQ86VR7 867 aa7.76□□□□□ -1.17
NIPBL-206ENST00000509429 MAP4K3Q8IVH8 894 aa7.76□□□□□ -1.17
NIPBL-206ENST00000509429 FAM83CQ9BQN1 747 aa7.76□□□□□ -1.17
NIPBL-206ENST00000509429 WDR64B1ANS9 1081 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms