RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 RGPD5Q99666 1765 aa13.17□□□□□ -0.3
SEC31A-228ENST00000509142 RPAP1Q9BWH6 1393 aaPredicted RBP13.17□□□□□ -0.3
SEC31A-228ENST00000509142 UTYO14607 1347 aa13.17□□□□□ -0.3
SEC31A-228ENST00000509142 A0A087WZG4 1122 aa13.17□□□□□ -0.3
SEC31A-228ENST00000509142 JAKMIP1Q96N16 626 aaKnown RBP13.17□□□□□ -0.3
SEC31A-228ENST00000509142 TNS3Q68CZ2 1445 aa13.17□□□□□ -0.3
SEC31A-228ENST00000509142 LIMCH1Q9UPQ0 1083 aa13.16□□□□□ -0.3
SEC31A-228ENST00000509142 AK2P54819 239 aa13.16□□□□□ -0.3
SEC31A-228ENST00000509142 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
SEC31A-228ENST00000509142 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.16□□□□□ -0.3
SEC31A-228ENST00000509142 WDR33Q9C0J8 1336 aaKnown RBP13.16□□□□□ -0.3
SEC31A-228ENST00000509142 PTH1RQ03431 593 aa13.15□□□□□ -0.3
SEC31A-228ENST00000509142 ZCRB1Q8TBF4 217 aaKnown RBP13.15□□□□□ -0.3
SEC31A-228ENST00000509142 DDX54Q8TDD1 881 aaKnown RBP13.15□□□□□ -0.3
SEC31A-228ENST00000509142 SMC3Q9UQE7 1217 aa13.15□□□□□ -0.3
SEC31A-228ENST00000509142 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.15□□□□□ -0.3
SEC31A-228ENST00000509142 CYP46A1Q9Y6A2 500 aa13.15□□□□□ -0.3
SEC31A-228ENST00000509142 CPA1P15085 419 aa13.15□□□□□ -0.3
SEC31A-228ENST00000509142 EPHA10Q5JZY3 1008 aa13.15□□□□□ -0.3
SEC31A-228ENST00000509142 RNF214Q8ND24 703 aa13.15□□□□□ -0.3
SEC31A-228ENST00000509142 TLR7Q9NYK1 1049 aaKnown RBP13.15□□□□□ -0.3
SEC31A-228ENST00000509142 TTC14Q96N46 770 aa13.15□□□□□ -0.3
SEC31A-228ENST00000509142 PDRG1Q9NUG6 133 aa13.15□□□□□ -0.3
SEC31A-228ENST00000509142 DCCP43146 1447 aa13.14□□□□□ -0.31
SEC31A-228ENST00000509142 EVA1CP58658 441 aa13.14□□□□□ -0.31
SEC31A-228ENST00000509142 NMIQ13287 307 aaPredicted RBP13.14□□□□□ -0.31
SEC31A-228ENST00000509142 FAM227BQ96M60 508 aa13.14□□□□□ -0.31
SEC31A-228ENST00000509142 STRN4Q9NRL3 753 aa13.14□□□□□ -0.31
SEC31A-228ENST00000509142 CCDC9Q9Y3X0 531 aaKnown RBP13.14□□□□□ -0.31
SEC31A-228ENST00000509142 CRYBG1Q9Y4K1 1723 aa13.14□□□□□ -0.31
SEC31A-228ENST00000509142 MBD3O95983 291 aa13.14□□□□□ -0.31
SEC31A-228ENST00000509142 TPRNQ4KMQ1 711 aa13.14□□□□□ -0.31
SEC31A-228ENST00000509142 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
SEC31A-228ENST00000509142 ZNF330Q9Y3S2 320 aaPredicted RBP13.14□□□□□ -0.31
SEC31A-228ENST00000509142 LARGE1O95461 756 aa13.14□□□□□ -0.31
SEC31A-228ENST00000509142 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
SEC31A-228ENST00000509142 OFD1O75665 1012 aa13.13□□□□□ -0.31
SEC31A-228ENST00000509142 RNF20Q5VTR2 975 aa13.13□□□□□ -0.31
SEC31A-228ENST00000509142 PLBD2Q8NHP8 589 aa13.13□□□□□ -0.31
SEC31A-228ENST00000509142 RBM8AQ9Y5S9 174 aaKnown RBP13.13□□□□□ -0.31
SEC31A-228ENST00000509142 BRINP3Q76B58 766 aa13.13□□□□□ -0.31
SEC31A-228ENST00000509142 RUFY3Q7L099 469 aa13.13□□□□□ -0.31
SEC31A-228ENST00000509142 USP48Q86UV5 1035 aa13.13□□□□□ -0.31
SEC31A-228ENST00000509142 TFCP2Q12800 502 aa13.12□□□□□ -0.31
SEC31A-228ENST00000509142 PCDH11XQ9BZA7 1347 aa13.12□□□□□ -0.31
SEC31A-228ENST00000509142 PCDH11YQ9BZA8 1340 aa13.12□□□□□ -0.31
SEC31A-228ENST00000509142 PSMA5P28066 241 aa13.12□□□□□ -0.31
SEC31A-228ENST00000509142 LMBR1LQ6UX01 489 aa13.12□□□□□ -0.31
SEC31A-228ENST00000509142 CCDC83Q8IWF9 413 aa13.12□□□□□ -0.31
SEC31A-228ENST00000509142 DNAJC2Q99543 621 aaKnown RBP13.12□□□□□ -0.31
SEC31A-228ENST00000509142 COPRSQ9NQ92 184 aa13.12□□□□□ -0.31
SEC31A-228ENST00000509142 ALS2Q96Q42 1657 aa13.12□□□□□ -0.31
SEC31A-228ENST00000509142 SYAP1Q96A49 352 aaPredicted RBP13.12□□□□□ -0.31
SEC31A-228ENST00000509142 ADCK5Q3MIX3 580 aa13.11□□□□□ -0.31
SEC31A-228ENST00000509142 CREB3L3Q68CJ9 461 aa13.11□□□□□ -0.31
SEC31A-228ENST00000509142 ZSCAN31Q96LW9 406 aaPredicted RBP13.11□□□□□ -0.31
SEC31A-228ENST00000509142 NEUROD6Q96NK8 337 aa13.11□□□□□ -0.31
SEC31A-228ENST00000509142 WDR17Q8IZU2 1322 aa13.11□□□□□ -0.31
SEC31A-228ENST00000509142 PTPN12Q05209 780 aaKnown RBP13.11□□□□□ -0.31
SEC31A-228ENST00000509142 ST3GAL1Q11201 340 aa13.11□□□□□ -0.31
SEC31A-228ENST00000509142 TNNI3KQ59H18 835 aa13.11□□□□□ -0.31
SEC31A-228ENST00000509142 VPS53Q5VIR6 699 aa13.11□□□□□ -0.31
SEC31A-228ENST00000509142 ZBTB3Q9H5J0 574 aa13.11□□□□□ -0.31
SEC31A-228ENST00000509142 FPGT-TNNI3KV9GXZ4 949 aa13.11□□□□□ -0.31
SEC31A-228ENST00000509142 CAMTA1Q9Y6Y1 1673 aa13.1□□□□□ -0.31
SEC31A-228ENST00000509142 A1BGP04217 495 aa13.1□□□□□ -0.31
SEC31A-228ENST00000509142 HS1BP3Q53T59 392 aa13.1□□□□□ -0.31
SEC31A-228ENST00000509142 EDC3Q96F86 508 aaKnown RBP13.1□□□□□ -0.31
SEC31A-228ENST00000509142 A0A0D9SFI3 127 aa13.1□□□□□ -0.31
SEC31A-228ENST00000509142 ZNF500O60304 480 aaPredicted RBP13.1□□□□□ -0.31
SEC31A-228ENST00000509142 IL2RBP14784 551 aa13.1□□□□□ -0.31
SEC31A-228ENST00000509142 CWC25Q9NXE8 425 aaPredicted RBP13.1□□□□□ -0.31
SEC31A-228ENST00000509142 SLAIN2Q9P270 581 aa13.1□□□□□ -0.31
SEC31A-228ENST00000509142 CNPY2Q9Y2B0 182 aa13.1□□□□□ -0.31
SEC31A-228ENST00000509142 ATP6V1DQ9Y5K8 247 aa13.1□□□□□ -0.31
SEC31A-228ENST00000509142 CPDO75976 1380 aa13.1□□□□□ -0.31
SEC31A-228ENST00000509142 STX6O43752 255 aa13.1□□□□□ -0.31
SEC31A-228ENST00000509142 TM6SF1Q9BZW5 370 aa13.1□□□□□ -0.31
SEC31A-228ENST00000509142 SH2B1Q9NRF2 756 aaPredicted RBP13.1□□□□□ -0.31
SEC31A-228ENST00000509142 NECTIN1Q15223 517 aa13.09□□□□□ -0.31
SEC31A-228ENST00000509142 BLOC1S2Q6QNY1 142 aa13.09□□□□□ -0.31
SEC31A-228ENST00000509142 TTLL7Q6ZT98 887 aa13.09□□□□□ -0.31
SEC31A-228ENST00000509142 MAP4K1Q92918 833 aa13.09□□□□□ -0.31
SEC31A-228ENST00000509142 ZSWIM6Q9HCJ5 1215 aa13.09□□□□□ -0.31
SEC31A-228ENST00000509142 DBNLQ9UJU6 430 aaKnown RBP13.09□□□□□ -0.31
SEC31A-228ENST00000509142 LMTK3Q96Q04 1460 aa13.09□□□□□ -0.31
SEC31A-228ENST00000509142 ERVV-2B6SEH9 535 aa13.09□□□□□ -0.31
SEC31A-228ENST00000509142 MSNP26038 577 aaKnown RBP13.09□□□□□ -0.31
SEC31A-228ENST00000509142 LRP10Q7Z4F1 713 aa13.09□□□□□ -0.31
SEC31A-228ENST00000509142 ZSCAN22P10073 491 aaPredicted RBP13.09□□□□□ -0.31
SEC31A-228ENST00000509142 ZKSCAN5Q9Y2L8 839 aa13.09□□□□□ -0.31
SEC31A-228ENST00000509142 SLC27A2O14975 620 aa13.08□□□□□ -0.32
SEC31A-228ENST00000509142 SYT1P21579 422 aa13.08□□□□□ -0.32
SEC31A-228ENST00000509142 DBNDD2Q9BQY9 259 aa13.08□□□□□ -0.32
SEC31A-228ENST00000509142 NDUFB9Q9Y6M9 179 aa13.08□□□□□ -0.32
SEC31A-228ENST00000509142 SCN11AQ9UI33 1791 aa13.08□□□□□ -0.32
SEC31A-228ENST00000509142 SIPA1L3O60292 1781 aaPredicted RBP13.08□□□□□ -0.32
SEC31A-228ENST00000509142 NBPF26B4DH59 902 aa13.08□□□□□ -0.32
SEC31A-228ENST00000509142 ATP5JP18859 108 aa13.08□□□□□ -0.32
SEC31A-228ENST00000509142 GJB2P29033 226 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms