RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 PLBD2Q8NHP8 589 aa24.11■■□□□ 1.45
UBE3D-207ENST00000509102 ELL2O00472 640 aaPredicted RBP24.1■■□□□ 1.45
UBE3D-207ENST00000509102 CRY2Q49AN0 593 aa24.1■■□□□ 1.45
UBE3D-207ENST00000509102 WWC1Q8IX03 1113 aa24.1■■□□□ 1.45
UBE3D-207ENST00000509102 C16orf71Q8IYS4 520 aaPredicted RBP24.1■■□□□ 1.45
UBE3D-207ENST00000509102 NLRP3Q96P20 1036 aa24.1■■□□□ 1.45
UBE3D-207ENST00000509102 CACNA1SQ13698 1873 aa24.1■■□□□ 1.45
UBE3D-207ENST00000509102 SLX4Q8IY92 1834 aa24.1■■□□□ 1.45
UBE3D-207ENST00000509102 KIF3CO14782 793 aa24.08■■□□□ 1.45
UBE3D-207ENST00000509102 GOLGA2Q08379 1002 aa24.08■■□□□ 1.45
UBE3D-207ENST00000509102 RTKN2Q8IZC4 609 aa24.08■■□□□ 1.45
UBE3D-207ENST00000509102 RBM17Q96I25 401 aaKnown RBP24.08■■□□□ 1.45
UBE3D-207ENST00000509102 CCDC30Q5VVM6 783 aa24.07■■□□□ 1.44
UBE3D-207ENST00000509102 DPY19L2Q6NUT2 758 aa24.07■■□□□ 1.44
UBE3D-207ENST00000509102 NLRP10Q86W26 655 aa24.07■■□□□ 1.44
UBE3D-207ENST00000509102 TMX4Q9H1E5 349 aaPredicted RBP24.07■■□□□ 1.44
UBE3D-207ENST00000509102 NMRK2Q9NPI5 230 aa24.07■■□□□ 1.44
UBE3D-207ENST00000509102 TRMT112Q9UI30 125 aaKnown RBP24.07■■□□□ 1.44
UBE3D-207ENST00000509102 IL16Q14005 1332 aa24.07■■□□□ 1.44
UBE3D-207ENST00000509102 ANKRD36CQ5JPF3 1778 aa24.06■■□□□ 1.44
UBE3D-207ENST00000509102 TNRC6CQ9HCJ0 1690 aaKnown RBP24.06■■□□□ 1.44
UBE3D-207ENST00000509102 TOMM70O94826 608 aa24.06■■□□□ 1.44
UBE3D-207ENST00000509102 C8orf58Q8NAV2 365 aa24.06■■□□□ 1.44
UBE3D-207ENST00000509102 FER1L6Q2WGJ9 1857 aa24.06■■□□□ 1.44
UBE3D-207ENST00000509102 SH3TC1Q8TE82 1336 aa24.06■■□□□ 1.44
UBE3D-207ENST00000509102 HOXA10P31260 410 aaPredicted RBP24.05■■□□□ 1.44
UBE3D-207ENST00000509102 CC2D2BQ6DHV5 1058 aa24.05■■□□□ 1.44
UBE3D-207ENST00000509102 RIC3Q7Z5B4 369 aa24.05■■□□□ 1.44
UBE3D-207ENST00000509102 FAM9BQ8IZU0 186 aa24.05■■□□□ 1.44
UBE3D-207ENST00000509102 C7orf43Q8WVR3 580 aa24.05■■□□□ 1.44
UBE3D-207ENST00000509102 GLTPD2A6NH11 291 aa24.04■■□□□ 1.44
UBE3D-207ENST00000509102 DDX58O95786 925 aaKnown RBP24.04■■□□□ 1.44
UBE3D-207ENST00000509102 FKBP4Q02790 459 aaKnown RBP eCLIP24.04■■□□□ 1.44
UBE3D-207ENST00000509102 SLC10A5Q5PT55 438 aa24.04■■□□□ 1.44
UBE3D-207ENST00000509102 TSR2Q969E8 191 aaKnown RBP24.04■■□□□ 1.44
UBE3D-207ENST00000509102 CRAMP1Q96RY5 1269 aa24.04■■□□□ 1.44
UBE3D-207ENST00000509102 STK31Q9BXU1 1019 aa24.04■■□□□ 1.44
UBE3D-207ENST00000509102 TIAM2Q8IVF5 1701 aa24.04■■□□□ 1.44
UBE3D-207ENST00000509102 PRELPP51888 382 aa24.03■■□□□ 1.44
UBE3D-207ENST00000509102 GRIPAP1Q4V328 841 aa24.03■■□□□ 1.44
UBE3D-207ENST00000509102 CCDC88AQ3V6T2 1871 aa24.02■■□□□ 1.44
UBE3D-207ENST00000509102 WDR63Q8IWG1 891 aa24.02■■□□□ 1.44
UBE3D-207ENST00000509102 RRAGCQ9HB90 399 aa24.02■■□□□ 1.44
UBE3D-207ENST00000509102 SALL2Q9Y467 1007 aaPredicted RBP24.02■■□□□ 1.44
UBE3D-207ENST00000509102 PPEF1O14829 653 aaPredicted RBP24■■□□□ 1.43
UBE3D-207ENST00000509102 TWISTNBQ3B726 338 aaPredicted RBP24■■□□□ 1.43
UBE3D-207ENST00000509102 ATP5J2-PTCD1G3V325 749 aa23.99■■□□□ 1.43
UBE3D-207ENST00000509102 HCLS1P14317 486 aaPredicted RBP23.99■■□□□ 1.43
UBE3D-207ENST00000509102 HSP90B1P14625 803 aaKnown RBP23.99■■□□□ 1.43
UBE3D-207ENST00000509102 VEGFAP15692 232 aaPredicted RBP23.99■■□□□ 1.43
UBE3D-207ENST00000509102 ISCA1Q9BUE6 129 aa23.99■■□□□ 1.43
UBE3D-207ENST00000509102 PHAXQ9H814 394 aaKnown RBP23.99■■□□□ 1.43
UBE3D-207ENST00000509102 DICER1Q9UPY3 1922 aaKnown RBP23.98■■□□□ 1.43
UBE3D-207ENST00000509102 DDX46Q7L014 1031 aaKnown RBP23.98■■□□□ 1.43
UBE3D-207ENST00000509102 TSPYL6Q8N831 410 aa23.98■■□□□ 1.43
UBE3D-207ENST00000509102 RBM46Q8TBY0 533 aaKnown RBP23.98■■□□□ 1.43
UBE3D-207ENST00000509102 HSPA6P17066 643 aa23.97■■□□□ 1.43
UBE3D-207ENST00000509102 TRIM28Q13263 835 aaKnown RBP23.97■■□□□ 1.43
UBE3D-207ENST00000509102 OLFM4Q6UX06 510 aa23.97■■□□□ 1.43
UBE3D-207ENST00000509102 C3orf67Q6ZVT6 689 aa23.97■■□□□ 1.43
UBE3D-207ENST00000509102 PSMD1Q99460 953 aa23.97■■□□□ 1.43
UBE3D-207ENST00000509102 ZNF277Q9NRM2 450 aaPredicted RBP23.97■■□□□ 1.43
UBE3D-207ENST00000509102 SYNE4Q8N205 404 aa23.96■■□□□ 1.43
UBE3D-207ENST00000509102 FANCIQ9NVI1 1328 aa23.95■■□□□ 1.42
UBE3D-207ENST00000509102 TCERG1O14776 1098 aaKnown RBP23.95■■□□□ 1.42
UBE3D-207ENST00000509102 BBOX1O75936 387 aa23.95■■□□□ 1.42
UBE3D-207ENST00000509102 IARSP41252 1262 aaKnown RBP23.95■■□□□ 1.42
UBE3D-207ENST00000509102 JDP2Q8WYK2 163 aa23.95■■□□□ 1.42
UBE3D-207ENST00000509102 FAM89AQ96GI7 184 aa23.95■■□□□ 1.42
UBE3D-207ENST00000509102 MYD88Q99836 296 aa23.95■■□□□ 1.42
UBE3D-207ENST00000509102 ABCC4O15439 1325 aa23.94■■□□□ 1.42
UBE3D-207ENST00000509102 MYH16Q9H6N6 1097 aa23.94■■□□□ 1.42
UBE3D-207ENST00000509102 NEXNQ0ZGT2 675 aa23.93■■□□□ 1.42
UBE3D-207ENST00000509102 FSTL1Q12841 308 aa23.93■■□□□ 1.42
UBE3D-207ENST00000509102 CCDC191Q8NCU4 936 aa23.93■■□□□ 1.42
UBE3D-207ENST00000509102 ZNF428Q96B54 188 aa23.93■■□□□ 1.42
UBE3D-207ENST00000509102 ATP6V0A2Q9Y487 856 aa23.93■■□□□ 1.42
UBE3D-207ENST00000509102 TMC4Q7Z404 712 aa23.92■■□□□ 1.42
UBE3D-207ENST00000509102 ZBTB38Q8NAP3 1195 aaPredicted RBP23.92■■□□□ 1.42
UBE3D-207ENST00000509102 METTL22Q9BUU2 404 aaPredicted RBP23.92■■□□□ 1.42
UBE3D-207ENST00000509102 IRS4O14654 1257 aaPredicted RBP23.91■■□□□ 1.42
UBE3D-207ENST00000509102 SLC4A2P04920 1241 aa23.91■■□□□ 1.42
UBE3D-207ENST00000509102 GRAPQ13588 217 aa23.91■■□□□ 1.42
UBE3D-207ENST00000509102 RTL5Q5HYW3 569 aaPredicted RBP23.91■■□□□ 1.42
UBE3D-207ENST00000509102 KSR2Q6VAB6 950 aa23.91■■□□□ 1.42
UBE3D-207ENST00000509102 SMC1BQ8NDV3 1235 aa23.91■■□□□ 1.42
UBE3D-207ENST00000509102 SUPT20HQ8NEM7 779 aa23.91■■□□□ 1.42
UBE3D-207ENST00000509102 GRAPLQ8TC17 118 aaPredicted RBP23.91■■□□□ 1.42
UBE3D-207ENST00000509102 CWC25Q9NXE8 425 aaPredicted RBP23.91■■□□□ 1.42
UBE3D-207ENST00000509102 MAP3K2Q9Y2U5 619 aa23.91■■□□□ 1.42
UBE3D-207ENST00000509102 IQCA1LA6NCM1 817 aa23.9■■□□□ 1.42
UBE3D-207ENST00000509102 PI4KAP2A4QPH2 592 aa23.89■■□□□ 1.41
UBE3D-207ENST00000509102 DDNO94850 711 aaPredicted RBP23.89■■□□□ 1.41
UBE3D-207ENST00000509102 APLP1P51693 650 aa23.89■■□□□ 1.41
UBE3D-207ENST00000509102 SP8Q8IXZ3 490 aa23.89■■□□□ 1.41
UBE3D-207ENST00000509102 LARGE2Q8N3Y3 721 aa23.89■■□□□ 1.41
UBE3D-207ENST00000509102 PI4KAP1Q8N8J0 262 aa23.89■■□□□ 1.41
UBE3D-207ENST00000509102 WDR90Q96KV7 1748 aa23.89■■□□□ 1.41
UBE3D-207ENST00000509102 LAMB2P55268 1798 aa23.88■■□□□ 1.41
UBE3D-207ENST00000509102 SNED1Q8TER0 1413 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms