RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 PARP10Q53GL7 1025 aa13.66□□□□□ -0.22
POLR2J3-214ENST00000508910 USPL1Q5W0Q7 1092 aa13.66□□□□□ -0.22
POLR2J3-214ENST00000508910 SMIM5Q71RC9 77 aa13.66□□□□□ -0.22
POLR2J3-214ENST00000508910 NLRP10Q86W26 655 aa13.66□□□□□ -0.22
POLR2J3-214ENST00000508910 STK32BQ9NY57 414 aa13.66□□□□□ -0.22
POLR2J3-214ENST00000508910 SRP68Q9UHB9 627 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-214ENST00000508910 PCDHB15Q9Y5E8 787 aa13.66□□□□□ -0.22
POLR2J3-214ENST00000508910 UBN2Q6ZU65 1347 aa13.65□□□□□ -0.22
POLR2J3-214ENST00000508910 B4GALNT3Q6L9W6 998 aa13.65□□□□□ -0.22
POLR2J3-214ENST00000508910 UBE3BQ7Z3V4 1068 aa13.65□□□□□ -0.22
POLR2J3-214ENST00000508910 ANO8Q9HCE9 1232 aaPredicted RBP13.65□□□□□ -0.22
POLR2J3-214ENST00000508910 LRRFIP2Q9Y608 721 aaKnown RBP13.65□□□□□ -0.22
POLR2J3-214ENST00000508910 H7C1W4 665 aa13.64□□□□□ -0.23
POLR2J3-214ENST00000508910 PCCAP05165 728 aaPredicted RBP13.64□□□□□ -0.23
POLR2J3-214ENST00000508910 SLC15A2Q16348 729 aa13.64□□□□□ -0.23
POLR2J3-214ENST00000508910 UPF1Q92900 1129 aaKnown RBP eCLIP13.64□□□□□ -0.23
POLR2J3-214ENST00000508910 BCL2L12Q9HB09 334 aa13.64□□□□□ -0.23
POLR2J3-214ENST00000508910 NIP7Q9Y221 180 aaKnown RBP eCLIP13.64□□□□□ -0.23
POLR2J3-214ENST00000508910 LAMB2P55268 1798 aa13.63□□□□□ -0.23
POLR2J3-214ENST00000508910 CASP7P55210 303 aa13.63□□□□□ -0.23
POLR2J3-214ENST00000508910 HDAC1Q13547 482 aaPredicted RBP13.63□□□□□ -0.23
POLR2J3-214ENST00000508910 CEP85Q6P2H3 762 aa13.63□□□□□ -0.23
POLR2J3-214ENST00000508910 RPAP2Q8IXW5 612 aaPredicted RBP13.63□□□□□ -0.23
POLR2J3-214ENST00000508910 ANKRD44Q8N8A2 993 aa13.63□□□□□ -0.23
POLR2J3-214ENST00000508910 ZBTB38Q8NAP3 1195 aaPredicted RBP13.63□□□□□ -0.23
POLR2J3-214ENST00000508910 RWDD1Q9H446 243 aaPredicted RBP13.63□□□□□ -0.23
POLR2J3-214ENST00000508910 PNPLA7Q6ZV29 1317 aa13.63□□□□□ -0.23
POLR2J3-214ENST00000508910 CDHR2Q9BYE9 1310 aa13.63□□□□□ -0.23
POLR2J3-214ENST00000508910 CARMIL3Q8ND23 1372 aa13.62□□□□□ -0.23
POLR2J3-214ENST00000508910 TBC1D9BQ66K14 1250 aa13.62□□□□□ -0.23
POLR2J3-214ENST00000508910 PPP1R42Q7Z4L9 355 aa13.62□□□□□ -0.23
POLR2J3-214ENST00000508910 SUCLG2Q96I99 432 aa13.62□□□□□ -0.23
POLR2J3-214ENST00000508910 UTP14AQ9BVJ6 771 aaKnown RBP13.62□□□□□ -0.23
POLR2J3-214ENST00000508910 TRMT112Q9UI30 125 aaKnown RBP13.62□□□□□ -0.23
POLR2J3-214ENST00000508910 HMMRO75330 724 aa13.61□□□□□ -0.23
POLR2J3-214ENST00000508910 GYS1P13807 737 aa13.61□□□□□ -0.23
POLR2J3-214ENST00000508910 CENPQQ7L2Z9 268 aaPredicted RBP13.61□□□□□ -0.23
POLR2J3-214ENST00000508910 COL23A1Q86Y22 540 aaPredicted RBP13.61□□□□□ -0.23
POLR2J3-214ENST00000508910 SETDB2Q96T68 719 aa13.61□□□□□ -0.23
POLR2J3-214ENST00000508910 KDM2BQ8NHM5 1336 aa13.61□□□□□ -0.23
POLR2J3-214ENST00000508910 SH3TC1Q8TE82 1336 aa13.61□□□□□ -0.23
POLR2J3-214ENST00000508910 NTSR2O95665 410 aa13.6□□□□□ -0.23
POLR2J3-214ENST00000508910 HSP90B1P14625 803 aaKnown RBP13.6□□□□□ -0.23
POLR2J3-214ENST00000508910 MTX1Q13505 466 aa13.6□□□□□ -0.23
POLR2J3-214ENST00000508910 SUSD4Q5VX71 490 aa13.6□□□□□ -0.23
POLR2J3-214ENST00000508910 BICDL1Q6ZP65 573 aa13.6□□□□□ -0.23
POLR2J3-214ENST00000508910 SIRT2Q8IXJ6 389 aa13.6□□□□□ -0.23
POLR2J3-214ENST00000508910 FAM89AQ96GI7 184 aa13.6□□□□□ -0.23
POLR2J3-214ENST00000508910 KAZALD1Q96I82 304 aa13.6□□□□□ -0.23
POLR2J3-214ENST00000508910 NYXQ9GZU5 481 aa13.6□□□□□ -0.23
POLR2J3-214ENST00000508910 BICC1Q9H694 974 aaKnown RBP13.6□□□□□ -0.23
POLR2J3-214ENST00000508910 MYH3P11055 1940 aa13.59□□□□□ -0.23
POLR2J3-214ENST00000508910 ATP8B2P98198 1209 aa13.59□□□□□ -0.23
POLR2J3-214ENST00000508910 RABL6Q3YEC7 729 aaPredicted RBP13.59□□□□□ -0.23
POLR2J3-214ENST00000508910 RTL5Q5HYW3 569 aaPredicted RBP13.59□□□□□ -0.23
POLR2J3-214ENST00000508910 JARID2Q92833 1246 aaPredicted RBP13.59□□□□□ -0.23
POLR2J3-214ENST00000508910 PLA2G12BQ9BX93 195 aa13.59□□□□□ -0.23
POLR2J3-214ENST00000508910 DDX60Q8IY21 1712 aaKnown RBP13.59□□□□□ -0.23
POLR2J3-214ENST00000508910 FAM177BA6PVY3 158 aa13.58□□□□□ -0.24
POLR2J3-214ENST00000508910 IRS4O14654 1257 aaPredicted RBP13.58□□□□□ -0.24
POLR2J3-214ENST00000508910 IGHDP01880 384 aa13.58□□□□□ -0.24
POLR2J3-214ENST00000508910 NFIXQ14938 502 aa13.58□□□□□ -0.24
POLR2J3-214ENST00000508910 NBPF5PQ86XG9 351 aaPredicted RBP13.58□□□□□ -0.24
POLR2J3-214ENST00000508910 NLGN1Q8N2Q7 840 aa13.58□□□□□ -0.24
POLR2J3-214ENST00000508910 PNMA6EA0A0J9YXQ4 647 aa13.57□□□□□ -0.24
POLR2J3-214ENST00000508910 SRGAP3O43295 1099 aa13.57□□□□□ -0.24
POLR2J3-214ENST00000508910 FOXO4P98177 505 aa13.57□□□□□ -0.24
POLR2J3-214ENST00000508910 POLA2Q14181 598 aa13.57□□□□□ -0.24
POLR2J3-214ENST00000508910 EPHA10Q5JZY3 1008 aa13.57□□□□□ -0.24
POLR2J3-214ENST00000508910 SSH3Q8TE77 659 aa13.57□□□□□ -0.24
POLR2J3-214ENST00000508910 RIC1Q4ADV7 1423 aa13.56□□□□□ -0.24
POLR2J3-214ENST00000508910 PDE8AO60658 829 aa13.56□□□□□ -0.24
POLR2J3-214ENST00000508910 TM4SF1P30408 202 aa13.56□□□□□ -0.24
POLR2J3-214ENST00000508910 TPTE2Q6XPS3 522 aa13.56□□□□□ -0.24
POLR2J3-214ENST00000508910 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
POLR2J3-214ENST00000508910 ABCC12Q96J65 1359 aa13.56□□□□□ -0.24
POLR2J3-214ENST00000508910 GTF2E1P29083 439 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-214ENST00000508910 CTSWP56202 376 aa13.55□□□□□ -0.24
POLR2J3-214ENST00000508910 LMBR1LQ6UX01 489 aa13.55□□□□□ -0.24
POLR2J3-214ENST00000508910 ILDR2Q71H61 639 aa13.55□□□□□ -0.24
POLR2J3-214ENST00000508910 NUTM1Q86Y26 1132 aa13.55□□□□□ -0.24
POLR2J3-214ENST00000508910 SMC5Q8IY18 1101 aa13.55□□□□□ -0.24
POLR2J3-214ENST00000508910 SYNE4Q8N205 404 aa13.55□□□□□ -0.24
POLR2J3-214ENST00000508910 CNBD1Q8NA66 436 aa13.55□□□□□ -0.24
POLR2J3-214ENST00000508910 NRXN2Q9P2S2 1712 aa13.55□□□□□ -0.24
POLR2J3-214ENST00000508910 CASZ1Q86V15 1759 aa13.54□□□□□ -0.24
POLR2J3-214ENST00000508910 POLRMTO00411 1230 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-214ENST00000508910 NPHP1O15259 732 aa13.54□□□□□ -0.24
POLR2J3-214ENST00000508910 HCLS1P14317 486 aaPredicted RBP13.54□□□□□ -0.24
POLR2J3-214ENST00000508910 DDR1Q08345 913 aa13.54□□□□□ -0.24
POLR2J3-214ENST00000508910 ERFEQ4G0M1 354 aa13.54□□□□□ -0.24
POLR2J3-214ENST00000508910 DCTPP1Q9H773 170 aa13.54□□□□□ -0.24
POLR2J3-214ENST00000508910 CHMP3Q9Y3E7 222 aa13.54□□□□□ -0.24
POLR2J3-214ENST00000508910 TNRC6CQ9HCJ0 1690 aaKnown RBP13.53□□□□□ -0.24
POLR2J3-214ENST00000508910 SERPINB2P05120 415 aa13.53□□□□□ -0.24
POLR2J3-214ENST00000508910 CSF1RP07333 972 aa13.53□□□□□ -0.24
POLR2J3-214ENST00000508910 ST5P78524 1137 aa13.53□□□□□ -0.24
POLR2J3-214ENST00000508910 SLC10A5Q5PT55 438 aa13.53□□□□□ -0.24
POLR2J3-214ENST00000508910 SLC16A10Q8TF71 515 aa13.53□□□□□ -0.24
POLR2J3-214ENST00000508910 RTL9Q8NET4 1388 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms