RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 CDCA7LQ96GN5 454 aa23.45■■□□□ 1.34
CLDND1-220ENST00000508902 ATP5J2-PTCD1G3V325 749 aa23.44■■□□□ 1.34
CLDND1-220ENST00000508902 GOLGA2Q08379 1002 aa23.44■■□□□ 1.34
CLDND1-220ENST00000508902 CRY2Q49AN0 593 aa23.44■■□□□ 1.34
CLDND1-220ENST00000508902 PARP10Q53GL7 1025 aa23.44■■□□□ 1.34
CLDND1-220ENST00000508902 TTLL6Q8N841 843 aa23.44■■□□□ 1.34
CLDND1-220ENST00000508902 ZNF622Q969S3 477 aaKnown RBP eCLIP23.44■■□□□ 1.34
CLDND1-220ENST00000508902 CCDC88AQ3V6T2 1871 aa23.44■■□□□ 1.34
CLDND1-220ENST00000508902 TAF1P21675 1872 aa23.43■■□□□ 1.34
CLDND1-220ENST00000508902 NPHP1O15259 732 aa23.43■■□□□ 1.34
CLDND1-220ENST00000508902 STYK1Q6J9G0 422 aa23.43■■□□□ 1.34
CLDND1-220ENST00000508902 NYXQ9GZU5 481 aa23.43■■□□□ 1.34
CLDND1-220ENST00000508902 RASSF7Q02833 373 aa23.42■■□□□ 1.34
CLDND1-220ENST00000508902 SLFN5Q08AF3 891 aa23.42■■□□□ 1.34
CLDND1-220ENST00000508902 HSP90AB3PQ58FF7 597 aa23.42■■□□□ 1.34
CLDND1-220ENST00000508902 MYH16Q9H6N6 1097 aa23.42■■□□□ 1.34
CLDND1-220ENST00000508902 SNED1Q8TER0 1413 aa23.42■■□□□ 1.34
CLDND1-220ENST00000508902 PRPF40BQ6NWY9 871 aaKnown RBP23.41■■□□□ 1.34
CLDND1-220ENST00000508902 ARHGAP27Q6ZUM4 889 aa23.41■■□□□ 1.34
CLDND1-220ENST00000508902 ZNF784Q8NCA9 323 aaPredicted RBP23.41■■□□□ 1.34
CLDND1-220ENST00000508902 MASTLQ96GX5 879 aa23.41■■□□□ 1.34
CLDND1-220ENST00000508902 UTP14AQ9BVJ6 771 aaKnown RBP23.41■■□□□ 1.34
CLDND1-220ENST00000508902 PDZRN3Q9UPQ7 1066 aa23.41■■□□□ 1.34
CLDND1-220ENST00000508902 NFKBIEO00221 500 aa23.4■■□□□ 1.34
CLDND1-220ENST00000508902 C7orf43Q8WVR3 580 aa23.4■■□□□ 1.34
CLDND1-220ENST00000508902 SLC4A2P04920 1241 aa23.39■■□□□ 1.33
CLDND1-220ENST00000508902 SLC10A5Q5PT55 438 aa23.39■■□□□ 1.33
CLDND1-220ENST00000508902 OLFM4Q6UX06 510 aa23.39■■□□□ 1.33
CLDND1-220ENST00000508902 PPP1R42Q7Z4L9 355 aa23.39■■□□□ 1.33
CLDND1-220ENST00000508902 TRMT2AQ8IZ69 625 aaKnown RBP23.39■■□□□ 1.33
CLDND1-220ENST00000508902 ZNF219Q9P2Y4 722 aaPredicted RBP23.39■■□□□ 1.33
CLDND1-220ENST00000508902 C21orf2O43822 256 aa23.38■■□□□ 1.33
CLDND1-220ENST00000508902 HCLS1P14317 486 aaPredicted RBP23.38■■□□□ 1.33
CLDND1-220ENST00000508902 NPR1P16066 1061 aa23.38■■□□□ 1.33
CLDND1-220ENST00000508902 GTF2E1P29083 439 aaPredicted RBP23.38■■□□□ 1.33
CLDND1-220ENST00000508902 TRIM28Q13263 835 aaKnown RBP23.38■■□□□ 1.33
CLDND1-220ENST00000508902 RIC3Q7Z5B4 369 aa23.38■■□□□ 1.33
CLDND1-220ENST00000508902 MYD88Q99836 296 aa23.38■■□□□ 1.33
CLDND1-220ENST00000508902 MAP3K2Q9Y2U5 619 aa23.38■■□□□ 1.33
CLDND1-220ENST00000508902 TIAM2Q8IVF5 1701 aa23.37■■□□□ 1.33
CLDND1-220ENST00000508902 PI4KAP2A4QPH2 592 aa23.37■■□□□ 1.33
CLDND1-220ENST00000508902 IGKV5-2P06315 115 aa23.37■■□□□ 1.33
CLDND1-220ENST00000508902 PI4KAP1Q8N8J0 262 aa23.37■■□□□ 1.33
CLDND1-220ENST00000508902 METTL22Q9BUU2 404 aaPredicted RBP23.37■■□□□ 1.33
CLDND1-220ENST00000508902 STK31Q9BXU1 1019 aa23.37■■□□□ 1.33
CLDND1-220ENST00000508902 RNF123Q5XPI4 1314 aa23.36■■□□□ 1.33
CLDND1-220ENST00000508902 E9PSI1 815 aa23.36■■□□□ 1.33
CLDND1-220ENST00000508902 FLIIQ13045 1269 aa23.36■■□□□ 1.33
CLDND1-220ENST00000508902 KSR2Q6VAB6 950 aa23.36■■□□□ 1.33
CLDND1-220ENST00000508902 CNKSR1Q969H4 720 aa23.36■■□□□ 1.33
CLDND1-220ENST00000508902 FAM89AQ96GI7 184 aa23.36■■□□□ 1.33
CLDND1-220ENST00000508902 TRMT112Q9UI30 125 aaKnown RBP23.36■■□□□ 1.33
CLDND1-220ENST00000508902 HOXA10P31260 410 aaPredicted RBP23.35■■□□□ 1.33
CLDND1-220ENST00000508902 DICER1Q9UPY3 1922 aaKnown RBP23.35■■□□□ 1.33
CLDND1-220ENST00000508902 SH3TC1Q8TE82 1336 aa23.34■■□□□ 1.33
CLDND1-220ENST00000508902 RTL5Q5HYW3 569 aaPredicted RBP23.33■■□□□ 1.33
CLDND1-220ENST00000508902 C9orf131Q5VYM1 1079 aa23.33■■□□□ 1.33
CLDND1-220ENST00000508902 JARID2Q92833 1246 aaPredicted RBP23.33■■□□□ 1.33
CLDND1-220ENST00000508902 CHMP4AQ9BY43 222 aa23.32■■□□□ 1.32
CLDND1-220ENST00000508902 CWF19L2Q2TBE0 894 aaKnown RBP23.31■■□□□ 1.32
CLDND1-220ENST00000508902 ABCC4O15439 1325 aa23.31■■□□□ 1.32
CLDND1-220ENST00000508902 LRRC37AA6NMS7 1700 aa23.3■■□□□ 1.32
CLDND1-220ENST00000508902 DDX58O95786 925 aaKnown RBP23.3■■□□□ 1.32
CLDND1-220ENST00000508902 MYH3P11055 1940 aa23.29■■□□□ 1.32
CLDND1-220ENST00000508902 COL4A5P29400 1685 aa23.29■■□□□ 1.32
CLDND1-220ENST00000508902 F6X3S4 739 aa23.29■■□□□ 1.32
CLDND1-220ENST00000508902 CCDC191Q8NCU4 936 aa23.29■■□□□ 1.32
CLDND1-220ENST00000508902 NLRP3Q96P20 1036 aa23.29■■□□□ 1.32
CLDND1-220ENST00000508902 CRAMP1Q96RY5 1269 aa23.29■■□□□ 1.32
CLDND1-220ENST00000508902 NEURL1BA8MQ27 555 aa23.28■■□□□ 1.32
CLDND1-220ENST00000508902 FKBP5Q13451 457 aaPredicted RBP23.28■■□□□ 1.32
CLDND1-220ENST00000508902 MRPL50Q8N5N7 158 aaKnown RBP23.28■■□□□ 1.32
CLDND1-220ENST00000508902 ZBTB38Q8NAP3 1195 aaPredicted RBP23.28■■□□□ 1.32
CLDND1-220ENST00000508902 RPGRQ92834 1020 aaKnown RBP23.28■■□□□ 1.32
CLDND1-220ENST00000508902 CWC25Q9NXE8 425 aaPredicted RBP23.28■■□□□ 1.32
CLDND1-220ENST00000508902 RNF181Q9P0P0 153 aa23.28■■□□□ 1.32
CLDND1-220ENST00000508902 LTBP3Q9NS15 1303 aa23.28■■□□□ 1.32
CLDND1-220ENST00000508902 IRS4O14654 1257 aaPredicted RBP23.27■■□□□ 1.32
CLDND1-220ENST00000508902 PCCAP05165 728 aaPredicted RBP23.27■■□□□ 1.32
CLDND1-220ENST00000508902 DNAAF4Q8WXU2 420 aa23.27■■□□□ 1.32
CLDND1-220ENST00000508902 SSH1Q8WYL5 1049 aa23.27■■□□□ 1.32
CLDND1-220ENST00000508902 ALDH1B1P30837 517 aa23.26■■□□□ 1.31
CLDND1-220ENST00000508902 DUOX1Q9NRD9 1551 aa23.26■■□□□ 1.31
CLDND1-220ENST00000508902 LTBP1Q14766 1721 aa23.25■■□□□ 1.31
CLDND1-220ENST00000508902 SF3B3Q15393 1217 aaKnown RBP23.25■■□□□ 1.31
CLDND1-220ENST00000508902 BCL2L13Q9BXK5 485 aa23.25■■□□□ 1.31
CLDND1-220ENST00000508902 LMNB1P20700 586 aa23.24■■□□□ 1.31
CLDND1-220ENST00000508902 CASP7P55210 303 aa23.24■■□□□ 1.31
CLDND1-220ENST00000508902 HNRNPUQ00839 825 aaKnown RBP eCLIP23.24■■□□□ 1.31
CLDND1-220ENST00000508902 CCDC93Q567U6 631 aa23.24■■□□□ 1.31
CLDND1-220ENST00000508902 ZNF526Q8TF50 670 aaPredicted RBP23.24■■□□□ 1.31
CLDND1-220ENST00000508902 RBM17Q96I25 401 aaKnown RBP23.24■■□□□ 1.31
CLDND1-220ENST00000508902 PPEF1O14829 653 aaPredicted RBP23.23■■□□□ 1.31
CLDND1-220ENST00000508902 BEND3Q5T5X7 828 aa23.23■■□□□ 1.31
CLDND1-220ENST00000508902 TAOK3Q9H2K8 898 aa23.23■■□□□ 1.31
CLDND1-220ENST00000508902 SPEF2Q9C093 1822 aa23.22■■□□□ 1.31
CLDND1-220ENST00000508902 CELF1Q92879 486 aaKnown RBP23.22■■□□□ 1.31
CLDND1-220ENST00000508902 CDHR2Q9BYE9 1310 aa23.22■■□□□ 1.31
CLDND1-220ENST00000508902 H7C1W4 665 aa23.21■■□□□ 1.31
CLDND1-220ENST00000508902 FKBP4Q02790 459 aaKnown RBP eCLIP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms