RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 ITGB4P16144 1822 aa14.07□□□□□ -0.16
PRPF40B-203ENST00000508736 PTCD1O75127 700 aaKnown RBP14.06□□□□□ -0.16
PRPF40B-203ENST00000508736 NUCB2P80303 420 aa14.06□□□□□ -0.16
PRPF40B-203ENST00000508736 RABL6Q3YEC7 729 aaPredicted RBP14.06□□□□□ -0.16
PRPF40B-203ENST00000508736 CWC22Q9HCG8 908 aaKnown RBP14.06□□□□□ -0.16
PRPF40B-203ENST00000508736 IL1RAPL2Q9NP60 686 aa14.06□□□□□ -0.16
PRPF40B-203ENST00000508736 FOXD4L1Q9NU39 408 aa14.06□□□□□ -0.16
PRPF40B-203ENST00000508736 TTC41PQ6P2S7 1318 aa14.06□□□□□ -0.16
PRPF40B-203ENST00000508736 ESYT1Q9BSJ8 1104 aa14.06□□□□□ -0.16
PRPF40B-203ENST00000508736 ATG3Q9NT62 314 aa14.06□□□□□ -0.16
PRPF40B-203ENST00000508736 THSD7AQ9UPZ6 1657 aa14.05□□□□□ -0.16
PRPF40B-203ENST00000508736 AFDNP55196 1824 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-203ENST00000508736 TRIM6-TRIM34B2RNG4 842 aa14.05□□□□□ -0.16
PRPF40B-203ENST00000508736 EPB41L2O43491 1005 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-203ENST00000508736 PIP4K2AP48426 406 aaPredicted RBP14.05□□□□□ -0.16
PRPF40B-203ENST00000508736 CLEC17AQ6ZS10 378 aa14.05□□□□□ -0.16
PRPF40B-203ENST00000508736 KRT27Q7Z3Y8 459 aa14.05□□□□□ -0.16
PRPF40B-203ENST00000508736 CLASRPQ8N2M8 674 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-203ENST00000508736 PI4K2BQ8TCG2 481 aa14.05□□□□□ -0.16
PRPF40B-203ENST00000508736 FSD2A1L4K1 749 aa14.04□□□□□ -0.16
PRPF40B-203ENST00000508736 A1BGP04217 495 aa14.04□□□□□ -0.16
PRPF40B-203ENST00000508736 MCM2P49736 904 aa14.04□□□□□ -0.16
PRPF40B-203ENST00000508736 CASP7P55210 303 aa14.04□□□□□ -0.16
PRPF40B-203ENST00000508736 OS9Q13438 667 aaPredicted RBP14.04□□□□□ -0.16
PRPF40B-203ENST00000508736 GZF1Q9H116 711 aaPredicted RBP14.04□□□□□ -0.16
PRPF40B-203ENST00000508736 H7C1W4 665 aa14.04□□□□□ -0.16
PRPF40B-203ENST00000508736 ANAPC15P60006 121 aa14.04□□□□□ -0.16
PRPF40B-203ENST00000508736 CCDC191Q8NCU4 936 aa14.04□□□□□ -0.16
PRPF40B-203ENST00000508736 RILPL2Q969X0 211 aa14.04□□□□□ -0.16
PRPF40B-203ENST00000508736 COPRSQ9NQ92 184 aa14.04□□□□□ -0.16
PRPF40B-203ENST00000508736 ASAP1Q9ULH1 1129 aa14.04□□□□□ -0.16
PRPF40B-203ENST00000508736 A0A087WZG4 1122 aa14.03□□□□□ -0.16
PRPF40B-203ENST00000508736 STARD3NLO95772 234 aa14.03□□□□□ -0.16
PRPF40B-203ENST00000508736 CHMLP26374 656 aa14.03□□□□□ -0.16
PRPF40B-203ENST00000508736 G3BP1Q13283 466 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRPF40B-203ENST00000508736 TTLL7Q6ZT98 887 aa14.03□□□□□ -0.16
PRPF40B-203ENST00000508736 NUTM1Q86Y26 1132 aa14.03□□□□□ -0.16
PRPF40B-203ENST00000508736 GLRX3O76003 335 aaKnown RBP14.02□□□□□ -0.16
PRPF40B-203ENST00000508736 TSHZ3Q63HK5 1081 aa14.02□□□□□ -0.16
PRPF40B-203ENST00000508736 SYTL4Q96C24 671 aaPredicted RBP14.02□□□□□ -0.16
PRPF40B-203ENST00000508736 ACSBG1Q96GR2 724 aa14.02□□□□□ -0.16
PRPF40B-203ENST00000508736 CWC25Q9NXE8 425 aaPredicted RBP14.02□□□□□ -0.16
PRPF40B-203ENST00000508736 SASH1O94885 1247 aa14.01□□□□□ -0.17
PRPF40B-203ENST00000508736 SSFA2P28290 1259 aa14.01□□□□□ -0.17
PRPF40B-203ENST00000508736 PRIM1P49642 420 aaKnown RBP14.01□□□□□ -0.17
PRPF40B-203ENST00000508736 MRE11P49959 708 aa14.01□□□□□ -0.17
PRPF40B-203ENST00000508736 TRIM28Q13263 835 aaKnown RBP14.01□□□□□ -0.17
PRPF40B-203ENST00000508736 EPHA10Q5JZY3 1008 aa14.01□□□□□ -0.17
PRPF40B-203ENST00000508736 UBE3BQ7Z3V4 1068 aa14.01□□□□□ -0.17
PRPF40B-203ENST00000508736 GPATCH3Q96I76 525 aa14.01□□□□□ -0.17
PRPF40B-203ENST00000508736 PA2G4Q9UQ80 394 aaKnown RBP14.01□□□□□ -0.17
PRPF40B-203ENST00000508736 KAT6BQ8WYB5 2073 aa14.01□□□□□ -0.17
PRPF40B-203ENST00000508736 RFX5P48382 616 aaPredicted RBP14.01□□□□□ -0.17
PRPF40B-203ENST00000508736 DNAJC10Q8IXB1 793 aa14.01□□□□□ -0.17
PRPF40B-203ENST00000508736 ANO2Q9NQ90 1003 aa14.01□□□□□ -0.17
PRPF40B-203ENST00000508736 ECHDC1Q9NTX5 307 aa14.01□□□□□ -0.17
PRPF40B-203ENST00000508736 TJP1Q07157 1748 aa14.01□□□□□ -0.17
PRPF40B-203ENST00000508736 ATP5J2-PTCD1G3V325 749 aa14□□□□□ -0.17
PRPF40B-203ENST00000508736 CNTROBQ8N137 903 aa14□□□□□ -0.17
PRPF40B-203ENST00000508736 ISCA1Q9BUE6 129 aa14□□□□□ -0.17
PRPF40B-203ENST00000508736 BRWD3Q6RI45 1802 aa14□□□□□ -0.17
PRPF40B-203ENST00000508736 BAG4O95429 457 aaKnown RBP13.99□□□□□ -0.17
PRPF40B-203ENST00000508736 IFIT2P09913 472 aaKnown RBP13.99□□□□□ -0.17
PRPF40B-203ENST00000508736 PTPN12Q05209 780 aaKnown RBP13.99□□□□□ -0.17
PRPF40B-203ENST00000508736 DOT1LQ8TEK3 1739 aa13.99□□□□□ -0.17
PRPF40B-203ENST00000508736 CICQ96RK0 1608 aaPredicted RBP13.99□□□□□ -0.17
PRPF40B-203ENST00000508736 KCNQ2O43526 872 aa13.99□□□□□ -0.17
PRPF40B-203ENST00000508736 NEK4P51957 841 aa13.99□□□□□ -0.17
PRPF40B-203ENST00000508736 TCIRG1Q13488 830 aa13.99□□□□□ -0.17
PRPF40B-203ENST00000508736 FAM196AQ6ZSG2 479 aa13.99□□□□□ -0.17
PRPF40B-203ENST00000508736 IL17RAQ96F46 866 aa13.99□□□□□ -0.17
PRPF40B-203ENST00000508736 CYP19A1P11511 503 aaPredicted RBP13.98□□□□□ -0.17
PRPF40B-203ENST00000508736 KIF6Q6ZMV9 814 aa13.98□□□□□ -0.17
PRPF40B-203ENST00000508736 FAM43AQ8N2R8 423 aa13.98□□□□□ -0.17
PRPF40B-203ENST00000508736 ZBTB3Q9H5J0 574 aa13.98□□□□□ -0.17
PRPF40B-203ENST00000508736 RTN4Q9NQC3 1192 aaKnown RBP13.98□□□□□ -0.17
PRPF40B-203ENST00000508736 CYP2E1P05181 493 aaPredicted RBP13.97□□□□□ -0.17
PRPF40B-203ENST00000508736 XRCC6P12956 609 aaKnown RBP eCLIP13.97□□□□□ -0.17
PRPF40B-203ENST00000508736 FOXO4P98177 505 aa13.97□□□□□ -0.17
PRPF40B-203ENST00000508736 AACSQ86V21 672 aa13.97□□□□□ -0.17
PRPF40B-203ENST00000508736 SLC4A9Q96Q91 983 aa13.97□□□□□ -0.17
PRPF40B-203ENST00000508736 HSP90AB3PQ58FF7 597 aa13.97□□□□□ -0.17
PRPF40B-203ENST00000508736 EAF2Q96CJ1 260 aaPredicted RBP13.97□□□□□ -0.17
PRPF40B-203ENST00000508736 MAP3K15Q6ZN16 1313 aa13.96□□□□□ -0.17
PRPF40B-203ENST00000508736 EP400Q96L91 3159 aa13.96□□□□□ -0.17
PRPF40B-203ENST00000508736 KLHL40Q2TBA0 621 aa13.96□□□□□ -0.17
PRPF40B-203ENST00000508736 GIGYF2Q6Y7W6 1299 aaKnown RBP13.96□□□□□ -0.17
PRPF40B-203ENST00000508736 PTF1AQ7RTS3 328 aa13.96□□□□□ -0.17
PRPF40B-203ENST00000508736 GRPEL1Q9HAV7 217 aa13.96□□□□□ -0.17
PRPF40B-203ENST00000508736 TRIM37O94972 964 aa13.95□□□□□ -0.18
PRPF40B-203ENST00000508736 IL6STP40189 918 aaPredicted RBP13.95□□□□□ -0.18
PRPF40B-203ENST00000508736 LMBR1LQ6UX01 489 aa13.95□□□□□ -0.18
PRPF40B-203ENST00000508736 EVI5LQ96CN4 794 aa13.95□□□□□ -0.18
PRPF40B-203ENST00000508736 ARXQ96QS3 562 aa13.95□□□□□ -0.18
PRPF40B-203ENST00000508736 PLA2G12BQ9BX93 195 aa13.95□□□□□ -0.18
PRPF40B-203ENST00000508736 DDX49Q9Y6V7 483 aaKnown RBP13.95□□□□□ -0.18
PRPF40B-203ENST00000508736 INTS4Q96HW7 963 aaKnown RBP13.95□□□□□ -0.18
PRPF40B-203ENST00000508736 TMX3Q96JJ7 454 aa13.95□□□□□ -0.18
PRPF40B-203ENST00000508736 SIL1Q9H173 461 aa13.95□□□□□ -0.18
PRPF40B-203ENST00000508736 ERVV-1B6SEH8 477 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms