RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 AAMPQ13685 434 aa13.84□□□□□ -0.19
BRCC3P1-201ENST00000508559 R3HDM1Q15032 1099 aaKnown RBP13.84□□□□□ -0.19
BRCC3P1-201ENST00000508559 RTL5Q5HYW3 569 aaPredicted RBP13.84□□□□□ -0.19
BRCC3P1-201ENST00000508559 TBC1D9BQ66K14 1250 aa13.84□□□□□ -0.19
BRCC3P1-201ENST00000508559 MSL1Q68DK7 614 aa13.84□□□□□ -0.19
BRCC3P1-201ENST00000508559 UBE3BQ7Z3V4 1068 aa13.84□□□□□ -0.19
BRCC3P1-201ENST00000508559 NLRP10Q86W26 655 aa13.84□□□□□ -0.19
BRCC3P1-201ENST00000508559 NBPF5PQ86XG9 351 aaPredicted RBP13.84□□□□□ -0.19
BRCC3P1-201ENST00000508559 MEIS3Q99687 375 aa13.84□□□□□ -0.19
BRCC3P1-201ENST00000508559 NYXQ9GZU5 481 aa13.84□□□□□ -0.19
BRCC3P1-201ENST00000508559 GNAI2P04899 355 aa13.83□□□□□ -0.2
BRCC3P1-201ENST00000508559 HSP90B1P14625 803 aaKnown RBP13.83□□□□□ -0.2
BRCC3P1-201ENST00000508559 BCL2L12Q9HB09 334 aa13.83□□□□□ -0.2
BRCC3P1-201ENST00000508559 ZBTB7BO15156 539 aaPredicted RBP13.82□□□□□ -0.2
BRCC3P1-201ENST00000508559 ERICH6BQ5W0A0 696 aa13.82□□□□□ -0.2
BRCC3P1-201ENST00000508559 TPTE2Q6XPS3 522 aa13.82□□□□□ -0.2
BRCC3P1-201ENST00000508559 SLC16A10Q8TF71 515 aa13.82□□□□□ -0.2
BRCC3P1-201ENST00000508559 JARID2Q92833 1246 aaPredicted RBP13.82□□□□□ -0.2
BRCC3P1-201ENST00000508559 USP44Q9H0E7 712 aa13.82□□□□□ -0.2
BRCC3P1-201ENST00000508559 PARP3Q9Y6F1 533 aa13.82□□□□□ -0.2
BRCC3P1-201ENST00000508559 CARMIL3Q8ND23 1372 aa13.82□□□□□ -0.2
BRCC3P1-201ENST00000508559 PCCAP05165 728 aaPredicted RBP13.81□□□□□ -0.2
BRCC3P1-201ENST00000508559 NFIXQ14938 502 aa13.81□□□□□ -0.2
BRCC3P1-201ENST00000508559 SUSD4Q5VX71 490 aa13.81□□□□□ -0.2
BRCC3P1-201ENST00000508559 ZBTB38Q8NAP3 1195 aaPredicted RBP13.81□□□□□ -0.2
BRCC3P1-201ENST00000508559 FAM89AQ96GI7 184 aa13.81□□□□□ -0.2
BRCC3P1-201ENST00000508559 UBN2Q6ZU65 1347 aa13.81□□□□□ -0.2
BRCC3P1-201ENST00000508559 SH3TC1Q8TE82 1336 aa13.81□□□□□ -0.2
BRCC3P1-201ENST00000508559 SCN7AQ01118 1682 aa13.81□□□□□ -0.2
BRCC3P1-201ENST00000508559 NUP98P52948 1817 aa13.8□□□□□ -0.2
BRCC3P1-201ENST00000508559 PSDA5PKW4 1024 aaPredicted RBP13.8□□□□□ -0.2
BRCC3P1-201ENST00000508559 NBPF7P0C2Y1 421 aaPredicted RBP13.8□□□□□ -0.2
BRCC3P1-201ENST00000508559 ST5P78524 1137 aa13.8□□□□□ -0.2
BRCC3P1-201ENST00000508559 CNBD1Q8NA66 436 aa13.8□□□□□ -0.2
BRCC3P1-201ENST00000508559 C1orf115Q9H7X2 142 aa13.8□□□□□ -0.2
BRCC3P1-201ENST00000508559 ZBTB40Q9NUA8 1239 aa13.8□□□□□ -0.2
BRCC3P1-201ENST00000508559 GTF3C3Q9Y5Q9 886 aa13.8□□□□□ -0.2
BRCC3P1-201ENST00000508559 LRRFIP2Q9Y608 721 aaKnown RBP13.8□□□□□ -0.2
BRCC3P1-201ENST00000508559 C4AP0C0L4 1744 aa13.8□□□□□ -0.2
BRCC3P1-201ENST00000508559 BCORQ6W2J9 1755 aa13.8□□□□□ -0.2
BRCC3P1-201ENST00000508559 AFDNP55196 1824 aaKnown RBP13.8□□□□□ -0.2
BRCC3P1-201ENST00000508559 H7C1W4 665 aa13.79□□□□□ -0.2
BRCC3P1-201ENST00000508559 IRS4O14654 1257 aaPredicted RBP13.79□□□□□ -0.2
BRCC3P1-201ENST00000508559 SERPINB2P05120 415 aa13.79□□□□□ -0.2
BRCC3P1-201ENST00000508559 MMP10P09238 476 aa13.79□□□□□ -0.2
BRCC3P1-201ENST00000508559 CHMP3Q9Y3E7 222 aa13.79□□□□□ -0.2
BRCC3P1-201ENST00000508559 TUBGCP6Q96RT7 1819 aa13.78□□□□□ -0.2
BRCC3P1-201ENST00000508559 ZBTB7AO95365 584 aa13.78□□□□□ -0.2
BRCC3P1-201ENST00000508559 NTSR2O95665 410 aa13.78□□□□□ -0.2
BRCC3P1-201ENST00000508559 POLD1P28340 1107 aa13.78□□□□□ -0.2
BRCC3P1-201ENST00000508559 TM4SF1P30408 202 aa13.78□□□□□ -0.2
BRCC3P1-201ENST00000508559 NUTM1Q86Y26 1132 aa13.78□□□□□ -0.2
BRCC3P1-201ENST00000508559 SUCLG2Q96I99 432 aa13.78□□□□□ -0.2
BRCC3P1-201ENST00000508559 ANKRD36CQ5JPF3 1778 aa13.78□□□□□ -0.2
BRCC3P1-201ENST00000508559 UTYO14607 1347 aa13.77□□□□□ -0.21
BRCC3P1-201ENST00000508559 HMMRO75330 724 aa13.77□□□□□ -0.21
BRCC3P1-201ENST00000508559 HCLS1P14317 486 aaPredicted RBP13.77□□□□□ -0.21
BRCC3P1-201ENST00000508559 ERFEQ4G0M1 354 aa13.77□□□□□ -0.21
BRCC3P1-201ENST00000508559 CCDC136Q96JN2 1154 aa13.77□□□□□ -0.21
BRCC3P1-201ENST00000508559 PDGFDQ9GZP0 370 aaPredicted RBP13.77□□□□□ -0.21
BRCC3P1-201ENST00000508559 PPP4R2Q9NY27 417 aa13.77□□□□□ -0.21
BRCC3P1-201ENST00000508559 IBTKQ9P2D0 1353 aaPredicted RBP13.77□□□□□ -0.21
BRCC3P1-201ENST00000508559 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
BRCC3P1-201ENST00000508559 QSER1Q2KHR3 1735 aa13.76□□□□□ -0.21
BRCC3P1-201ENST00000508559 CDHR2Q9BYE9 1310 aa13.76□□□□□ -0.21
BRCC3P1-201ENST00000508559 POLRMTO00411 1230 aaKnown RBP13.76□□□□□ -0.21
BRCC3P1-201ENST00000508559 SOCS7O14512 581 aa13.76□□□□□ -0.21
BRCC3P1-201ENST00000508559 PDE8AO60658 829 aa13.76□□□□□ -0.21
BRCC3P1-201ENST00000508559 DDR1Q08345 913 aa13.76□□□□□ -0.21
BRCC3P1-201ENST00000508559 SYNE4Q8N205 404 aa13.76□□□□□ -0.21
BRCC3P1-201ENST00000508559 MTFR1LQ9H019 292 aa13.76□□□□□ -0.21
BRCC3P1-201ENST00000508559 BICC1Q9H694 974 aaKnown RBP13.76□□□□□ -0.21
BRCC3P1-201ENST00000508559 N4BP2Q86UW6 1770 aaPredicted RBP13.76□□□□□ -0.21
BRCC3P1-201ENST00000508559 TAF7LQ5H9L4 462 aa13.75□□□□□ -0.21
BRCC3P1-201ENST00000508559 LMBR1LQ6UX01 489 aa13.75□□□□□ -0.21
BRCC3P1-201ENST00000508559 RPAP2Q8IXW5 612 aaPredicted RBP13.75□□□□□ -0.21
BRCC3P1-201ENST00000508559 CCDC24Q8N4L8 307 aa13.75□□□□□ -0.21
BRCC3P1-201ENST00000508559 NLRP3Q96P20 1036 aa13.75□□□□□ -0.21
BRCC3P1-201ENST00000508559 RWDD1Q9H446 243 aaPredicted RBP13.75□□□□□ -0.21
BRCC3P1-201ENST00000508559 SRGAP3O43295 1099 aa13.74□□□□□ -0.21
BRCC3P1-201ENST00000508559 CASP7P55210 303 aa13.74□□□□□ -0.21
BRCC3P1-201ENST00000508559 CTSWP56202 376 aa13.74□□□□□ -0.21
BRCC3P1-201ENST00000508559 CCDC152Q4G0S7 254 aa13.74□□□□□ -0.21
BRCC3P1-201ENST00000508559 PRR5LQ6MZQ0 368 aa13.74□□□□□ -0.21
BRCC3P1-201ENST00000508559 ATP8B2P98198 1209 aa13.73□□□□□ -0.21
BRCC3P1-201ENST00000508559 CCDC57Q2TAC2 916 aa13.73□□□□□ -0.21
BRCC3P1-201ENST00000508559 CEP85Q6P2H3 762 aa13.73□□□□□ -0.21
BRCC3P1-201ENST00000508559 ANKRD44Q8N8A2 993 aa13.73□□□□□ -0.21
BRCC3P1-201ENST00000508559 CCDC85AQ96PX6 553 aaPredicted RBP13.73□□□□□ -0.21
BRCC3P1-201ENST00000508559 PLA2G12BQ9BX93 195 aa13.73□□□□□ -0.21
BRCC3P1-201ENST00000508559 PCDHB15Q9Y5E8 787 aa13.73□□□□□ -0.21
BRCC3P1-201ENST00000508559 FOXO4P98177 505 aa13.72□□□□□ -0.21
BRCC3P1-201ENST00000508559 IFIT5Q13325 482 aaKnown RBP13.72□□□□□ -0.21
BRCC3P1-201ENST00000508559 OS9Q13438 667 aaPredicted RBP13.72□□□□□ -0.21
BRCC3P1-201ENST00000508559 EPHA10Q5JZY3 1008 aa13.72□□□□□ -0.21
BRCC3P1-201ENST00000508559 SLC10A5Q5PT55 438 aa13.72□□□□□ -0.21
BRCC3P1-201ENST00000508559 RPGRQ92834 1020 aaKnown RBP13.72□□□□□ -0.21
BRCC3P1-201ENST00000508559 ZBTB47Q9UFB7 747 aaPredicted RBP13.72□□□□□ -0.21
BRCC3P1-201ENST00000508559 PDE6BP35913 854 aa13.71□□□□□ -0.21
BRCC3P1-201ENST00000508559 SPON1Q9HCB6 807 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms