RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 SLX4Q8IY92 1834 aa15.89■□□□□ 0.13
PTPN20-218ENST00000508357 COL4A1P02462 1669 aa15.89■□□□□ 0.13
PTPN20-218ENST00000508357 ATP5J2-PTCD1G3V325 749 aa15.88■□□□□ 0.13
PTPN20-218ENST00000508357 SRGNP10124 158 aa15.88■□□□□ 0.13
PTPN20-218ENST00000508357 PDE6BP35913 854 aa15.88■□□□□ 0.13
PTPN20-218ENST00000508357 FLIIQ13045 1269 aa15.88■□□□□ 0.13
PTPN20-218ENST00000508357 TPTE2Q6XPS3 522 aa15.88■□□□□ 0.13
PTPN20-218ENST00000508357 NYXQ9GZU5 481 aa15.88■□□□□ 0.13
PTPN20-218ENST00000508357 PIM2Q9P1W9 311 aa15.88■□□□□ 0.13
PTPN20-218ENST00000508357 CHD4Q14839 1912 aa15.88■□□□□ 0.13
PTPN20-218ENST00000508357 NPHP1O15259 732 aa15.87■□□□□ 0.13
PTPN20-218ENST00000508357 MAP3K2Q9Y2U5 619 aa15.87■□□□□ 0.13
PTPN20-218ENST00000508357 PI4KAP2A4QPH2 592 aa15.86■□□□□ 0.13
PTPN20-218ENST00000508357 DCAF8L1A6NGE4 600 aa15.86■□□□□ 0.13
PTPN20-218ENST00000508357 H0YIN7 160 aa15.86■□□□□ 0.13
PTPN20-218ENST00000508357 IGKV5-2P06315 115 aa15.86■□□□□ 0.13
PTPN20-218ENST00000508357 CRY2Q49AN0 593 aa15.86■□□□□ 0.13
PTPN20-218ENST00000508357 DALRD3Q5D0E6 543 aaKnown RBP15.86■□□□□ 0.13
PTPN20-218ENST00000508357 RIC3Q7Z5B4 369 aa15.86■□□□□ 0.13
PTPN20-218ENST00000508357 SLC51AQ86UW1 340 aa15.86■□□□□ 0.13
PTPN20-218ENST00000508357 PI4KAP1Q8N8J0 262 aa15.86■□□□□ 0.13
PTPN20-218ENST00000508357 MYD88Q99836 296 aa15.86■□□□□ 0.13
PTPN20-218ENST00000508357 METTL22Q9BUU2 404 aaPredicted RBP15.86■□□□□ 0.13
PTPN20-218ENST00000508357 UTP14AQ9BVJ6 771 aaKnown RBP15.86■□□□□ 0.13
PTPN20-218ENST00000508357 CHMP4AQ9BY43 222 aa15.86■□□□□ 0.13
PTPN20-218ENST00000508357 RNF123Q5XPI4 1314 aa15.86■□□□□ 0.13
PTPN20-218ENST00000508357 TRIM28Q13263 835 aaKnown RBP15.85■□□□□ 0.13
PTPN20-218ENST00000508357 KSR2Q6VAB6 950 aa15.85■□□□□ 0.13
PTPN20-218ENST00000508357 PPP1R42Q7Z4L9 355 aa15.85■□□□□ 0.13
PTPN20-218ENST00000508357 GRIN3BO60391 1043 aa15.84■□□□□ 0.13
PTPN20-218ENST00000508357 STYK1Q6J9G0 422 aa15.84■□□□□ 0.13
PTPN20-218ENST00000508357 ZNF622Q969S3 477 aaKnown RBP eCLIP15.84■□□□□ 0.13
PTPN20-218ENST00000508357 ZBED9Q6R2W3 1325 aa15.84■□□□□ 0.13
PTPN20-218ENST00000508357 SNED1Q8TER0 1413 aa15.84■□□□□ 0.13
PTPN20-218ENST00000508357 DDX58O95786 925 aaKnown RBP15.83■□□□□ 0.12
PTPN20-218ENST00000508357 HCLS1P14317 486 aaPredicted RBP15.83■□□□□ 0.12
PTPN20-218ENST00000508357 SLC10A5Q5PT55 438 aa15.83■□□□□ 0.12
PTPN20-218ENST00000508357 PRPF40BQ6NWY9 871 aaKnown RBP15.83■□□□□ 0.12
PTPN20-218ENST00000508357 MRPL50Q8N5N7 158 aaKnown RBP15.83■□□□□ 0.12
PTPN20-218ENST00000508357 TTLL6Q8N841 843 aa15.83■□□□□ 0.12
PTPN20-218ENST00000508357 SSH1Q8WYL5 1049 aa15.83■□□□□ 0.12
PTPN20-218ENST00000508357 MASTLQ96GX5 879 aa15.83■□□□□ 0.12
PTPN20-218ENST00000508357 BCL2L13Q9BXK5 485 aa15.83■□□□□ 0.12
PTPN20-218ENST00000508357 TRMT112Q9UI30 125 aaKnown RBP15.83■□□□□ 0.12
PTPN20-218ENST00000508357 PDZRN3Q9UPQ7 1066 aa15.83■□□□□ 0.12
PTPN20-218ENST00000508357 FER1L6Q2WGJ9 1857 aa15.82■□□□□ 0.12
PTPN20-218ENST00000508357 F6X3S4 739 aa15.82■□□□□ 0.12
PTPN20-218ENST00000508357 NPR1P16066 1061 aa15.82■□□□□ 0.12
PTPN20-218ENST00000508357 GTF2E1P29083 439 aaPredicted RBP15.82■□□□□ 0.12
PTPN20-218ENST00000508357 FKBP5Q13451 457 aaPredicted RBP15.82■□□□□ 0.12
PTPN20-218ENST00000508357 CWF19L2Q2TBE0 894 aaKnown RBP15.82■□□□□ 0.12
PTPN20-218ENST00000508357 FAM89AQ96GI7 184 aa15.82■□□□□ 0.12
PTPN20-218ENST00000508357 SH3TC1Q8TE82 1336 aa15.82■□□□□ 0.12
PTPN20-218ENST00000508357 PRELPP51888 382 aa15.81■□□□□ 0.12
PTPN20-218ENST00000508357 RASSF7Q02833 373 aa15.81■□□□□ 0.12
PTPN20-218ENST00000508357 RTL5Q5HYW3 569 aaPredicted RBP15.81■□□□□ 0.12
PTPN20-218ENST00000508357 C7orf43Q8WVR3 580 aa15.81■□□□□ 0.12
PTPN20-218ENST00000508357 DNAAF4Q8WXU2 420 aa15.81■□□□□ 0.12
PTPN20-218ENST00000508357 TAF1P21675 1872 aa15.8■□□□□ 0.12
PTPN20-218ENST00000508357 LRRC37AA6NMS7 1700 aa15.8■□□□□ 0.12
PTPN20-218ENST00000508357 NEURL1BA8MQ27 555 aa15.8■□□□□ 0.12
PTPN20-218ENST00000508357 NFKBIEO00221 500 aa15.8■□□□□ 0.12
PTPN20-218ENST00000508357 HOXA10P31260 410 aaPredicted RBP15.8■□□□□ 0.12
PTPN20-218ENST00000508357 OLFM4Q6UX06 510 aa15.8■□□□□ 0.12
PTPN20-218ENST00000508357 CCDC191Q8NCU4 936 aa15.8■□□□□ 0.12
PTPN20-218ENST00000508357 JARID2Q92833 1246 aaPredicted RBP15.8■□□□□ 0.12
PTPN20-218ENST00000508357 CWC25Q9NXE8 425 aaPredicted RBP15.8■□□□□ 0.12
PTPN20-218ENST00000508357 SBF1O95248 1867 aa15.8■□□□□ 0.12
PTPN20-218ENST00000508357 ABCC4O15439 1325 aa15.79■□□□□ 0.12
PTPN20-218ENST00000508357 PCCAP05165 728 aaPredicted RBP15.79■□□□□ 0.12
PTPN20-218ENST00000508357 ZBTB38Q8NAP3 1195 aaPredicted RBP15.79■□□□□ 0.12
PTPN20-218ENST00000508357 CNKSR1Q969H4 720 aa15.79■□□□□ 0.12
PTPN20-218ENST00000508357 ZNF219Q9P2Y4 722 aaPredicted RBP15.79■□□□□ 0.12
PTPN20-218ENST00000508357 TIAM2Q8IVF5 1701 aa15.79■□□□□ 0.12
PTPN20-218ENST00000508357 C21orf2O43822 256 aa15.78■□□□□ 0.12
PTPN20-218ENST00000508357 YY1P25490 414 aa15.78■□□□□ 0.12
PTPN20-218ENST00000508357 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
PTPN20-218ENST00000508357 BEND3Q5T5X7 828 aa15.78■□□□□ 0.12
PTPN20-218ENST00000508357 ARHGAP27Q6ZUM4 889 aa15.78■□□□□ 0.12
PTPN20-218ENST00000508357 RNF216Q9NWF9 866 aaPredicted RBP15.78■□□□□ 0.12
PTPN20-218ENST00000508357 IRS4O14654 1257 aaPredicted RBP15.77■□□□□ 0.12
PTPN20-218ENST00000508357 CT47B1P0C2W7 299 aaPredicted RBP15.77■□□□□ 0.12
PTPN20-218ENST00000508357 CASP7P55210 303 aa15.77■□□□□ 0.12
PTPN20-218ENST00000508357 ALDH1L2Q3SY69 923 aa15.77■□□□□ 0.12
PTPN20-218ENST00000508357 NLRP3Q96P20 1036 aa15.77■□□□□ 0.12
PTPN20-218ENST00000508357 SMC4Q9NTJ3 1288 aa15.77■□□□□ 0.12
PTPN20-218ENST00000508357 MYH3P11055 1940 aa15.76■□□□□ 0.11
PTPN20-218ENST00000508357 CDHR2Q9BYE9 1310 aa15.76■□□□□ 0.11
PTPN20-218ENST00000508357 RARSP54136 660 aaKnown RBP15.76■□□□□ 0.11
PTPN20-218ENST00000508357 GCKRQ14397 625 aa15.76■□□□□ 0.11
PTPN20-218ENST00000508357 LINS1Q8NG48 757 aa15.76■□□□□ 0.11
PTPN20-218ENST00000508357 RPGRQ92834 1020 aaKnown RBP15.76■□□□□ 0.11
PTPN20-218ENST00000508357 CRAMP1Q96RY5 1269 aa15.76■□□□□ 0.11
PTPN20-218ENST00000508357 DUOX1Q9NRD9 1551 aa15.75■□□□□ 0.11
PTPN20-218ENST00000508357 LTBP1Q14766 1721 aa15.75■□□□□ 0.11
PTPN20-218ENST00000508357 NEXNQ0ZGT2 675 aa15.75■□□□□ 0.11
PTPN20-218ENST00000508357 PTPRCP08575 1304 aa15.74■□□□□ 0.11
PTPN20-218ENST00000508357 COL4A5P29400 1685 aa15.74■□□□□ 0.11
PTPN20-218ENST00000508357 H7C1W4 665 aa15.74■□□□□ 0.11
PTPN20-218ENST00000508357 SF3B3Q15393 1217 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms