RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 FRAT1Q92837 279 aaPredicted RBP12.98□□□□□ -0.33
HTT-204ENST00000508321 SRCIN1Q9C0H9 1055 aa12.98□□□□□ -0.33
HTT-204ENST00000508321 CWC25Q9NXE8 425 aaPredicted RBP12.98□□□□□ -0.33
HTT-204ENST00000508321 SH3TC1Q8TE82 1336 aa12.97□□□□□ -0.33
HTT-204ENST00000508321 NEURL1BA8MQ27 555 aa12.97□□□□□ -0.33
HTT-204ENST00000508321 F6X3S4 739 aa12.97□□□□□ -0.33
HTT-204ENST00000508321 NPHP1O15259 732 aa12.97□□□□□ -0.33
HTT-204ENST00000508321 NTSR2O95665 410 aa12.97□□□□□ -0.33
HTT-204ENST00000508321 CENPBP07199 599 aaPredicted RBP12.97□□□□□ -0.33
HTT-204ENST00000508321 PTGER2P43116 358 aa12.97□□□□□ -0.33
HTT-204ENST00000508321 ST5P78524 1137 aa12.97□□□□□ -0.33
HTT-204ENST00000508321 BEND3Q5T5X7 828 aa12.97□□□□□ -0.33
HTT-204ENST00000508321 TPTE2Q6XPS3 522 aa12.97□□□□□ -0.33
HTT-204ENST00000508321 BICDL1Q6ZP65 573 aa12.97□□□□□ -0.33
HTT-204ENST00000508321 UTP14AQ9BVJ6 771 aaKnown RBP12.97□□□□□ -0.33
HTT-204ENST00000508321 PDZRN3Q9UPQ7 1066 aa12.97□□□□□ -0.33
HTT-204ENST00000508321 KIAA1551Q9HCM1 1747 aa12.96□□□□□ -0.33
HTT-204ENST00000508321 TNRC6CQ9HCJ0 1690 aaKnown RBP12.96□□□□□ -0.33
HTT-204ENST00000508321 CDHR2Q9BYE9 1310 aa12.96□□□□□ -0.33
HTT-204ENST00000508321 SERPINB2P05120 415 aa12.96□□□□□ -0.33
HTT-204ENST00000508321 IGKV5-2P06315 115 aa12.96□□□□□ -0.33
HTT-204ENST00000508321 GPTP24298 496 aa12.96□□□□□ -0.33
HTT-204ENST00000508321 INTS3Q68E01 1043 aaKnown RBP12.96□□□□□ -0.33
HTT-204ENST00000508321 SLC4A10Q6U841 1118 aa12.96□□□□□ -0.33
HTT-204ENST00000508321 DZIP1LQ8IYY4 767 aaKnown RBP12.96□□□□□ -0.33
HTT-204ENST00000508321 ZBTB38Q8NAP3 1195 aaPredicted RBP12.96□□□□□ -0.33
HTT-204ENST00000508321 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
HTT-204ENST00000508321 COL11A2P13942 1736 aaPredicted RBP12.96□□□□□ -0.34
HTT-204ENST00000508321 ATP5J2-PTCD1G3V325 749 aa12.95□□□□□ -0.34
HTT-204ENST00000508321 PCCAP05165 728 aaPredicted RBP12.95□□□□□ -0.34
HTT-204ENST00000508321 RRP1P56182 461 aaKnown RBP12.95□□□□□ -0.34
HTT-204ENST00000508321 GCKRQ14397 625 aa12.95□□□□□ -0.34
HTT-204ENST00000508321 PDE3AQ14432 1141 aa12.95□□□□□ -0.34
HTT-204ENST00000508321 PRR5LQ6MZQ0 368 aa12.95□□□□□ -0.34
HTT-204ENST00000508321 HDAC5Q9UQL6 1122 aa12.95□□□□□ -0.34
HTT-204ENST00000508321 BRCA1P38398 1863 aaKnown RBP12.95□□□□□ -0.34
HTT-204ENST00000508321 GTF2E1P29083 439 aaPredicted RBP12.94□□□□□ -0.34
HTT-204ENST00000508321 CWF19L2Q2TBE0 894 aaKnown RBP12.94□□□□□ -0.34
HTT-204ENST00000508321 SUSD4Q5VX71 490 aa12.94□□□□□ -0.34
HTT-204ENST00000508321 CHMP4BQ9H444 224 aaKnown RBP12.94□□□□□ -0.34
HTT-204ENST00000508321 TRMT112Q9UI30 125 aaKnown RBP12.94□□□□□ -0.34
HTT-204ENST00000508321 ABCC12Q96J65 1359 aa12.94□□□□□ -0.34
HTT-204ENST00000508321 UTYO14607 1347 aa12.93□□□□□ -0.34
HTT-204ENST00000508321 GRM8O00222 908 aa12.93□□□□□ -0.34
HTT-204ENST00000508321 BRIP1Q9BX63 1249 aa12.93□□□□□ -0.34
HTT-204ENST00000508321 CD2APQ9Y5K6 639 aa12.93□□□□□ -0.34
HTT-204ENST00000508321 PDE6BP35913 854 aa12.92□□□□□ -0.34
HTT-204ENST00000508321 SLC10A5Q5PT55 438 aa12.92□□□□□ -0.34
HTT-204ENST00000508321 C9orf78Q9NZ63 289 aaPredicted RBP12.92□□□□□ -0.34
HTT-204ENST00000508321 PPP1R1BQ9UD71 204 aaPredicted RBP12.92□□□□□ -0.34
HTT-204ENST00000508321 H7C1W4 665 aa12.91□□□□□ -0.34
HTT-204ENST00000508321 GNAI3P08754 354 aa12.91□□□□□ -0.34
HTT-204ENST00000508321 UBE3BQ7Z3V4 1068 aa12.91□□□□□ -0.34
HTT-204ENST00000508321 CLUAP1Q96AJ1 413 aa12.91□□□□□ -0.34
HTT-204ENST00000508321 PLA2G12BQ9BX93 195 aa12.91□□□□□ -0.34
HTT-204ENST00000508321 DDX19BQ9UMR2 479 aa12.91□□□□□ -0.34
HTT-204ENST00000508321 IRS4O14654 1257 aaPredicted RBP12.9□□□□□ -0.34
HTT-204ENST00000508321 TGFB2P61812 414 aa12.9□□□□□ -0.34
HTT-204ENST00000508321 MVPQ14764 893 aaKnown RBP12.9□□□□□ -0.34
HTT-204ENST00000508321 ERFEQ4G0M1 354 aa12.9□□□□□ -0.34
HTT-204ENST00000508321 NUTM1Q86Y26 1132 aa12.9□□□□□ -0.34
HTT-204ENST00000508321 ITPRIPQ8IWB1 547 aa12.9□□□□□ -0.34
HTT-204ENST00000508321 TMEM57Q8N5G2 664 aa12.9□□□□□ -0.34
HTT-204ENST00000508321 RTL9Q8NET4 1388 aa12.9□□□□□ -0.34
HTT-204ENST00000508321 KLRG2A4D1S0 409 aaPredicted RBP12.89□□□□□ -0.35
HTT-204ENST00000508321 FAM177BA6PVY3 158 aa12.89□□□□□ -0.35
HTT-204ENST00000508321 PDE8AO60658 829 aa12.89□□□□□ -0.35
HTT-204ENST00000508321 UBTFL1P0CB47 393 aaPredicted RBP12.89□□□□□ -0.35
HTT-204ENST00000508321 RLBP1P12271 317 aa12.89□□□□□ -0.35
HTT-204ENST00000508321 CASP7P55210 303 aa12.89□□□□□ -0.35
HTT-204ENST00000508321 CRY2Q49AN0 593 aa12.89□□□□□ -0.35
HTT-204ENST00000508321 FAM89AQ96GI7 184 aa12.89□□□□□ -0.35
HTT-204ENST00000508321 NLRP3Q96P20 1036 aa12.89□□□□□ -0.35
HTT-204ENST00000508321 ARFGEF1Q9Y6D6 1849 aa12.89□□□□□ -0.35
HTT-204ENST00000508321 CACNA1SQ13698 1873 aa12.89□□□□□ -0.35
HTT-204ENST00000508321 YY1P25490 414 aa12.88□□□□□ -0.35
HTT-204ENST00000508321 CTSWP56202 376 aa12.88□□□□□ -0.35
HTT-204ENST00000508321 PANK1Q8TE04 598 aa12.88□□□□□ -0.35
HTT-204ENST00000508321 USP44Q9H0E7 712 aa12.88□□□□□ -0.35
HTT-204ENST00000508321 LRRC37AA6NMS7 1700 aa12.88□□□□□ -0.35
HTT-204ENST00000508321 PLIN1O60240 522 aa12.87□□□□□ -0.35
HTT-204ENST00000508321 AAMPQ13685 434 aa12.87□□□□□ -0.35
HTT-204ENST00000508321 SF3B3Q15393 1217 aaKnown RBP12.87□□□□□ -0.35
HTT-204ENST00000508321 CCDC152Q4G0S7 254 aa12.87□□□□□ -0.35
HTT-204ENST00000508321 FHDC1Q9C0D6 1143 aaPredicted RBP12.87□□□□□ -0.35
HTT-204ENST00000508321 TNNQ9UQP3 1299 aa12.87□□□□□ -0.35
HTT-204ENST00000508321 H0YIN7 160 aa12.86□□□□□ -0.35
HTT-204ENST00000508321 NBPF7P0C2Y1 421 aaPredicted RBP12.86□□□□□ -0.35
HTT-204ENST00000508321 NPR1P16066 1061 aa12.86□□□□□ -0.35
HTT-204ENST00000508321 STYK1Q6J9G0 422 aa12.86□□□□□ -0.35
HTT-204ENST00000508321 RPGRQ92834 1020 aaKnown RBP12.86□□□□□ -0.35
HTT-204ENST00000508321 MASTLQ96GX5 879 aa12.86□□□□□ -0.35
HTT-204ENST00000508321 MEIS3Q99687 375 aa12.86□□□□□ -0.35
HTT-204ENST00000508321 SRGNP10124 158 aa12.85□□□□□ -0.35
HTT-204ENST00000508321 HCLS1P14317 486 aaPredicted RBP12.85□□□□□ -0.35
HTT-204ENST00000508321 HOXA10P31260 410 aaPredicted RBP12.85□□□□□ -0.35
HTT-204ENST00000508321 RABL6Q3YEC7 729 aaPredicted RBP12.85□□□□□ -0.35
HTT-204ENST00000508321 TMC4Q7Z404 712 aa12.85□□□□□ -0.35
HTT-204ENST00000508321 C2CD5Q86YS7 1000 aa12.85□□□□□ -0.35
HTT-204ENST00000508321 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms