RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 CCDC85CA6NKD9 419 aa12.37□□□□□ -0.43
CAST-220ENST00000508117 A1BGP04217 495 aa12.37□□□□□ -0.43
CAST-220ENST00000508117 MAP2K2P36507 400 aa12.37□□□□□ -0.43
CAST-220ENST00000508117 TEFQ10587 303 aa12.37□□□□□ -0.43
CAST-220ENST00000508117 NBPF5PQ86XG9 351 aaPredicted RBP12.37□□□□□ -0.43
CAST-220ENST00000508117 DZIP3Q86Y13 1208 aaKnown RBP12.37□□□□□ -0.43
CAST-220ENST00000508117 CAPNS2Q96L46 248 aa12.37□□□□□ -0.43
CAST-220ENST00000508117 PSMD1Q99460 953 aa12.37□□□□□ -0.43
CAST-220ENST00000508117 ZNF330Q9Y3S2 320 aaPredicted RBP12.37□□□□□ -0.43
CAST-220ENST00000508117 KNSTRNQ9Y448 316 aa12.37□□□□□ -0.43
CAST-220ENST00000508117 PDE4DIPQ5VU43 2346 aa12.36□□□□□ -0.43
CAST-220ENST00000508117 CA12O43570 354 aa12.36□□□□□ -0.43
CAST-220ENST00000508117 ALDH1B1P30837 517 aa12.36□□□□□ -0.43
CAST-220ENST00000508117 LHX8Q68G74 356 aa12.36□□□□□ -0.43
CAST-220ENST00000508117 TPTE2Q6XPS3 522 aa12.36□□□□□ -0.43
CAST-220ENST00000508117 PLCD3Q8N3E9 789 aa12.36□□□□□ -0.43
CAST-220ENST00000508117 IL17REQ8NFR9 667 aa12.36□□□□□ -0.43
CAST-220ENST00000508117 GPR101Q96P66 508 aaPredicted RBP12.36□□□□□ -0.43
CAST-220ENST00000508117 ZNF652Q9Y2D9 606 aa12.36□□□□□ -0.43
CAST-220ENST00000508117 CEMIPQ8WUJ3 1361 aa12.35□□□□□ -0.43
CAST-220ENST00000508117 GNAT3A8MTJ3 354 aa12.35□□□□□ -0.43
CAST-220ENST00000508117 DIAPH1O60610 1272 aaKnown RBP12.35□□□□□ -0.43
CAST-220ENST00000508117 EIF4G2P78344 907 aaKnown RBP eCLIP12.35□□□□□ -0.43
CAST-220ENST00000508117 GRIPAP1Q4V328 841 aa12.35□□□□□ -0.43
CAST-220ENST00000508117 AMER1Q5JTC6 1135 aaPredicted RBP12.35□□□□□ -0.43
CAST-220ENST00000508117 CC2D2BQ6DHV5 1058 aa12.35□□□□□ -0.43
CAST-220ENST00000508117 SYNE4Q8N205 404 aa12.35□□□□□ -0.43
CAST-220ENST00000508117 GAS2L2Q8NHY3 880 aa12.35□□□□□ -0.43
CAST-220ENST00000508117 JDP2Q8WYK2 163 aa12.35□□□□□ -0.43
CAST-220ENST00000508117 TSPYL2Q9H2G4 693 aaPredicted RBP12.35□□□□□ -0.43
CAST-220ENST00000508117 LTBP1Q14766 1721 aa12.34□□□□□ -0.43
CAST-220ENST00000508117 LMOD1P29536 600 aaPredicted RBP12.34□□□□□ -0.43
CAST-220ENST00000508117 HHIPL1Q96JK4 782 aa12.34□□□□□ -0.43
CAST-220ENST00000508117 TLL2Q9Y6L7 1015 aa12.34□□□□□ -0.43
CAST-220ENST00000508117 EIF6P56537 245 aaKnown RBP12.33□□□□□ -0.44
CAST-220ENST00000508117 CST9Q5W186 159 aa12.33□□□□□ -0.44
CAST-220ENST00000508117 CYP4F22Q6NT55 531 aa12.33□□□□□ -0.44
CAST-220ENST00000508117 OLFM4Q6UX06 510 aa12.33□□□□□ -0.44
CAST-220ENST00000508117 USP50Q70EL3 339 aaPredicted RBP12.33□□□□□ -0.44
CAST-220ENST00000508117 SCNN1DP51172 638 aa12.32□□□□□ -0.44
CAST-220ENST00000508117 CRY2Q49AN0 593 aa12.32□□□□□ -0.44
CAST-220ENST00000508117 USP16Q9Y5T5 823 aa12.32□□□□□ -0.44
CAST-220ENST00000508117 CASP8AP2Q9UKL3 1982 aa12.31□□□□□ -0.44
CAST-220ENST00000508117 HSPA5P11021 654 aaKnown RBP12.31□□□□□ -0.44
CAST-220ENST00000508117 PAXIP1Q6ZW49 1069 aaPredicted RBP12.31□□□□□ -0.44
CAST-220ENST00000508117 MCOLN1Q9GZU1 580 aa12.31□□□□□ -0.44
CAST-220ENST00000508117 NIP7Q9Y221 180 aaKnown RBP eCLIP12.31□□□□□ -0.44
CAST-220ENST00000508117 COL4A5P29400 1685 aa12.31□□□□□ -0.44
CAST-220ENST00000508117 TNRC18O15417 2968 aaPredicted RBP12.3□□□□□ -0.44
CAST-220ENST00000508117 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
CAST-220ENST00000508117 SNRPA1P09661 255 aaKnown RBP12.3□□□□□ -0.44
CAST-220ENST00000508117 EPS15P42566 896 aa12.3□□□□□ -0.44
CAST-220ENST00000508117 BRPF1P55201 1214 aaPredicted RBP12.3□□□□□ -0.44
CAST-220ENST00000508117 SAPCD2Q86UD0 394 aa12.3□□□□□ -0.44
CAST-220ENST00000508117 GJA3Q9Y6H8 435 aa12.3□□□□□ -0.44
CAST-220ENST00000508117 CLSPNQ9HAW4 1339 aa12.3□□□□□ -0.44
CAST-220ENST00000508117 RIC1Q4ADV7 1423 aa12.29□□□□□ -0.44
CAST-220ENST00000508117 COL3A1P02461 1466 aaPredicted RBP12.29□□□□□ -0.44
CAST-220ENST00000508117 KCNQ3O43525 872 aa12.29□□□□□ -0.44
CAST-220ENST00000508117 HOXA10P31260 410 aaPredicted RBP12.29□□□□□ -0.44
CAST-220ENST00000508117 FMR1Q06787 632 aaKnown RBP eCLIP12.29□□□□□ -0.44
CAST-220ENST00000508117 VPS33BQ9H267 617 aa12.29□□□□□ -0.44
CAST-220ENST00000508117 KIF7Q2M1P5 1343 aa12.29□□□□□ -0.44
CAST-220ENST00000508117 AOC2O75106 756 aa12.28□□□□□ -0.44
CAST-220ENST00000508117 NYXQ9GZU5 481 aa12.28□□□□□ -0.44
CAST-220ENST00000508117 ADARB2Q9NS39 739 aaKnown RBP12.28□□□□□ -0.44
CAST-220ENST00000508117 PGAP2Q9UHJ9 254 aa12.28□□□□□ -0.44
CAST-220ENST00000508117 NBPF26B4DH59 902 aa12.27□□□□□ -0.45
CAST-220ENST00000508117 TRAF5O00463 557 aa12.27□□□□□ -0.45
CAST-220ENST00000508117 GTF2E1P29083 439 aaPredicted RBP12.27□□□□□ -0.45
CAST-220ENST00000508117 PIP4K2AP48426 406 aaPredicted RBP12.27□□□□□ -0.45
CAST-220ENST00000508117 GRM1Q13255 1194 aa12.27□□□□□ -0.45
CAST-220ENST00000508117 NBPF10Q6P3W6 841 aaKnown RBP12.27□□□□□ -0.45
CAST-220ENST00000508117 LARGE2Q8N3Y3 721 aa12.27□□□□□ -0.45
CAST-220ENST00000508117 NBPF15Q8N660 670 aa12.27□□□□□ -0.45
CAST-220ENST00000508117 GPRC5DQ9NZD1 345 aa12.27□□□□□ -0.45
CAST-220ENST00000508117 TSKSQ9UJT2 592 aa12.27□□□□□ -0.45
CAST-220ENST00000508117 IBTKQ9P2D0 1353 aaPredicted RBP12.27□□□□□ -0.45
CAST-220ENST00000508117 NUP98P52948 1817 aa12.26□□□□□ -0.45
CAST-220ENST00000508117 PRAMEF22A3QJZ6 481 aa12.26□□□□□ -0.45
CAST-220ENST00000508117 PER1O15534 1290 aaPredicted RBP12.26□□□□□ -0.45
CAST-220ENST00000508117 DGKZQ13574 1117 aa12.26□□□□□ -0.45
CAST-220ENST00000508117 NIM1KQ8IY84 436 aa12.26□□□□□ -0.45
CAST-220ENST00000508117 ZC3H15Q8WU90 426 aaKnown RBP12.26□□□□□ -0.45
CAST-220ENST00000508117 CRAMP1Q96RY5 1269 aa12.26□□□□□ -0.45
CAST-220ENST00000508117 ZBTB47Q9UFB7 747 aaPredicted RBP12.26□□□□□ -0.45
CAST-220ENST00000508117 CDHR2Q9BYE9 1310 aa12.26□□□□□ -0.45
CAST-220ENST00000508117 ABCC12Q96J65 1359 aa12.26□□□□□ -0.45
CAST-220ENST00000508117 ERVV-1B6SEH8 477 aa12.25□□□□□ -0.45
CAST-220ENST00000508117 CELF2O95319 508 aaKnown RBP12.25□□□□□ -0.45
CAST-220ENST00000508117 NOGQ13253 232 aa12.25□□□□□ -0.45
CAST-220ENST00000508117 HLFQ16534 295 aa12.25□□□□□ -0.45
CAST-220ENST00000508117 CFAP44Q96MT7 982 aa12.25□□□□□ -0.45
CAST-220ENST00000508117 NPC1L1Q9UHC9 1359 aa12.25□□□□□ -0.45
CAST-220ENST00000508117 FAM177BA6PVY3 158 aa12.24□□□□□ -0.45
CAST-220ENST00000508117 U2SURPO15042 1029 aaKnown RBP12.24□□□□□ -0.45
CAST-220ENST00000508117 RPGRQ92834 1020 aaKnown RBP12.24□□□□□ -0.45
CAST-220ENST00000508117 MS4A3Q96HJ5 214 aa12.24□□□□□ -0.45
CAST-220ENST00000508117 LAMB4A4D0S4 1761 aa12.23□□□□□ -0.45
CAST-220ENST00000508117 CIAPIN1Q6FI81 312 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms