RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 TTLL7Q6ZT98 887 aa28.56■■■□□ 2.16
SNCB-204ENST00000508006 PHAXQ9H814 394 aaKnown RBP28.56■■■□□ 2.16
SNCB-204ENST00000508006 PDZRN3Q9UPQ7 1066 aa28.56■■■□□ 2.16
SNCB-204ENST00000508006 ARFGEF2Q9Y6D5 1785 aa28.55■■■□□ 2.16
SNCB-204ENST00000508006 ANKRD13DQ6ZTN6 518 aa28.55■■■□□ 2.16
SNCB-204ENST00000508006 PLBD2Q8NHP8 589 aa28.55■■■□□ 2.16
SNCB-204ENST00000508006 SSH1Q8WYL5 1049 aa28.55■■■□□ 2.16
SNCB-204ENST00000508006 ZNF219Q9P2Y4 722 aaPredicted RBP28.55■■■□□ 2.16
SNCB-204ENST00000508006 TCERG1O14776 1098 aaKnown RBP28.54■■■□□ 2.16
SNCB-204ENST00000508006 PRELPP51888 382 aa28.54■■■□□ 2.16
SNCB-204ENST00000508006 RARSP54136 660 aaKnown RBP28.54■■■□□ 2.16
SNCB-204ENST00000508006 AIMP1Q12904 312 aaKnown RBP28.54■■■□□ 2.16
SNCB-204ENST00000508006 ANKRD36CQ5JPF3 1778 aa28.54■■■□□ 2.16
SNCB-204ENST00000508006 CARMIL3Q8ND23 1372 aa28.53■■■□□ 2.16
SNCB-204ENST00000508006 DLEC1Q9Y238 1755 aa28.53■■■□□ 2.16
SNCB-204ENST00000508006 FLIIQ13045 1269 aa28.53■■■□□ 2.16
SNCB-204ENST00000508006 GIGYF2Q6Y7W6 1299 aaKnown RBP28.53■■■□□ 2.16
SNCB-204ENST00000508006 MRPL50Q8N5N7 158 aaKnown RBP28.53■■■□□ 2.16
SNCB-204ENST00000508006 BRIP1Q9BX63 1249 aa28.53■■■□□ 2.16
SNCB-204ENST00000508006 C21orf2O43822 256 aa28.52■■■□□ 2.16
SNCB-204ENST00000508006 CCDC24Q8N4L8 307 aa28.52■■■□□ 2.16
SNCB-204ENST00000508006 SMC4Q9NTJ3 1288 aa28.52■■■□□ 2.16
SNCB-204ENST00000508006 NFKBIEO00221 500 aa28.51■■■□□ 2.15
SNCB-204ENST00000508006 SETDB2Q96T68 719 aa28.51■■■□□ 2.15
SNCB-204ENST00000508006 PTPRCP08575 1304 aa28.5■■■□□ 2.15
SNCB-204ENST00000508006 HSP90AB3PQ58FF7 597 aa28.5■■■□□ 2.15
SNCB-204ENST00000508006 COL13A1Q5TAT6 717 aaPredicted RBP28.5■■■□□ 2.15
SNCB-204ENST00000508006 ZBTB3Q9H5J0 574 aa28.5■■■□□ 2.15
SNCB-204ENST00000508006 ERFEQ4G0M1 354 aa28.49■■■□□ 2.15
SNCB-204ENST00000508006 PRR5LQ6MZQ0 368 aa28.49■■■□□ 2.15
SNCB-204ENST00000508006 KSR2Q6VAB6 950 aa28.49■■■□□ 2.15
SNCB-204ENST00000508006 G2E3Q7L622 706 aa28.49■■■□□ 2.15
SNCB-204ENST00000508006 HLFQ16534 295 aa28.48■■■□□ 2.15
SNCB-204ENST00000508006 RIC3Q7Z5B4 369 aa28.48■■■□□ 2.15
SNCB-204ENST00000508006 KIF16BQ96L93 1317 aa28.47■■■□□ 2.15
SNCB-204ENST00000508006 FKBP5Q13451 457 aaPredicted RBP28.47■■■□□ 2.15
SNCB-204ENST00000508006 ST5P78524 1137 aa28.46■■■□□ 2.15
SNCB-204ENST00000508006 CNBD1Q8NA66 436 aa28.46■■■□□ 2.15
SNCB-204ENST00000508006 TCIRG1Q13488 830 aa28.45■■■□□ 2.14
SNCB-204ENST00000508006 CNKSR1Q969H4 720 aa28.45■■■□□ 2.14
SNCB-204ENST00000508006 TIAM2Q8IVF5 1701 aa28.45■■■□□ 2.14
SNCB-204ENST00000508006 PI4KAP2A4QPH2 592 aa28.44■■■□□ 2.14
SNCB-204ENST00000508006 ZNF34Q8IZ26 560 aa28.44■■■□□ 2.14
SNCB-204ENST00000508006 PI4KAP1Q8N8J0 262 aa28.44■■■□□ 2.14
SNCB-204ENST00000508006 ARHGAP45Q92619 1136 aa28.44■■■□□ 2.14
SNCB-204ENST00000508006 BCL2L13Q9BXK5 485 aa28.44■■■□□ 2.14
SNCB-204ENST00000508006 METTL22Q9BUU2 404 aaPredicted RBP28.43■■■□□ 2.14
SNCB-204ENST00000508006 TAOK3Q9H2K8 898 aa28.43■■■□□ 2.14
SNCB-204ENST00000508006 MAP3K2Q9Y2U5 619 aa28.43■■■□□ 2.14
SNCB-204ENST00000508006 PCNTO95613 3336 aa28.43■■■□□ 2.14
SNCB-204ENST00000508006 ANKRD31Q8N7Z5 1873 aa28.42■■■□□ 2.14
SNCB-204ENST00000508006 POTECB2RU33 542 aa28.42■■■□□ 2.14
SNCB-204ENST00000508006 TRIM28Q13263 835 aaKnown RBP28.42■■■□□ 2.14
SNCB-204ENST00000508006 PARP10Q53GL7 1025 aa28.42■■■□□ 2.14
SNCB-204ENST00000508006 RCAN3Q9UKA8 241 aa28.42■■■□□ 2.14
SNCB-204ENST00000508006 NIP7Q9Y221 180 aaKnown RBP eCLIP28.42■■■□□ 2.14
SNCB-204ENST00000508006 IPO8O15397 1037 aaKnown RBP28.41■■■□□ 2.14
SNCB-204ENST00000508006 NEXNQ0ZGT2 675 aa28.41■■■□□ 2.14
SNCB-204ENST00000508006 TNS4Q8IZW8 715 aa28.41■■■□□ 2.14
SNCB-204ENST00000508006 IBTKQ9P2D0 1353 aaPredicted RBP28.4■■■□□ 2.14
SNCB-204ENST00000508006 CAPN15O75808 1086 aa28.4■■■□□ 2.14
SNCB-204ENST00000508006 SOGA3Q5TF21 947 aa28.4■■■□□ 2.14
SNCB-204ENST00000508006 STYK1Q6J9G0 422 aa28.4■■■□□ 2.14
SNCB-204ENST00000508006 DNAAF4Q8WXU2 420 aa28.4■■■□□ 2.14
SNCB-204ENST00000508006 BCAR3O75815 825 aa28.39■■■□□ 2.14
SNCB-204ENST00000508006 MASTLQ96GX5 879 aa28.39■■■□□ 2.14
SNCB-204ENST00000508006 ISCA1Q9BUE6 129 aa28.39■■■□□ 2.14
SNCB-204ENST00000508006 DICER1Q9UPY3 1922 aaKnown RBP28.38■■■□□ 2.13
SNCB-204ENST00000508006 SRGNP10124 158 aa28.38■■■□□ 2.13
SNCB-204ENST00000508006 PRPF40BQ6NWY9 871 aaKnown RBP28.38■■■□□ 2.13
SNCB-204ENST00000508006 API5Q9BZZ5 524 aaKnown RBP28.38■■■□□ 2.13
SNCB-204ENST00000508006 NOB1Q9ULX3 412 aaKnown RBP28.38■■■□□ 2.13
SNCB-204ENST00000508006 FER1L6Q2WGJ9 1857 aa28.38■■■□□ 2.13
SNCB-204ENST00000508006 PPP1R42Q7Z4L9 355 aa28.37■■■□□ 2.13
SNCB-204ENST00000508006 NBPF5PQ86XG9 351 aaPredicted RBP28.37■■■□□ 2.13
SNCB-204ENST00000508006 NYXQ9GZU5 481 aa28.37■■■□□ 2.13
SNCB-204ENST00000508006 RNF123Q5XPI4 1314 aa28.37■■■□□ 2.13
SNCB-204ENST00000508006 LTBP3Q9NS15 1303 aa28.37■■■□□ 2.13
SNCB-204ENST00000508006 DDNO94850 711 aaPredicted RBP28.36■■■□□ 2.13
SNCB-204ENST00000508006 HSPA1AP0DMV8 641 aaKnown RBP28.36■■■□□ 2.13
SNCB-204ENST00000508006 HSPA1BP0DMV9 641 aaKnown RBP28.36■■■□□ 2.13
SNCB-204ENST00000508006 CCDC191Q8NCU4 936 aa28.36■■■□□ 2.13
SNCB-204ENST00000508006 CHADLQ6NUI6 762 aa28.35■■■□□ 2.13
SNCB-204ENST00000508006 TPTE2Q6XPS3 522 aa28.35■■■□□ 2.13
SNCB-204ENST00000508006 LINS1Q8NG48 757 aa28.35■■■□□ 2.13
SNCB-204ENST00000508006 MYD88Q99836 296 aa28.35■■■□□ 2.13
SNCB-204ENST00000508006 UBN2Q6ZU65 1347 aa28.35■■■□□ 2.13
SNCB-204ENST00000508006 GPTP24298 496 aa28.34■■■□□ 2.13
SNCB-204ENST00000508006 NLRP10Q86W26 655 aa28.34■■■□□ 2.13
SNCB-204ENST00000508006 COL11A2P13942 1736 aaPredicted RBP28.34■■■□□ 2.13
SNCB-204ENST00000508006 SLX4Q8IY92 1834 aa28.34■■■□□ 2.13
SNCB-204ENST00000508006 CACNA1SQ13698 1873 aa28.34■■■□□ 2.13
SNCB-204ENST00000508006 ZKSCAN2Q63HK3 967 aa28.33■■■□□ 2.13
SNCB-204ENST00000508006 F6X3S4 739 aa28.32■■■□□ 2.12
SNCB-204ENST00000508006 ATF7IPQ6VMQ6 1270 aa28.32■■■□□ 2.12
SNCB-204ENST00000508006 BEND3Q5T5X7 828 aa28.31■■■□□ 2.12
SNCB-204ENST00000508006 FRAT1Q92837 279 aaPredicted RBP28.31■■■□□ 2.12
SNCB-204ENST00000508006 UTP14AQ9BVJ6 771 aaKnown RBP28.31■■■□□ 2.12
SNCB-204ENST00000508006 IQCA1LA6NCM1 817 aa28.3■■■□□ 2.12
SNCB-204ENST00000508006 ATP5J2-PTCD1G3V325 749 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms