RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 UBE3BQ7Z3V4 1068 aa21.86■■□□□ 1.09
RNF4-209ENST00000507784 NLRP10Q86W26 655 aa21.86■■□□□ 1.09
RNF4-209ENST00000507784 STK32BQ9NY57 414 aa21.86■■□□□ 1.09
RNF4-209ENST00000507784 NIP7Q9Y221 180 aaKnown RBP eCLIP21.86■■□□□ 1.09
RNF4-209ENST00000507784 SCN7AQ01118 1682 aa21.85■■□□□ 1.09
RNF4-209ENST00000507784 H7C1W4 665 aa21.85■■□□□ 1.09
RNF4-209ENST00000507784 RPAP2Q8IXW5 612 aaPredicted RBP21.85■■□□□ 1.09
RNF4-209ENST00000507784 SUCLG2Q96I99 432 aa21.85■■□□□ 1.09
RNF4-209ENST00000507784 UTYO14607 1347 aa21.84■■□□□ 1.09
RNF4-209ENST00000507784 CEP85Q6P2H3 762 aa21.84■■□□□ 1.09
RNF4-209ENST00000507784 ANKRD44Q8N8A2 993 aa21.84■■□□□ 1.09
RNF4-209ENST00000507784 BCL2L12Q9HB09 334 aa21.84■■□□□ 1.09
RNF4-209ENST00000507784 IBTKQ9P2D0 1353 aaPredicted RBP21.84■■□□□ 1.09
RNF4-209ENST00000507784 USP42Q9H9J4 1324 aaKnown RBP21.83■■□□□ 1.09
RNF4-209ENST00000507784 EP400Q96L91 3159 aa21.83■■□□□ 1.09
RNF4-209ENST00000507784 TUBGCP6Q96RT7 1819 aa21.83■■□□□ 1.09
RNF4-209ENST00000507784 PARP10Q53GL7 1025 aa21.83■■□□□ 1.09
RNF4-209ENST00000507784 TRMT112Q9UI30 125 aaKnown RBP21.83■■□□□ 1.09
RNF4-209ENST00000507784 RGL2O15211 777 aa21.82■■□□□ 1.08
RNF4-209ENST00000507784 PCCAP05165 728 aaPredicted RBP21.82■■□□□ 1.08
RNF4-209ENST00000507784 ATP8B2P98198 1209 aa21.82■■□□□ 1.08
RNF4-209ENST00000507784 SUSD4Q5VX71 490 aa21.82■■□□□ 1.08
RNF4-209ENST00000507784 TBC1D9BQ66K14 1250 aa21.82■■□□□ 1.08
RNF4-209ENST00000507784 PPP1R42Q7Z4L9 355 aa21.82■■□□□ 1.08
RNF4-209ENST00000507784 FLAD1Q8NFF5 587 aa21.82■■□□□ 1.08
RNF4-209ENST00000507784 UBN2Q6ZU65 1347 aa21.81■■□□□ 1.08
RNF4-209ENST00000507784 HDAC1Q13547 482 aaPredicted RBP21.81■■□□□ 1.08
RNF4-209ENST00000507784 SLC15A2Q16348 729 aa21.81■■□□□ 1.08
RNF4-209ENST00000507784 CENPQQ7L2Z9 268 aaPredicted RBP21.81■■□□□ 1.08
RNF4-209ENST00000507784 ZBTB38Q8NAP3 1195 aaPredicted RBP21.81■■□□□ 1.08
RNF4-209ENST00000507784 FAM89AQ96GI7 184 aa21.81■■□□□ 1.08
RNF4-209ENST00000507784 UTP14AQ9BVJ6 771 aaKnown RBP21.81■■□□□ 1.08
RNF4-209ENST00000507784 HMMRO75330 724 aa21.8■■□□□ 1.08
RNF4-209ENST00000507784 CASP7P55210 303 aa21.8■■□□□ 1.08
RNF4-209ENST00000507784 COL23A1Q86Y22 540 aaPredicted RBP21.8■■□□□ 1.08
RNF4-209ENST00000507784 SIRT2Q8IXJ6 389 aa21.8■■□□□ 1.08
RNF4-209ENST00000507784 SETDB2Q96T68 719 aa21.8■■□□□ 1.08
RNF4-209ENST00000507784 UPF1Q92900 1129 aaKnown RBP eCLIP21.79■■□□□ 1.08
RNF4-209ENST00000507784 BICC1Q9H694 974 aaKnown RBP21.79■■□□□ 1.08
RNF4-209ENST00000507784 ANO8Q9HCE9 1232 aaPredicted RBP21.79■■□□□ 1.08
RNF4-209ENST00000507784 PNMA6EA0A0J9YXQ4 647 aa21.77■■□□□ 1.08
RNF4-209ENST00000507784 GYS1P13807 737 aa21.77■■□□□ 1.08
RNF4-209ENST00000507784 EPHA10Q5JZY3 1008 aa21.77■■□□□ 1.08
RNF4-209ENST00000507784 SYNE4Q8N205 404 aa21.77■■□□□ 1.08
RNF4-209ENST00000507784 KAZALD1Q96I82 304 aa21.77■■□□□ 1.08
RNF4-209ENST00000507784 PNPLA7Q6ZV29 1317 aa21.77■■□□□ 1.07
RNF4-209ENST00000507784 KDM2BQ8NHM5 1336 aa21.77■■□□□ 1.07
RNF4-209ENST00000507784 IRS4O14654 1257 aaPredicted RBP21.76■■□□□ 1.07
RNF4-209ENST00000507784 SRGAP3O43295 1099 aa21.76■■□□□ 1.07
RNF4-209ENST00000507784 GTF2E1P29083 439 aaPredicted RBP21.76■■□□□ 1.07
RNF4-209ENST00000507784 CHMP3Q9Y3E7 222 aa21.76■■□□□ 1.07
RNF4-209ENST00000507784 SH3TC1Q8TE82 1336 aa21.76■■□□□ 1.07
RNF4-209ENST00000507784 CDHR2Q9BYE9 1310 aa21.76■■□□□ 1.07
RNF4-209ENST00000507784 NPHP1O15259 732 aa21.75■■□□□ 1.07
RNF4-209ENST00000507784 NTSR2O95665 410 aa21.75■■□□□ 1.07
RNF4-209ENST00000507784 FOXO4P98177 505 aa21.74■■□□□ 1.07
RNF4-209ENST00000507784 NFIXQ14938 502 aa21.74■■□□□ 1.07
RNF4-209ENST00000507784 LMBR1LQ6UX01 489 aa21.74■■□□□ 1.07
RNF4-209ENST00000507784 NBPF5PQ86XG9 351 aaPredicted RBP21.74■■□□□ 1.07
RNF4-209ENST00000507784 NUTM1Q86Y26 1132 aa21.74■■□□□ 1.07
RNF4-209ENST00000507784 NYXQ9GZU5 481 aa21.74■■□□□ 1.07
RNF4-209ENST00000507784 SSH3Q8TE77 659 aa21.73■■□□□ 1.07
RNF4-209ENST00000507784 QSER1Q2KHR3 1735 aa21.72■■□□□ 1.07
RNF4-209ENST00000507784 PDE8AO60658 829 aa21.72■■□□□ 1.07
RNF4-209ENST00000507784 HCLS1P14317 486 aaPredicted RBP21.72■■□□□ 1.07
RNF4-209ENST00000507784 MTX1Q13505 466 aa21.72■■□□□ 1.07
RNF4-209ENST00000507784 ERFEQ4G0M1 354 aa21.72■■□□□ 1.07
RNF4-209ENST00000507784 TPTE2Q6XPS3 522 aa21.72■■□□□ 1.07
RNF4-209ENST00000507784 NLGN1Q8N2Q7 840 aa21.72■■□□□ 1.07
RNF4-209ENST00000507784 GCC1Q96CN9 775 aa21.72■■□□□ 1.07
RNF4-209ENST00000507784 DCTPP1Q9H773 170 aa21.72■■□□□ 1.07
RNF4-209ENST00000507784 HSP90B1P14625 803 aaKnown RBP21.71■■□□□ 1.07
RNF4-209ENST00000507784 POLA2Q14181 598 aa21.71■■□□□ 1.07
RNF4-209ENST00000507784 CCDC85AQ96PX6 553 aaPredicted RBP21.71■■□□□ 1.07
RNF4-209ENST00000507784 PLA2G12BQ9BX93 195 aa21.71■■□□□ 1.07
RNF4-209ENST00000507784 MYH3P11055 1940 aa21.7■■□□□ 1.07
RNF4-209ENST00000507784 COL24A1Q17RW2 1714 aa21.7■■□□□ 1.06
RNF4-209ENST00000507784 APBB1O00213 710 aa21.7■■□□□ 1.06
RNF4-209ENST00000507784 TM4SF1P30408 202 aa21.7■■□□□ 1.06
RNF4-209ENST00000507784 RABL6Q3YEC7 729 aaPredicted RBP21.7■■□□□ 1.06
RNF4-209ENST00000507784 SMC5Q8IY18 1101 aa21.7■■□□□ 1.06
RNF4-209ENST00000507784 CARMIL3Q8ND23 1372 aa21.7■■□□□ 1.06
RNF4-209ENST00000507784 SURF6O75683 361 aaKnown RBP21.69■■□□□ 1.06
RNF4-209ENST00000507784 ANKRD45Q5TZF3 282 aa21.69■■□□□ 1.06
RNF4-209ENST00000507784 MSL1Q68DK7 614 aa21.69■■□□□ 1.06
RNF4-209ENST00000507784 BCL11AQ9H165 835 aa21.69■■□□□ 1.06
RNF4-209ENST00000507784 ZBTB47Q9UFB7 747 aaPredicted RBP21.69■■□□□ 1.06
RNF4-209ENST00000507784 PDZRN3Q9UPQ7 1066 aa21.69■■□□□ 1.06
RNF4-209ENST00000507784 EXOC6BQ9Y2D4 811 aa21.69■■□□□ 1.06
RNF4-209ENST00000507784 SERPINB2P05120 415 aa21.68■■□□□ 1.06
RNF4-209ENST00000507784 CTSWP56202 376 aa21.68■■□□□ 1.06
RNF4-209ENST00000507784 ILDR2Q71H61 639 aa21.68■■□□□ 1.06
RNF4-209ENST00000507784 CCDC24Q8N4L8 307 aa21.68■■□□□ 1.06
RNF4-209ENST00000507784 DDX60Q8IY21 1712 aaKnown RBP21.68■■□□□ 1.06
RNF4-209ENST00000507784 OS9Q13438 667 aaPredicted RBP21.67■■□□□ 1.06
RNF4-209ENST00000507784 PA2G4Q9UQ80 394 aaKnown RBP21.67■■□□□ 1.06
RNF4-209ENST00000507784 LAMB2P55268 1798 aa21.66■■□□□ 1.06
RNF4-209ENST00000507784 CSF1RP07333 972 aa21.66■■□□□ 1.06
RNF4-209ENST00000507784 CCDC57Q2TAC2 916 aa21.66■■□□□ 1.06
RNF4-209ENST00000507784 CNBD1Q8NA66 436 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms