RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 DLEC1Q9Y238 1755 aa20.06■□□□□ 0.8
COL1A1-211ENST00000507689 KLRG2A4D1S0 409 aaPredicted RBP20.05■□□□□ 0.8
COL1A1-211ENST00000507689 HSP90B1P14625 803 aaKnown RBP20.05■□□□□ 0.8
COL1A1-211ENST00000507689 C9orf131Q5VYM1 1079 aa20.05■□□□□ 0.8
COL1A1-211ENST00000507689 RNF181Q9P0P0 153 aa20.05■□□□□ 0.8
COL1A1-211ENST00000507689 ANKRD31Q8N7Z5 1873 aa20.05■□□□□ 0.8
COL1A1-211ENST00000507689 SH3TC1Q8TE82 1336 aa20.04■□□□□ 0.8
COL1A1-211ENST00000507689 NEXNQ0ZGT2 675 aa20.04■□□□□ 0.8
COL1A1-211ENST00000507689 PHAXQ9H814 394 aaKnown RBP20.04■□□□□ 0.8
COL1A1-211ENST00000507689 SLC4A2P04920 1241 aa20.03■□□□□ 0.8
COL1A1-211ENST00000507689 LMNB1P20700 586 aa20.03■□□□□ 0.8
COL1A1-211ENST00000507689 EXOSC9Q06265 439 aaKnown RBP20.03■□□□□ 0.8
COL1A1-211ENST00000507689 ZNF526Q8TF50 670 aaPredicted RBP20.03■□□□□ 0.8
COL1A1-211ENST00000507689 RIC1Q4ADV7 1423 aa20.02■□□□□ 0.8
COL1A1-211ENST00000507689 ATP5J2-PTCD1G3V325 749 aa20.02■□□□□ 0.8
COL1A1-211ENST00000507689 CCDC93Q567U6 631 aa20.02■□□□□ 0.8
COL1A1-211ENST00000507689 ABCC12Q96J65 1359 aa20.02■□□□□ 0.8
COL1A1-211ENST00000507689 TCERG1O14776 1098 aaKnown RBP20.01■□□□□ 0.79
COL1A1-211ENST00000507689 CRY2Q49AN0 593 aa20.01■□□□□ 0.79
COL1A1-211ENST00000507689 SLC10A5Q5PT55 438 aa20.01■□□□□ 0.79
COL1A1-211ENST00000507689 MYD88Q99836 296 aa20.01■□□□□ 0.79
COL1A1-211ENST00000507689 TAOK3Q9H2K8 898 aa20.01■□□□□ 0.79
COL1A1-211ENST00000507689 COL11A2P13942 1736 aaPredicted RBP20■□□□□ 0.79
COL1A1-211ENST00000507689 E9PSI1 815 aa20■□□□□ 0.79
COL1A1-211ENST00000507689 RASSF7Q02833 373 aa20■□□□□ 0.79
COL1A1-211ENST00000507689 KSR2Q6VAB6 950 aa20■□□□□ 0.79
COL1A1-211ENST00000507689 RTKN2Q8IZC4 609 aa20■□□□□ 0.79
COL1A1-211ENST00000507689 ISCA1Q9BUE6 129 aa20■□□□□ 0.79
COL1A1-211ENST00000507689 ANKRD36CQ5JPF3 1778 aa20■□□□□ 0.79
COL1A1-211ENST00000507689 TRIM28Q13263 835 aaKnown RBP19.99■□□□□ 0.79
COL1A1-211ENST00000507689 GRIPAP1Q4V328 841 aa19.99■□□□□ 0.79
COL1A1-211ENST00000507689 CC2D2BQ6DHV5 1058 aa19.99■□□□□ 0.79
COL1A1-211ENST00000507689 DDX46Q7L014 1031 aaKnown RBP19.99■□□□□ 0.79
COL1A1-211ENST00000507689 CRAMP1Q96RY5 1269 aa19.99■□□□□ 0.79
COL1A1-211ENST00000507689 MAP3K2Q9Y2U5 619 aa19.99■□□□□ 0.79
COL1A1-211ENST00000507689 KDM2BQ8NHM5 1336 aa19.99■□□□□ 0.79
COL1A1-211ENST00000507689 ADCY9O60503 1353 aa19.98■□□□□ 0.79
COL1A1-211ENST00000507689 VAMP4O75379 141 aa19.98■□□□□ 0.79
COL1A1-211ENST00000507689 HCLS1P14317 486 aaPredicted RBP19.98■□□□□ 0.79
COL1A1-211ENST00000507689 HOXA10P31260 410 aaPredicted RBP19.98■□□□□ 0.79
COL1A1-211ENST00000507689 FKBP5Q13451 457 aaPredicted RBP19.98■□□□□ 0.79
COL1A1-211ENST00000507689 CCDC191Q8NCU4 936 aa19.98■□□□□ 0.79
COL1A1-211ENST00000507689 METTL22Q9BUU2 404 aaPredicted RBP19.98■□□□□ 0.79
COL1A1-211ENST00000507689 CWC25Q9NXE8 425 aaPredicted RBP19.98■□□□□ 0.79
COL1A1-211ENST00000507689 ZC3H4Q9UPT8 1303 aaKnown RBP19.98■□□□□ 0.79
COL1A1-211ENST00000507689 PI4KAP2A4QPH2 592 aa19.97■□□□□ 0.79
COL1A1-211ENST00000507689 PI4KAP1Q8N8J0 262 aa19.97■□□□□ 0.79
COL1A1-211ENST00000507689 FAM89AQ96GI7 184 aa19.97■□□□□ 0.79
COL1A1-211ENST00000507689 PPEF1O14829 653 aaPredicted RBP19.96■□□□□ 0.79
COL1A1-211ENST00000507689 FLIIQ13045 1269 aa19.96■□□□□ 0.79
COL1A1-211ENST00000507689 ZNF428Q96B54 188 aa19.96■□□□□ 0.79
COL1A1-211ENST00000507689 LTBP3Q9NS15 1303 aa19.96■□□□□ 0.79
COL1A1-211ENST00000507689 GOLGB1Q14789 3259 aaKnown RBP19.95■□□□□ 0.78
COL1A1-211ENST00000507689 NFKBIEO00221 500 aa19.95■□□□□ 0.78
COL1A1-211ENST00000507689 IRS4O14654 1257 aaPredicted RBP19.95■□□□□ 0.78
COL1A1-211ENST00000507689 RTL5Q5HYW3 569 aaPredicted RBP19.95■□□□□ 0.78
COL1A1-211ENST00000507689 DPY19L2Q6NUT2 758 aa19.95■□□□□ 0.78
COL1A1-211ENST00000507689 ZBTB38Q8NAP3 1195 aaPredicted RBP19.95■□□□□ 0.78
COL1A1-211ENST00000507689 SPINK5Q9NQ38 1064 aaPredicted RBP19.95■□□□□ 0.78
COL1A1-211ENST00000507689 ARFGEF2Q9Y6D5 1785 aa19.94■□□□□ 0.78
COL1A1-211ENST00000507689 BBOX1O75936 387 aa19.94■□□□□ 0.78
COL1A1-211ENST00000507689 FKBP4Q02790 459 aaKnown RBP eCLIP19.94■□□□□ 0.78
COL1A1-211ENST00000507689 MIER1Q8N108 512 aa19.94■□□□□ 0.78
COL1A1-211ENST00000507689 ZNF521Q96K83 1311 aa19.94■□□□□ 0.78
COL1A1-211ENST00000507689 CACNA1SQ13698 1873 aa19.94■□□□□ 0.78
COL1A1-211ENST00000507689 TNRC6CQ9HCJ0 1690 aaKnown RBP19.94■□□□□ 0.78
COL1A1-211ENST00000507689 SLX4Q8IY92 1834 aa19.93■□□□□ 0.78
COL1A1-211ENST00000507689 UTRNP46939 3433 aa19.93■□□□□ 0.78
COL1A1-211ENST00000507689 C16orf71Q8IYS4 520 aaPredicted RBP19.93■□□□□ 0.78
COL1A1-211ENST00000507689 PCCAP05165 728 aaPredicted RBP19.92■□□□□ 0.78
COL1A1-211ENST00000507689 TMC4Q7Z404 712 aa19.92■□□□□ 0.78
COL1A1-211ENST00000507689 SYNE4Q8N205 404 aa19.92■□□□□ 0.78
COL1A1-211ENST00000507689 C7orf43Q8WVR3 580 aa19.92■□□□□ 0.78
COL1A1-211ENST00000507689 C3orf67Q6ZVT6 689 aa19.91■□□□□ 0.78
COL1A1-211ENST00000507689 G2E3Q7L622 706 aa19.91■□□□□ 0.78
COL1A1-211ENST00000507689 DNAAF4Q8WXU2 420 aa19.91■□□□□ 0.78
COL1A1-211ENST00000507689 SLFN5Q08AF3 891 aa19.9■□□□□ 0.78
COL1A1-211ENST00000507689 GRAPQ13588 217 aa19.9■□□□□ 0.78
COL1A1-211ENST00000507689 CCDC152Q4G0S7 254 aa19.9■□□□□ 0.78
COL1A1-211ENST00000507689 GRAPLQ8TC17 118 aaPredicted RBP19.9■□□□□ 0.78
COL1A1-211ENST00000507689 JDP2Q8WYK2 163 aa19.9■□□□□ 0.78
COL1A1-211ENST00000507689 ABCC4O15439 1325 aa19.9■□□□□ 0.78
COL1A1-211ENST00000507689 PDE8AO60658 829 aa19.89■□□□□ 0.77
COL1A1-211ENST00000507689 SF3B3Q15393 1217 aaKnown RBP19.89■□□□□ 0.77
COL1A1-211ENST00000507689 SUPT20HQ8NEM7 779 aa19.89■□□□□ 0.77
COL1A1-211ENST00000507689 PSMD1Q99460 953 aa19.89■□□□□ 0.77
COL1A1-211ENST00000507689 ATP6V0A2Q9Y487 856 aa19.89■□□□□ 0.77
COL1A1-211ENST00000507689 ZNF277Q9NRM2 450 aaPredicted RBP19.88■□□□□ 0.77
COL1A1-211ENST00000507689 GLTPD2A6NH11 291 aa19.87■□□□□ 0.77
COL1A1-211ENST00000507689 NEURL1BA8MQ27 555 aa19.87■□□□□ 0.77
COL1A1-211ENST00000507689 IARSP41252 1262 aaKnown RBP19.87■□□□□ 0.77
COL1A1-211ENST00000507689 C1QTNF8P60827 252 aa19.87■□□□□ 0.77
COL1A1-211ENST00000507689 CWF19L2Q2TBE0 894 aaKnown RBP19.87■□□□□ 0.77
COL1A1-211ENST00000507689 OLFM4Q6UX06 510 aa19.87■□□□□ 0.77
COL1A1-211ENST00000507689 DPP8Q6V1X1 898 aaPredicted RBP19.87■□□□□ 0.77
COL1A1-211ENST00000507689 SP8Q8IXZ3 490 aa19.87■□□□□ 0.77
COL1A1-211ENST00000507689 LINS1Q8NG48 757 aa19.87■□□□□ 0.77
COL1A1-211ENST00000507689 CACNA1FO60840 1977 aa19.86■□□□□ 0.77
COL1A1-211ENST00000507689 SBF1O95248 1867 aa19.86■□□□□ 0.77
COL1A1-211ENST00000507689 FER1L6Q2WGJ9 1857 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms