RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.03□□□□□ -1.44
LSM6-205ENST00000507449 TMC7Q7Z402 723 aa6.03□□□□□ -1.44
LSM6-205ENST00000507449 CRISPLD1Q9H336 500 aa6.03□□□□□ -1.44
LSM6-205ENST00000507449 GPAMQ9HCL2 828 aa6.03□□□□□ -1.44
LSM6-205ENST00000507449 ENAMQ9NRM1 1142 aa6.03□□□□□ -1.44
LSM6-205ENST00000507449 DYRK1BQ9Y463 629 aa6.03□□□□□ -1.44
LSM6-205ENST00000507449 GPC6Q9Y625 555 aaPredicted RBP6.03□□□□□ -1.44
LSM6-205ENST00000507449 A0A1W2PNR3 127 aa6.02□□□□□ -1.45
LSM6-205ENST00000507449 OPLAHO14841 1288 aa6.02□□□□□ -1.45
LSM6-205ENST00000507449 MICAL2O94851 1124 aa6.02□□□□□ -1.45
LSM6-205ENST00000507449 PDGFAP04085 211 aa6.02□□□□□ -1.45
LSM6-205ENST00000507449 PLA2G4EQ3MJ16 856 aa6.02□□□□□ -1.45
LSM6-205ENST00000507449 IER5Q5VY09 327 aa6.02□□□□□ -1.45
LSM6-205ENST00000507449 ALKBH2Q6NS38 261 aa6.02□□□□□ -1.45
LSM6-205ENST00000507449 LRRC69Q6ZNQ3 347 aa6.02□□□□□ -1.45
LSM6-205ENST00000507449 RGL4Q8IZJ4 473 aa6.02□□□□□ -1.45
LSM6-205ENST00000507449 RUBCNLQ9H714 662 aa6.02□□□□□ -1.45
LSM6-205ENST00000507449 BRPF3Q9ULD4 1205 aa6.02□□□□□ -1.45
LSM6-205ENST00000507449 POLIQ9UNA4 740 aa6.02□□□□□ -1.45
LSM6-205ENST00000507449 SLC35F4A4IF30 521 aa6.01□□□□□ -1.45
LSM6-205ENST00000507449 NDUFB5O43674 189 aa6.01□□□□□ -1.45
LSM6-205ENST00000507449 F11P03951 625 aa6.01□□□□□ -1.45
LSM6-205ENST00000507449 INPP5BP32019 993 aa6.01□□□□□ -1.45
LSM6-205ENST00000507449 IDH3AP50213 366 aa6.01□□□□□ -1.45
LSM6-205ENST00000507449 PTSQ03393 145 aa6.01□□□□□ -1.45
LSM6-205ENST00000507449 ARSJQ5FYB0 599 aaPredicted RBP6.01□□□□□ -1.45
LSM6-205ENST00000507449 BICDL1Q6ZP65 573 aa6.01□□□□□ -1.45
LSM6-205ENST00000507449 NPM2Q86SE8 214 aaKnown RBP6.01□□□□□ -1.45
LSM6-205ENST00000507449 GJD3Q8N144 294 aa6.01□□□□□ -1.45
LSM6-205ENST00000507449 EDEM1Q92611 657 aa6.01□□□□□ -1.45
LSM6-205ENST00000507449 FAM129BQ96TA1 746 aa6.01□□□□□ -1.45
LSM6-205ENST00000507449 CUEDC1Q9NWM3 386 aaPredicted RBP6.01□□□□□ -1.45
LSM6-205ENST00000507449 AMOTL2Q9Y2J4 779 aa6.01□□□□□ -1.45
LSM6-205ENST00000507449 USP20Q9Y2K6 914 aa6.01□□□□□ -1.45
LSM6-205ENST00000507449 GPR182O15218 404 aa6□□□□□ -1.45
LSM6-205ENST00000507449 ERCC3P19447 782 aa6□□□□□ -1.45
LSM6-205ENST00000507449 MZF1P28698 734 aaPredicted RBP6□□□□□ -1.45
LSM6-205ENST00000507449 DNM1Q05193 864 aaKnown RBP6□□□□□ -1.45
LSM6-205ENST00000507449 TYRO3Q06418 890 aa6□□□□□ -1.45
LSM6-205ENST00000507449 UBAP2LQ14157 1087 aaKnown RBP6□□□□□ -1.45
LSM6-205ENST00000507449 DSC3Q14574 896 aa6□□□□□ -1.45
LSM6-205ENST00000507449 PODNQ7Z5L7 613 aa6□□□□□ -1.45
LSM6-205ENST00000507449 BTLAQ7Z6A9 289 aa6□□□□□ -1.45
LSM6-205ENST00000507449 FBXO33Q7Z6M2 555 aa6□□□□□ -1.45
LSM6-205ENST00000507449 GPR152Q8TDT2 470 aa6□□□□□ -1.45
LSM6-205ENST00000507449 GAS2L1Q99501 681 aaPredicted RBP6□□□□□ -1.45
LSM6-205ENST00000507449 HCN2Q9UL51 889 aa6□□□□□ -1.45
LSM6-205ENST00000507449 RBM47A0AV96 593 aaKnown RBP5.99□□□□□ -1.45
LSM6-205ENST00000507449 UNCXA6NJT0 531 aa5.99□□□□□ -1.45
LSM6-205ENST00000507449 TREHO43280 583 aa5.99□□□□□ -1.45
LSM6-205ENST00000507449 TAGLNQ01995 201 aaKnown RBP5.99□□□□□ -1.45
LSM6-205ENST00000507449 AAMPQ13685 434 aa5.99□□□□□ -1.45
LSM6-205ENST00000507449 HIF1AQ16665 826 aa5.99□□□□□ -1.45
LSM6-205ENST00000507449 NUDT16Q96DE0 195 aaKnown RBP5.99□□□□□ -1.45
LSM6-205ENST00000507449 CITED4Q96RK1 184 aa5.99□□□□□ -1.45
LSM6-205ENST00000507449 COL25A1Q9BXS0 654 aaPredicted RBP5.99□□□□□ -1.45
LSM6-205ENST00000507449 GGNBP2Q9H3C7 697 aa5.99□□□□□ -1.45
LSM6-205ENST00000507449 A6NHS1 94 aa5.98□□□□□ -1.45
LSM6-205ENST00000507449 ARHGEF15O94989 841 aa5.98□□□□□ -1.45
LSM6-205ENST00000507449 P4HBP07237 508 aaKnown RBP5.98□□□□□ -1.45
LSM6-205ENST00000507449 FMR1Q06787 632 aaKnown RBP eCLIP5.98□□□□□ -1.45
LSM6-205ENST00000507449 TRIP4Q15650 581 aaPredicted RBP5.98□□□□□ -1.45
LSM6-205ENST00000507449 ZSCAN29Q8IWY8 852 aaPredicted RBP5.98□□□□□ -1.45
LSM6-205ENST00000507449 ANKIB1Q9P2G1 1089 aa5.98□□□□□ -1.45
LSM6-205ENST00000507449 KCNMB2Q9Y691 235 aa5.98□□□□□ -1.45
LSM6-205ENST00000507449 SLURP2P0DP57 97 aa5.97□□□□□ -1.45
LSM6-205ENST00000507449 ZNF16P17020 682 aaPredicted RBP5.97□□□□□ -1.45
LSM6-205ENST00000507449 RBM25P49756 843 aaKnown RBP5.97□□□□□ -1.45
LSM6-205ENST00000507449 ARSDP51689 593 aa5.97□□□□□ -1.45
LSM6-205ENST00000507449 DBN1Q16643 649 aa5.97□□□□□ -1.45
LSM6-205ENST00000507449 SAMD5Q5TGI4 173 aa5.97□□□□□ -1.45
LSM6-205ENST00000507449 NLRP8Q86W28 1048 aa5.97□□□□□ -1.45
LSM6-205ENST00000507449 CCDC155Q8N6L0 562 aa5.97□□□□□ -1.45
LSM6-205ENST00000507449 ALKBH8Q96BT7 664 aaKnown RBP5.97□□□□□ -1.45
LSM6-205ENST00000507449 BCL2L13Q9BXK5 485 aa5.97□□□□□ -1.45
LSM6-205ENST00000507449 ZCCHC2Q9C0B9 1178 aaKnown RBP5.97□□□□□ -1.45
LSM6-205ENST00000507449 RTCBQ9Y3I0 505 aaKnown RBP5.97□□□□□ -1.45
LSM6-205ENST00000507449 KRT76Q01546 638 aa5.96□□□□□ -1.46
LSM6-205ENST00000507449 COL19A1Q14993 1142 aa5.96□□□□□ -1.46
LSM6-205ENST00000507449 PGBD3Q8N328 593 aa5.96□□□□□ -1.46
LSM6-205ENST00000507449 BEND7Q8N7W2 519 aaPredicted RBP5.96□□□□□ -1.46
LSM6-205ENST00000507449 DCAF5Q96JK2 942 aa5.96□□□□□ -1.46
LSM6-205ENST00000507449 DMRTB1Q96MA1 342 aa5.96□□□□□ -1.46
LSM6-205ENST00000507449 NDFIP2Q9NV92 336 aa5.96□□□□□ -1.46
LSM6-205ENST00000507449 EFSO43281 561 aa5.95□□□□□ -1.46
LSM6-205ENST00000507449 USP5P45974 858 aa5.95□□□□□ -1.46
LSM6-205ENST00000507449 EHHADHQ08426 723 aa5.95□□□□□ -1.46
LSM6-205ENST00000507449 PDE3BQ13370 1112 aa5.95□□□□□ -1.46
LSM6-205ENST00000507449 LBRQ14739 615 aaKnown RBP5.95□□□□□ -1.46
LSM6-205ENST00000507449 GRIN2CQ14957 1233 aa5.95□□□□□ -1.46
LSM6-205ENST00000507449 RIPOR1Q6ZS17 1223 aa5.95□□□□□ -1.46
LSM6-205ENST00000507449 TMC1Q8TDI8 760 aa5.95□□□□□ -1.46
LSM6-205ENST00000507449 GIPC2Q8TF65 315 aa5.95□□□□□ -1.46
LSM6-205ENST00000507449 PIK3R5Q8WYR1 880 aa5.95□□□□□ -1.46
LSM6-205ENST00000507449 CEP63Q96MT8 703 aa5.95□□□□□ -1.46
LSM6-205ENST00000507449 SETDB2Q96T68 719 aa5.95□□□□□ -1.46
LSM6-205ENST00000507449 NEUROD4Q9HD90 331 aa5.95□□□□□ -1.46
LSM6-205ENST00000507449 STRN4Q9NRL3 753 aa5.95□□□□□ -1.46
LSM6-205ENST00000507449 FAM157BP0CG42 384 aa5.94□□□□□ -1.46
LSM6-205ENST00000507449 ITGA6P23229 1130 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms