RNA–Protein interactions for RNA: ENST00000507282.1

LPCAT1-204, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 417 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-204ENST00000507282 TNRC6CQ9HCJ0 1690 aaKnown RBP22.11■■□□□ 1.13
LPCAT1-204ENST00000507282 CCDC27Q2M243 656 aa22.1■■□□□ 1.13
LPCAT1-204ENST00000507282 C7orf43Q8WVR3 580 aa22.1■■□□□ 1.13
LPCAT1-204ENST00000507282 ELL2O00472 640 aaPredicted RBP22.09■■□□□ 1.13
LPCAT1-204ENST00000507282 TCIRG1Q13488 830 aa22.09■■□□□ 1.13
LPCAT1-204ENST00000507282 PLBD2Q8NHP8 589 aa22.09■■□□□ 1.13
LPCAT1-204ENST00000507282 RNF123Q5XPI4 1314 aa22.08■■□□□ 1.13
LPCAT1-204ENST00000507282 ANKRD36CQ5JPF3 1778 aa22.08■■□□□ 1.13
LPCAT1-204ENST00000507282 TOMM70O94826 608 aa22.08■■□□□ 1.13
LPCAT1-204ENST00000507282 ANKRD13DQ6ZTN6 518 aa22.08■■□□□ 1.13
LPCAT1-204ENST00000507282 C16orf71Q8IYS4 520 aaPredicted RBP22.08■■□□□ 1.13
LPCAT1-204ENST00000507282 CHMP4AQ9BY43 222 aa22.08■■□□□ 1.13
LPCAT1-204ENST00000507282 TIAM2Q8IVF5 1701 aa22.08■■□□□ 1.12
LPCAT1-204ENST00000507282 NLRP10Q86W26 655 aa22.07■■□□□ 1.12
LPCAT1-204ENST00000507282 WWC1Q8IX03 1113 aa22.07■■□□□ 1.12
LPCAT1-204ENST00000507282 RTKN2Q8IZC4 609 aa22.07■■□□□ 1.12
LPCAT1-204ENST00000507282 NLRP3Q96P20 1036 aa22.07■■□□□ 1.12
LPCAT1-204ENST00000507282 GLTPD2A6NH11 291 aa22.06■■□□□ 1.12
LPCAT1-204ENST00000507282 HOXA10P31260 410 aaPredicted RBP22.06■■□□□ 1.12
LPCAT1-204ENST00000507282 DPY19L2Q6NUT2 758 aa22.06■■□□□ 1.12
LPCAT1-204ENST00000507282 C8orf58Q8NAV2 365 aa22.06■■□□□ 1.12
LPCAT1-204ENST00000507282 RBM17Q96I25 401 aaKnown RBP22.06■■□□□ 1.12
LPCAT1-204ENST00000507282 RRAGCQ9HB90 399 aa22.06■■□□□ 1.12
LPCAT1-204ENST00000507282 NCBP3Q53F19 620 aaKnown RBP22.05■■□□□ 1.12
LPCAT1-204ENST00000507282 SLC10A5Q5PT55 438 aa22.05■■□□□ 1.12
LPCAT1-204ENST00000507282 TRMT112Q9UI30 125 aaKnown RBP22.05■■□□□ 1.12
LPCAT1-204ENST00000507282 DICER1Q9UPY3 1922 aaKnown RBP22.04■■□□□ 1.12
LPCAT1-204ENST00000507282 FKBP4Q02790 459 aaKnown RBP eCLIP22.04■■□□□ 1.12
LPCAT1-204ENST00000507282 CRAMP1Q96RY5 1269 aa22.04■■□□□ 1.12
LPCAT1-204ENST00000507282 GOLGA2Q08379 1002 aa22.03■■□□□ 1.12
LPCAT1-204ENST00000507282 CCDC30Q5VVM6 783 aa22.03■■□□□ 1.12
LPCAT1-204ENST00000507282 CC2D2BQ6DHV5 1058 aa22.03■■□□□ 1.12
LPCAT1-204ENST00000507282 OLFM4Q6UX06 510 aa22.03■■□□□ 1.12
LPCAT1-204ENST00000507282 TSR2Q969E8 191 aaKnown RBP22.03■■□□□ 1.12
LPCAT1-204ENST00000507282 IL16Q14005 1332 aa22.03■■□□□ 1.12
LPCAT1-204ENST00000507282 SH3TC1Q8TE82 1336 aa22.03■■□□□ 1.12
LPCAT1-204ENST00000507282 C3orf67Q6ZVT6 689 aa22.02■■□□□ 1.12
LPCAT1-204ENST00000507282 RIC3Q7Z5B4 369 aa22.02■■□□□ 1.12
LPCAT1-204ENST00000507282 HSPA6P17066 643 aa22.01■■□□□ 1.11
LPCAT1-204ENST00000507282 RBM46Q8TBY0 533 aaKnown RBP22.01■■□□□ 1.11
LPCAT1-204ENST00000507282 ATP5J2-PTCD1G3V325 749 aa22■■□□□ 1.11
LPCAT1-204ENST00000507282 HCLS1P14317 486 aaPredicted RBP22■■□□□ 1.11
LPCAT1-204ENST00000507282 VEGFAP15692 232 aaPredicted RBP22■■□□□ 1.11
LPCAT1-204ENST00000507282 GRIPAP1Q4V328 841 aa22■■□□□ 1.11
LPCAT1-204ENST00000507282 FAM9BQ8IZU0 186 aa22■■□□□ 1.11
LPCAT1-204ENST00000507282 TSPYL6Q8N831 410 aa22■■□□□ 1.11
LPCAT1-204ENST00000507282 ISCA1Q9BUE6 129 aa22■■□□□ 1.11
LPCAT1-204ENST00000507282 TMX4Q9H1E5 349 aaPredicted RBP22■■□□□ 1.11
LPCAT1-204ENST00000507282 PHAXQ9H814 394 aaKnown RBP22■■□□□ 1.11
LPCAT1-204ENST00000507282 ZNF277Q9NRM2 450 aaPredicted RBP22■■□□□ 1.11
LPCAT1-204ENST00000507282 SALL2Q9Y467 1007 aaPredicted RBP22■■□□□ 1.11
LPCAT1-204ENST00000507282 PPEF1O14829 653 aaPredicted RBP21.99■■□□□ 1.11
LPCAT1-204ENST00000507282 SYNE4Q8N205 404 aa21.99■■□□□ 1.11
LPCAT1-204ENST00000507282 DDX58O95786 925 aaKnown RBP21.98■■□□□ 1.11
LPCAT1-204ENST00000507282 ZNF428Q96B54 188 aa21.98■■□□□ 1.11
LPCAT1-204ENST00000507282 PSMD1Q99460 953 aa21.98■■□□□ 1.11
LPCAT1-204ENST00000507282 TCERG1O14776 1098 aaKnown RBP21.97■■□□□ 1.11
LPCAT1-204ENST00000507282 TRIM28Q13263 835 aaKnown RBP21.97■■□□□ 1.11
LPCAT1-204ENST00000507282 WDR63Q8IWG1 891 aa21.97■■□□□ 1.11
LPCAT1-204ENST00000507282 STK31Q9BXU1 1019 aa21.97■■□□□ 1.11
LPCAT1-204ENST00000507282 IARSP41252 1262 aaKnown RBP21.96■■□□□ 1.11
LPCAT1-204ENST00000507282 TWISTNBQ3B726 338 aaPredicted RBP21.96■■□□□ 1.11
LPCAT1-204ENST00000507282 DDX46Q7L014 1031 aaKnown RBP21.96■■□□□ 1.11
LPCAT1-204ENST00000507282 FAM89AQ96GI7 184 aa21.96■■□□□ 1.11
LPCAT1-204ENST00000507282 ABCC4O15439 1325 aa21.96■■□□□ 1.11
LPCAT1-204ENST00000507282 FSTL1Q12841 308 aa21.95■■□□□ 1.1
LPCAT1-204ENST00000507282 WDR90Q96KV7 1748 aa21.94■■□□□ 1.1
LPCAT1-204ENST00000507282 LAMB2P55268 1798 aa21.94■■□□□ 1.1
LPCAT1-204ENST00000507282 BBOX1O75936 387 aa21.94■■□□□ 1.1
LPCAT1-204ENST00000507282 DDNO94850 711 aaPredicted RBP21.94■■□□□ 1.1
LPCAT1-204ENST00000507282 JDP2Q8WYK2 163 aa21.94■■□□□ 1.1
LPCAT1-204ENST00000507282 MYD88Q99836 296 aa21.94■■□□□ 1.1
LPCAT1-204ENST00000507282 ATP6V0A2Q9Y487 856 aa21.94■■□□□ 1.1
LPCAT1-204ENST00000507282 SNED1Q8TER0 1413 aa21.94■■□□□ 1.1
LPCAT1-204ENST00000507282 RTL5Q5HYW3 569 aaPredicted RBP21.93■■□□□ 1.1
LPCAT1-204ENST00000507282 SMC1BQ8NDV3 1235 aa21.93■■□□□ 1.1
LPCAT1-204ENST00000507282 FANCIQ9NVI1 1328 aa21.93■■□□□ 1.1
LPCAT1-204ENST00000507282 HSP90B1P14625 803 aaKnown RBP21.92■■□□□ 1.1
LPCAT1-204ENST00000507282 APLP1P51693 650 aa21.92■■□□□ 1.1
LPCAT1-204ENST00000507282 POTECB2RU33 542 aa21.91■■□□□ 1.1
LPCAT1-204ENST00000507282 IRS4O14654 1257 aaPredicted RBP21.91■■□□□ 1.1
LPCAT1-204ENST00000507282 GRAPQ13588 217 aa21.91■■□□□ 1.1
LPCAT1-204ENST00000507282 ZBTB38Q8NAP3 1195 aaPredicted RBP21.91■■□□□ 1.1
LPCAT1-204ENST00000507282 CCDC191Q8NCU4 936 aa21.91■■□□□ 1.1
LPCAT1-204ENST00000507282 GRAPLQ8TC17 118 aaPredicted RBP21.91■■□□□ 1.1
LPCAT1-204ENST00000507282 METTL22Q9BUU2 404 aaPredicted RBP21.91■■□□□ 1.1
LPCAT1-204ENST00000507282 DDX60Q8IY21 1712 aaKnown RBP21.91■■□□□ 1.1
LPCAT1-204ENST00000507282 SLC4A2P04920 1241 aa21.9■■□□□ 1.1
LPCAT1-204ENST00000507282 SF3B3Q15393 1217 aaKnown RBP21.9■■□□□ 1.1
LPCAT1-204ENST00000507282 KSR2Q6VAB6 950 aa21.9■■□□□ 1.1
LPCAT1-204ENST00000507282 SP8Q8IXZ3 490 aa21.9■■□□□ 1.1
LPCAT1-204ENST00000507282 LARGE2Q8N3Y3 721 aa21.9■■□□□ 1.1
LPCAT1-204ENST00000507282 MAP3K2Q9Y2U5 619 aa21.9■■□□□ 1.1
LPCAT1-204ENST00000507282 ZNF541Q9H0D2 1346 aa21.89■■□□□ 1.1
LPCAT1-204ENST00000507282 PI4KAP2A4QPH2 592 aa21.89■■□□□ 1.09
LPCAT1-204ENST00000507282 IQCA1LA6NCM1 817 aa21.89■■□□□ 1.09
LPCAT1-204ENST00000507282 FZD9O00144 591 aa21.89■■□□□ 1.09
LPCAT1-204ENST00000507282 TMC4Q7Z404 712 aa21.89■■□□□ 1.09
LPCAT1-204ENST00000507282 SLC51AQ86UW1 340 aa21.89■■□□□ 1.09
LPCAT1-204ENST00000507282 PI4KAP1Q8N8J0 262 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms