RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 CCDC191Q8NCU4 936 aa17.91■□□□□ 0.46
RNF4-208ENST00000507247 MEIS3Q99687 375 aa17.91■□□□□ 0.46
RNF4-208ENST00000507247 DDX19BQ9UMR2 479 aa17.91■□□□□ 0.46
RNF4-208ENST00000507247 ZBTB7BO15156 539 aaPredicted RBP17.9■□□□□ 0.46
RNF4-208ENST00000507247 USP44Q9H0E7 712 aa17.9■□□□□ 0.46
RNF4-208ENST00000507247 CWC25Q9NXE8 425 aaPredicted RBP17.9■□□□□ 0.46
RNF4-208ENST00000507247 NFIXQ14938 502 aa17.89■□□□□ 0.45
RNF4-208ENST00000507247 SUSD4Q5VX71 490 aa17.89■□□□□ 0.45
RNF4-208ENST00000507247 GRM8O00222 908 aa17.88■□□□□ 0.45
RNF4-208ENST00000507247 NBPF7P0C2Y1 421 aaPredicted RBP17.88■□□□□ 0.45
RNF4-208ENST00000507247 PARP10Q53GL7 1025 aa17.88■□□□□ 0.45
RNF4-208ENST00000507247 MSL1Q68DK7 614 aa17.88■□□□□ 0.45
RNF4-208ENST00000507247 JARID2Q92833 1246 aaPredicted RBP17.88■□□□□ 0.45
RNF4-208ENST00000507247 DDX60Q8IY21 1712 aaKnown RBP17.88■□□□□ 0.45
RNF4-208ENST00000507247 UTYO14607 1347 aa17.88■□□□□ 0.45
RNF4-208ENST00000507247 LAMB2P55268 1798 aa17.88■□□□□ 0.45
RNF4-208ENST00000507247 NRXN2Q9P2S2 1712 aa17.87■□□□□ 0.45
RNF4-208ENST00000507247 NTSR2O95665 410 aa17.87■□□□□ 0.45
RNF4-208ENST00000507247 TM4SF1P30408 202 aa17.87■□□□□ 0.45
RNF4-208ENST00000507247 CASP7P55210 303 aa17.87■□□□□ 0.45
RNF4-208ENST00000507247 ZBTB40Q9NUA8 1239 aa17.87■□□□□ 0.45
RNF4-208ENST00000507247 C9orf78Q9NZ63 289 aaPredicted RBP17.87■□□□□ 0.45
RNF4-208ENST00000507247 FAM177BA6PVY3 158 aa17.86■□□□□ 0.45
RNF4-208ENST00000507247 H7C1W4 665 aa17.86■□□□□ 0.45
RNF4-208ENST00000507247 DDR1Q08345 913 aa17.86■□□□□ 0.45
RNF4-208ENST00000507247 RTL5Q5HYW3 569 aaPredicted RBP17.86■□□□□ 0.45
RNF4-208ENST00000507247 UBE3BQ7Z3V4 1068 aa17.86■□□□□ 0.45
RNF4-208ENST00000507247 NLGN1Q8N2Q7 840 aa17.86■□□□□ 0.45
RNF4-208ENST00000507247 SETDB2Q96T68 719 aa17.86■□□□□ 0.45
RNF4-208ENST00000507247 CARMIL3Q8ND23 1372 aa17.86■□□□□ 0.45
RNF4-208ENST00000507247 MYH3P11055 1940 aa17.86■□□□□ 0.45
RNF4-208ENST00000507247 PCCAP05165 728 aaPredicted RBP17.85■□□□□ 0.45
RNF4-208ENST00000507247 PPP1R42Q7Z4L9 355 aa17.85■□□□□ 0.45
RNF4-208ENST00000507247 SYNE4Q8N205 404 aa17.85■□□□□ 0.45
RNF4-208ENST00000507247 ZBTB38Q8NAP3 1195 aaPredicted RBP17.85■□□□□ 0.45
RNF4-208ENST00000507247 FAM89AQ96GI7 184 aa17.85■□□□□ 0.45
RNF4-208ENST00000507247 UTP14AQ9BVJ6 771 aaKnown RBP17.85■□□□□ 0.45
RNF4-208ENST00000507247 C1orf115Q9H7X2 142 aa17.85■□□□□ 0.45
RNF4-208ENST00000507247 TRMT112Q9UI30 125 aaKnown RBP17.85■□□□□ 0.45
RNF4-208ENST00000507247 POLRMTO00411 1230 aaKnown RBP17.84■□□□□ 0.45
RNF4-208ENST00000507247 GNAI3P08754 354 aa17.84■□□□□ 0.45
RNF4-208ENST00000507247 UBTFL1P0CB47 393 aaPredicted RBP17.84■□□□□ 0.45
RNF4-208ENST00000507247 SUCLG2Q96I99 432 aa17.84■□□□□ 0.45
RNF4-208ENST00000507247 NUTM1Q86Y26 1132 aa17.83■□□□□ 0.44
RNF4-208ENST00000507247 SLC16A10Q8TF71 515 aa17.83■□□□□ 0.44
RNF4-208ENST00000507247 KAZALD1Q96I82 304 aa17.83■□□□□ 0.44
RNF4-208ENST00000507247 CHMP4BQ9H444 224 aaKnown RBP17.83■□□□□ 0.44
RNF4-208ENST00000507247 LRRFIP2Q9Y608 721 aaKnown RBP17.83■□□□□ 0.44
RNF4-208ENST00000507247 TNRC6CQ9HCJ0 1690 aaKnown RBP17.83■□□□□ 0.44
RNF4-208ENST00000507247 ABCC12Q96J65 1359 aa17.82■□□□□ 0.44
RNF4-208ENST00000507247 SH3TC1Q8TE82 1336 aa17.82■□□□□ 0.44
RNF4-208ENST00000507247 CDHR2Q9BYE9 1310 aa17.82■□□□□ 0.44
RNF4-208ENST00000507247 SERPINB2P05120 415 aa17.82■□□□□ 0.44
RNF4-208ENST00000507247 MMP10P09238 476 aa17.82■□□□□ 0.44
RNF4-208ENST00000507247 NBPF5PQ86XG9 351 aaPredicted RBP17.82■□□□□ 0.44
RNF4-208ENST00000507247 ANKRD31Q8N7Z5 1873 aa17.82■□□□□ 0.44
RNF4-208ENST00000507247 ERFEQ4G0M1 354 aa17.81■□□□□ 0.44
RNF4-208ENST00000507247 EPHA10Q5JZY3 1008 aa17.81■□□□□ 0.44
RNF4-208ENST00000507247 NYXQ9GZU5 481 aa17.81■□□□□ 0.44
RNF4-208ENST00000507247 IRS4O14654 1257 aaPredicted RBP17.8■□□□□ 0.44
RNF4-208ENST00000507247 ZBTB7AO95365 584 aa17.8■□□□□ 0.44
RNF4-208ENST00000507247 GNAI2P04899 355 aa17.8■□□□□ 0.44
RNF4-208ENST00000507247 PRR5LQ6MZQ0 368 aa17.8■□□□□ 0.44
RNF4-208ENST00000507247 CCDC24Q8N4L8 307 aa17.8■□□□□ 0.44
RNF4-208ENST00000507247 PCDHB15Q9Y5E8 787 aa17.8■□□□□ 0.44
RNF4-208ENST00000507247 AAMPQ13685 434 aa17.79■□□□□ 0.44
RNF4-208ENST00000507247 TPTE2Q6XPS3 522 aa17.79■□□□□ 0.44
RNF4-208ENST00000507247 ANKRD44Q8N8A2 993 aa17.79■□□□□ 0.44
RNF4-208ENST00000507247 PLA2G12BQ9BX93 195 aa17.79■□□□□ 0.44
RNF4-208ENST00000507247 BICC1Q9H694 974 aaKnown RBP17.79■□□□□ 0.44
RNF4-208ENST00000507247 PARP3Q9Y6F1 533 aa17.79■□□□□ 0.44
RNF4-208ENST00000507247 HCLS1P14317 486 aaPredicted RBP17.78■□□□□ 0.44
RNF4-208ENST00000507247 FOXO4P98177 505 aa17.78■□□□□ 0.44
RNF4-208ENST00000507247 ERICH6BQ5W0A0 696 aa17.78■□□□□ 0.44
RNF4-208ENST00000507247 CNBD1Q8NA66 436 aa17.78■□□□□ 0.44
RNF4-208ENST00000507247 MTFR1LQ9H019 292 aa17.78■□□□□ 0.44
RNF4-208ENST00000507247 SPON1Q9HCB6 807 aa17.78■□□□□ 0.44
RNF4-208ENST00000507247 PDE8AO60658 829 aa17.77■□□□□ 0.44
RNF4-208ENST00000507247 GTF2E1P29083 439 aaPredicted RBP17.77■□□□□ 0.44
RNF4-208ENST00000507247 SLC10A5Q5PT55 438 aa17.77■□□□□ 0.44
RNF4-208ENST00000507247 CEP85Q6P2H3 762 aa17.77■□□□□ 0.44
RNF4-208ENST00000507247 ATF5Q9Y2D1 282 aaPredicted RBP17.77■□□□□ 0.44
RNF4-208ENST00000507247 GTF3C3Q9Y5Q9 886 aa17.77■□□□□ 0.44
RNF4-208ENST00000507247 RIC1Q4ADV7 1423 aa17.76■□□□□ 0.43
RNF4-208ENST00000507247 RABL6Q3YEC7 729 aaPredicted RBP17.76■□□□□ 0.43
RNF4-208ENST00000507247 C3orf67Q6ZVT6 689 aa17.76■□□□□ 0.43
RNF4-208ENST00000507247 SIRT2Q8IXJ6 389 aa17.76■□□□□ 0.43
RNF4-208ENST00000507247 HDAC5Q9UQL6 1122 aa17.76■□□□□ 0.43
RNF4-208ENST00000507247 PNMA6EA0A0J9YXQ4 647 aa17.75■□□□□ 0.43
RNF4-208ENST00000507247 NPHP1O15259 732 aa17.75■□□□□ 0.43
RNF4-208ENST00000507247 CTSWP56202 376 aa17.75■□□□□ 0.43
RNF4-208ENST00000507247 KIF13BQ9NQT8 1826 aa17.75■□□□□ 0.43
RNF4-208ENST00000507247 TAF1P21675 1872 aa17.74■□□□□ 0.43
RNF4-208ENST00000507247 ST5P78524 1137 aa17.74■□□□□ 0.43
RNF4-208ENST00000507247 ATP8B2P98198 1209 aa17.74■□□□□ 0.43
RNF4-208ENST00000507247 MTX1Q13505 466 aa17.74■□□□□ 0.43
RNF4-208ENST00000507247 LMBR1LQ6UX01 489 aa17.74■□□□□ 0.43
RNF4-208ENST00000507247 SGIP1Q9BQI5 828 aa17.74■□□□□ 0.43
RNF4-208ENST00000507247 COL11A2P13942 1736 aaPredicted RBP17.74■□□□□ 0.43
RNF4-208ENST00000507247 SPEF2Q9C093 1822 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms