RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 CFAP74Q9C0B2 1584 aa7.37□□□□□ -1.23
CLDND1-213ENST00000506927 ZFYVE16Q7Z3T8 1539 aa7.37□□□□□ -1.23
CLDND1-213ENST00000506927 LMTK2Q8IWU2 1503 aa7.37□□□□□ -1.23
CLDND1-213ENST00000506927 ABCC11Q96J66 1382 aa7.37□□□□□ -1.23
CLDND1-213ENST00000506927 EVC2Q86UK5 1308 aa7.37□□□□□ -1.23
CLDND1-213ENST00000506927 KIF16BQ96L93 1317 aa7.37□□□□□ -1.23
CLDND1-213ENST00000506927 POM121CA8CG34 1229 aa7.37□□□□□ -1.23
CLDND1-213ENST00000506927 ADH1AP07327 375 aa7.37□□□□□ -1.23
CLDND1-213ENST00000506927 SOX11P35716 441 aa7.37□□□□□ -1.23
CLDND1-213ENST00000506927 SCTRP47872 440 aa7.37□□□□□ -1.23
CLDND1-213ENST00000506927 RGS3P49796 1198 aa7.37□□□□□ -1.23
CLDND1-213ENST00000506927 RELBQ01201 579 aa7.37□□□□□ -1.23
CLDND1-213ENST00000506927 SLFNL1Q499Z3 407 aa7.37□□□□□ -1.23
CLDND1-213ENST00000506927 KDF1Q8NAX2 398 aaPredicted RBP7.37□□□□□ -1.23
CLDND1-213ENST00000506927 CDCA7Q9BWT1 371 aaPredicted RBP7.37□□□□□ -1.23
CLDND1-213ENST00000506927 CHD1O14646 1710 aa7.37□□□□□ -1.23
CLDND1-213ENST00000506927 ATP7AQ04656 1500 aa7.37□□□□□ -1.23
CLDND1-213ENST00000506927 IL16Q14005 1332 aa7.36□□□□□ -1.23
CLDND1-213ENST00000506927 ERVK-9P63128 1117 aa7.36□□□□□ -1.23
CLDND1-213ENST00000506927 SKOR2Q2VWA4 1001 aaPredicted RBP7.36□□□□□ -1.23
CLDND1-213ENST00000506927 GLIPR1L2Q4G1C9 344 aa7.36□□□□□ -1.23
CLDND1-213ENST00000506927 ZKSCAN2Q63HK3 967 aa7.36□□□□□ -1.23
CLDND1-213ENST00000506927 CC2D2BQ6DHV5 1058 aa7.36□□□□□ -1.23
CLDND1-213ENST00000506927 RNF135Q8IUD6 432 aa7.36□□□□□ -1.23
CLDND1-213ENST00000506927 FTSJ3Q8IY81 847 aaKnown RBP7.36□□□□□ -1.23
CLDND1-213ENST00000506927 FNBP4Q8N3X1 1017 aaPredicted RBP7.36□□□□□ -1.23
CLDND1-213ENST00000506927 ALG2Q9H553 416 aa7.36□□□□□ -1.23
CLDND1-213ENST00000506927 ZNF395Q9H8N7 513 aaPredicted RBP7.36□□□□□ -1.23
CLDND1-213ENST00000506927 DDX19BQ9UMR2 479 aa7.36□□□□□ -1.23
CLDND1-213ENST00000506927 CLTCL1P53675 1640 aa7.36□□□□□ -1.23
CLDND1-213ENST00000506927 NRXN1Q9ULB1 1477 aa7.36□□□□□ -1.23
CLDND1-213ENST00000506927 INO80Q9ULG1 1556 aaPredicted RBP7.35□□□□□ -1.23
CLDND1-213ENST00000506927 SOBPA7XYQ1 873 aa7.35□□□□□ -1.23
CLDND1-213ENST00000506927 KIF3BO15066 747 aa7.35□□□□□ -1.23
CLDND1-213ENST00000506927 SPINT1O43278 529 aa7.35□□□□□ -1.23
CLDND1-213ENST00000506927 C20orf194Q5TEA3 1177 aa7.35□□□□□ -1.23
CLDND1-213ENST00000506927 MYOM1P52179 1685 aa7.35□□□□□ -1.23
CLDND1-213ENST00000506927 SOS2Q07890 1332 aaPredicted RBP7.34□□□□□ -1.23
CLDND1-213ENST00000506927 EFCAB6Q5THR3 1501 aa7.34□□□□□ -1.23
CLDND1-213ENST00000506927 PTGIRP43119 386 aa7.34□□□□□ -1.23
CLDND1-213ENST00000506927 RARSP54136 660 aaKnown RBP7.34□□□□□ -1.23
CLDND1-213ENST00000506927 HDAC1Q13547 482 aaPredicted RBP7.34□□□□□ -1.23
CLDND1-213ENST00000506927 PROSER2Q86WR7 435 aaPredicted RBP7.34□□□□□ -1.23
CLDND1-213ENST00000506927 HSCBQ8IWL3 235 aa7.34□□□□□ -1.23
CLDND1-213ENST00000506927 FRAT1Q92837 279 aaPredicted RBP7.34□□□□□ -1.23
CLDND1-213ENST00000506927 INSM2Q96T92 566 aaPredicted RBP7.34□□□□□ -1.23
CLDND1-213ENST00000506927 C14orf93Q9H972 538 aaKnown RBP7.34□□□□□ -1.23
CLDND1-213ENST00000506927 CHMP5Q9NZZ3 219 aa7.34□□□□□ -1.23
CLDND1-213ENST00000506927 ERVK-7P63135 1459 aa7.34□□□□□ -1.23
CLDND1-213ENST00000506927 TRAPPC8Q9Y2L5 1435 aa7.34□□□□□ -1.23
CLDND1-213ENST00000506927 IFT172Q9UG01 1749 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 ZNF518AQ6AHZ1 1483 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 GOLGA6L3A6NEY3 463 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 A6NJR5 290 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 ATP5J2-PTCD1G3V325 749 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 GOLGA6L22H0YM25 854 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 PIK3CDO00329 1044 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 MAN1A2O60476 641 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 CTSOP43234 321 aaPredicted RBP7.33□□□□□ -1.24
CLDND1-213ENST00000506927 CCDC146Q8IYE0 955 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 DZIP1LQ8IYY4 767 aaKnown RBP7.33□□□□□ -1.24
CLDND1-213ENST00000506927 ADAMTS19Q8TE59 1207 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 ANP32BQ92688 251 aaKnown RBP7.33□□□□□ -1.24
CLDND1-213ENST00000506927 TBC1D32Q96NH3 1257 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 GBP4Q96PP9 640 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 OSBPL3Q9H4L5 887 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 TERF2IPQ9NYB0 399 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 DOLKQ9UPQ8 538 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 ABCA9Q8IUA7 1624 aa7.33□□□□□ -1.24
CLDND1-213ENST00000506927 FIGNL2A6NMB9 653 aa7.32□□□□□ -1.24
CLDND1-213ENST00000506927 TTLL8A6PVC2 850 aa7.32□□□□□ -1.24
CLDND1-213ENST00000506927 TRAK2O60296 914 aa7.32□□□□□ -1.24
CLDND1-213ENST00000506927 BCAR3O75815 825 aa7.32□□□□□ -1.24
CLDND1-213ENST00000506927 MVPQ14764 893 aaKnown RBP7.32□□□□□ -1.24
CLDND1-213ENST00000506927 ALDH1L2Q3SY69 923 aa7.32□□□□□ -1.24
CLDND1-213ENST00000506927 HDGFL1Q5TGJ6 251 aa7.32□□□□□ -1.24
CLDND1-213ENST00000506927 TCP11L2Q8N4U5 519 aa7.32□□□□□ -1.24
CLDND1-213ENST00000506927 ESF1Q9H501 851 aaKnown RBP7.32□□□□□ -1.24
CLDND1-213ENST00000506927 DNMT3LQ9UJW3 386 aa7.32□□□□□ -1.24
CLDND1-213ENST00000506927 ANKRD36BQ8N2N9 1353 aa7.32□□□□□ -1.24
CLDND1-213ENST00000506927 ABCA6Q8N139 1617 aa7.31□□□□□ -1.24
CLDND1-213ENST00000506927 FRAT2O75474 233 aaPredicted RBP7.31□□□□□ -1.24
CLDND1-213ENST00000506927 MYCP01106 439 aaPredicted RBP7.31□□□□□ -1.24
CLDND1-213ENST00000506927 MRE11P49959 708 aa7.31□□□□□ -1.24
CLDND1-213ENST00000506927 OXLD1Q5BKU9 147 aa7.31□□□□□ -1.24
CLDND1-213ENST00000506927 CFAP70Q5T0N1 1121 aa7.31□□□□□ -1.24
CLDND1-213ENST00000506927 PLPP7Q8NBV4 271 aa7.31□□□□□ -1.24
CLDND1-213ENST00000506927 NSD3Q9BZ95 1437 aa7.31□□□□□ -1.24
CLDND1-213ENST00000506927 POLMQ9NP87 494 aaPredicted RBP7.31□□□□□ -1.24
CLDND1-213ENST00000506927 REREQ9P2R6 1566 aa7.31□□□□□ -1.24
CLDND1-213ENST00000506927 ATAD2Q6PL18 1390 aa7.31□□□□□ -1.24
CLDND1-213ENST00000506927 MED14O60244 1454 aa7.3□□□□□ -1.24
CLDND1-213ENST00000506927 A0A1W2PRU2 124 aa7.3□□□□□ -1.24
CLDND1-213ENST00000506927 LMOD3Q0VAK6 560 aa7.3□□□□□ -1.24
CLDND1-213ENST00000506927 USP4Q13107 963 aa7.3□□□□□ -1.24
CLDND1-213ENST00000506927 CYP2U1Q7Z449 544 aa7.3□□□□□ -1.24
CLDND1-213ENST00000506927 AFAP1Q8N556 730 aa7.3□□□□□ -1.24
CLDND1-213ENST00000506927 SNX21Q969T3 373 aa7.3□□□□□ -1.24
CLDND1-213ENST00000506927 GCC1Q96CN9 775 aa7.3□□□□□ -1.24
CLDND1-213ENST00000506927 C22orf23Q9BZE7 217 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms