RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 AIDAQ96BJ3 306 aa14.02□□□□□ -0.17
SNCA-210ENST00000506691 WBP1LQ9NX94 342 aa14.02□□□□□ -0.17
SNCA-210ENST00000506691 FOXN1O15353 648 aa14.01□□□□□ -0.17
SNCA-210ENST00000506691 ALDH1B1P30837 517 aa14.01□□□□□ -0.17
SNCA-210ENST00000506691 TPTE2Q6XPS3 522 aa14.01□□□□□ -0.17
SNCA-210ENST00000506691 MBIPQ9NS73 344 aa14.01□□□□□ -0.17
SNCA-210ENST00000506691 MIS18AQ9NYP9 233 aa14.01□□□□□ -0.17
SNCA-210ENST00000506691 MKRN1Q9UHC7 482 aaKnown RBP14.01□□□□□ -0.17
SNCA-210ENST00000506691 HACL1Q9UJ83 578 aa14.01□□□□□ -0.17
SNCA-210ENST00000506691 TBC1D2BQ9UPU7 963 aa14.01□□□□□ -0.17
SNCA-210ENST00000506691 THSD7BQ9C0I4 1608 aa14.01□□□□□ -0.17
SNCA-210ENST00000506691 RIC1Q4ADV7 1423 aa14□□□□□ -0.17
SNCA-210ENST00000506691 FZD9O00144 591 aa14□□□□□ -0.17
SNCA-210ENST00000506691 MAP2K1Q02750 393 aaPredicted RBP14□□□□□ -0.17
SNCA-210ENST00000506691 SLFN5Q08AF3 891 aa14□□□□□ -0.17
SNCA-210ENST00000506691 DZIP3Q86Y13 1208 aaKnown RBP14□□□□□ -0.17
SNCA-210ENST00000506691 GPC2Q8N158 579 aa14□□□□□ -0.17
SNCA-210ENST00000506691 NPHP1O15259 732 aa13.99□□□□□ -0.17
SNCA-210ENST00000506691 POTEIP0CG38 1075 aa13.99□□□□□ -0.17
SNCA-210ENST00000506691 POTEJP0CG39 1038 aa13.99□□□□□ -0.17
SNCA-210ENST00000506691 PSMD1Q99460 953 aa13.99□□□□□ -0.17
SNCA-210ENST00000506691 CACNA1SQ13698 1873 aa13.99□□□□□ -0.17
SNCA-210ENST00000506691 SNED1Q8TER0 1413 aa13.98□□□□□ -0.17
SNCA-210ENST00000506691 KCNQ3O43525 872 aa13.98□□□□□ -0.17
SNCA-210ENST00000506691 CT47B1P0C2W7 299 aaPredicted RBP13.98□□□□□ -0.17
SNCA-210ENST00000506691 VEGFBP49765 207 aa13.98□□□□□ -0.17
SNCA-210ENST00000506691 NBPF5PQ86XG9 351 aaPredicted RBP13.98□□□□□ -0.17
SNCA-210ENST00000506691 TRMT2AQ8IZ69 625 aaKnown RBP13.98□□□□□ -0.17
SNCA-210ENST00000506691 ZNF428Q96B54 188 aa13.98□□□□□ -0.17
SNCA-210ENST00000506691 IBTKQ9P2D0 1353 aaPredicted RBP13.97□□□□□ -0.17
SNCA-210ENST00000506691 ERBB4Q15303 1308 aa13.97□□□□□ -0.17
SNCA-210ENST00000506691 KDM3BQ7LBC6 1761 aa13.97□□□□□ -0.17
SNCA-210ENST00000506691 A1BGP04217 495 aa13.97□□□□□ -0.17
SNCA-210ENST00000506691 EPHX2P34913 555 aa13.97□□□□□ -0.17
SNCA-210ENST00000506691 CRY2Q49AN0 593 aa13.97□□□□□ -0.17
SNCA-210ENST00000506691 SLC34A2O95436 690 aa13.96□□□□□ -0.17
SNCA-210ENST00000506691 IARSP41252 1262 aaKnown RBP13.96□□□□□ -0.17
SNCA-210ENST00000506691 DEFB115Q30KQ5 88 aa13.96□□□□□ -0.17
SNCA-210ENST00000506691 VPS33BQ9H267 617 aa13.96□□□□□ -0.17
SNCA-210ENST00000506691 FANCIQ9NVI1 1328 aa13.95□□□□□ -0.18
SNCA-210ENST00000506691 DUSP27Q5VZP5 1158 aa13.95□□□□□ -0.18
SNCA-210ENST00000506691 NYXQ9GZU5 481 aa13.95□□□□□ -0.18
SNCA-210ENST00000506691 ZNF330Q9Y3S2 320 aaPredicted RBP13.95□□□□□ -0.18
SNCA-210ENST00000506691 HOXA10P31260 410 aaPredicted RBP13.94□□□□□ -0.18
SNCA-210ENST00000506691 ECE1P42892 770 aa13.94□□□□□ -0.18
SNCA-210ENST00000506691 CCDC30Q5VVM6 783 aa13.94□□□□□ -0.18
SNCA-210ENST00000506691 CNTROBQ8N137 903 aa13.94□□□□□ -0.18
SNCA-210ENST00000506691 JDP2Q8WYK2 163 aa13.94□□□□□ -0.18
SNCA-210ENST00000506691 TSR2Q969E8 191 aaKnown RBP13.94□□□□□ -0.18
SNCA-210ENST00000506691 ZNF219Q9P2Y4 722 aaPredicted RBP13.94□□□□□ -0.18
SNCA-210ENST00000506691 USP16Q9Y5T5 823 aa13.94□□□□□ -0.18
SNCA-210ENST00000506691 WDR33Q9C0J8 1336 aaKnown RBP13.93□□□□□ -0.18
SNCA-210ENST00000506691 ZNF541Q9H0D2 1346 aa13.93□□□□□ -0.18
SNCA-210ENST00000506691 ERVV-1B6SEH8 477 aa13.93□□□□□ -0.18
SNCA-210ENST00000506691 TWISTNBQ3B726 338 aaPredicted RBP13.93□□□□□ -0.18
SNCA-210ENST00000506691 SPINK5Q9NQ38 1064 aaPredicted RBP13.93□□□□□ -0.18
SNCA-210ENST00000506691 NIP7Q9Y221 180 aaKnown RBP eCLIP13.93□□□□□ -0.18
SNCA-210ENST00000506691 LAMB4A4D0S4 1761 aa13.93□□□□□ -0.18
SNCA-210ENST00000506691 CA12O43570 354 aa13.92□□□□□ -0.18
SNCA-210ENST00000506691 HSPA8P11142 646 aaKnown RBP13.92□□□□□ -0.18
SNCA-210ENST00000506691 RGS19P49795 217 aa13.92□□□□□ -0.18
SNCA-210ENST00000506691 USP50Q70EL3 339 aaPredicted RBP13.92□□□□□ -0.18
SNCA-210ENST00000506691 C8orf58Q8NAV2 365 aa13.92□□□□□ -0.18
SNCA-210ENST00000506691 CDCA7LQ96GN5 454 aa13.92□□□□□ -0.18
SNCA-210ENST00000506691 HHIPL1Q96JK4 782 aa13.92□□□□□ -0.18
SNCA-210ENST00000506691 DDX21Q9NR30 783 aaKnown RBP eCLIP13.92□□□□□ -0.18
SNCA-210ENST00000506691 VAMP4O75379 141 aa13.91□□□□□ -0.18
SNCA-210ENST00000506691 MAP2K2P36507 400 aa13.91□□□□□ -0.18
SNCA-210ENST00000506691 LBX1P52954 281 aa13.91□□□□□ -0.18
SNCA-210ENST00000506691 EIF6P56537 245 aaKnown RBP13.91□□□□□ -0.18
SNCA-210ENST00000506691 EXOSC9Q06265 439 aaKnown RBP13.91□□□□□ -0.18
SNCA-210ENST00000506691 EAPPQ56P03 285 aaPredicted RBP13.91□□□□□ -0.18
SNCA-210ENST00000506691 HDGFL1Q5TGJ6 251 aa13.91□□□□□ -0.18
SNCA-210ENST00000506691 CCDC24Q8N4L8 307 aa13.91□□□□□ -0.18
SNCA-210ENST00000506691 ABHD8Q96I13 439 aa13.91□□□□□ -0.18
SNCA-210ENST00000506691 ZNF277Q9NRM2 450 aaPredicted RBP13.91□□□□□ -0.18
SNCA-210ENST00000506691 DBF4Q9UBU7 674 aaPredicted RBP13.91□□□□□ -0.18
SNCA-210ENST00000506691 RNF123Q5XPI4 1314 aa13.9□□□□□ -0.18
SNCA-210ENST00000506691 CDHR2Q9BYE9 1310 aa13.9□□□□□ -0.18
SNCA-210ENST00000506691 EIF2S2P20042 333 aaKnown RBP13.9□□□□□ -0.18
SNCA-210ENST00000506691 LMOD1P29536 600 aaPredicted RBP13.9□□□□□ -0.18
SNCA-210ENST00000506691 SYNE4Q8N205 404 aa13.9□□□□□ -0.18
SNCA-210ENST00000506691 STK31Q9BXU1 1019 aa13.9□□□□□ -0.18
SNCA-210ENST00000506691 HYPKQ9NX55 129 aa13.9□□□□□ -0.18
SNCA-210ENST00000506691 PCDH10Q9P2E7 1040 aa13.9□□□□□ -0.18
SNCA-210ENST00000506691 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.18
SNCA-210ENST00000506691 TRPM7Q96QT4 1865 aa13.9□□□□□ -0.18
SNCA-210ENST00000506691 NBPF26B4DH59 902 aa13.89□□□□□ -0.19
SNCA-210ENST00000506691 NBPF10Q6P3W6 841 aaKnown RBP13.89□□□□□ -0.19
SNCA-210ENST00000506691 NBPF15Q8N660 670 aa13.89□□□□□ -0.19
SNCA-210ENST00000506691 CRAMP1Q96RY5 1269 aa13.89□□□□□ -0.19
SNCA-210ENST00000506691 BEGAINQ9BUH8 593 aa13.89□□□□□ -0.19
SNCA-210ENST00000506691 PRAMEF22A3QJZ6 481 aa13.88□□□□□ -0.19
SNCA-210ENST00000506691 ELL2O00472 640 aaPredicted RBP13.88□□□□□ -0.19
SNCA-210ENST00000506691 KRT24Q2M2I5 525 aa13.88□□□□□ -0.19
SNCA-210ENST00000506691 ALDH1L2Q3SY69 923 aa13.88□□□□□ -0.19
SNCA-210ENST00000506691 MAP1SQ66K74 1059 aaPredicted RBP13.88□□□□□ -0.19
SNCA-210ENST00000506691 TSPYL6Q8N831 410 aa13.88□□□□□ -0.19
SNCA-210ENST00000506691 GTF2E1P29083 439 aaPredicted RBP13.87□□□□□ -0.19
SNCA-210ENST00000506691 SCNN1DP51172 638 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms