RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 ANKRD13DQ6ZTN6 518 aa18.88■□□□□ 0.61
DSP-203ENST00000506617 SSH1Q8WYL5 1049 aa18.88■□□□□ 0.61
DSP-203ENST00000506617 LAMB2P55268 1798 aa18.87■□□□□ 0.61
DSP-203ENST00000506617 TCIRG1Q13488 830 aa18.87■□□□□ 0.61
DSP-203ENST00000506617 MRPL50Q8N5N7 158 aaKnown RBP18.87■□□□□ 0.61
DSP-203ENST00000506617 PDZRN3Q9UPQ7 1066 aa18.87■□□□□ 0.61
DSP-203ENST00000506617 RIC1Q4ADV7 1423 aa18.86■□□□□ 0.61
DSP-203ENST00000506617 YY1P25490 414 aa18.86■□□□□ 0.61
DSP-203ENST00000506617 ERFEQ4G0M1 354 aa18.86■□□□□ 0.61
DSP-203ENST00000506617 PPP1R42Q7Z4L9 355 aa18.86■□□□□ 0.61
DSP-203ENST00000506617 NLRP10Q86W26 655 aa18.86■□□□□ 0.61
DSP-203ENST00000506617 SLX4Q8IY92 1834 aa18.86■□□□□ 0.61
DSP-203ENST00000506617 PTPRCP08575 1304 aa18.85■□□□□ 0.61
DSP-203ENST00000506617 DDX58O95786 925 aaKnown RBP18.85■□□□□ 0.61
DSP-203ENST00000506617 RIC3Q7Z5B4 369 aa18.85■□□□□ 0.61
DSP-203ENST00000506617 ARHGAP45Q92619 1136 aa18.85■□□□□ 0.61
DSP-203ENST00000506617 ZNF622Q969S3 477 aaKnown RBP eCLIP18.85■□□□□ 0.61
DSP-203ENST00000506617 DDX60Q8IY21 1712 aaKnown RBP18.85■□□□□ 0.61
DSP-203ENST00000506617 KIF16BQ96L93 1317 aa18.84■□□□□ 0.61
DSP-203ENST00000506617 SRGNP10124 158 aa18.84■□□□□ 0.61
DSP-203ENST00000506617 G2E3Q7L622 706 aa18.84■□□□□ 0.61
DSP-203ENST00000506617 TTLL6Q8N841 843 aa18.84■□□□□ 0.61
DSP-203ENST00000506617 ISCA1Q9BUE6 129 aa18.84■□□□□ 0.61
DSP-203ENST00000506617 UTP14AQ9BVJ6 771 aaKnown RBP18.84■□□□□ 0.61
DSP-203ENST00000506617 SMC4Q9NTJ3 1288 aa18.84■□□□□ 0.61
DSP-203ENST00000506617 RCAN3Q9UKA8 241 aa18.84■□□□□ 0.61
DSP-203ENST00000506617 ATP5J2-PTCD1G3V325 749 aa18.83■□□□□ 0.6
DSP-203ENST00000506617 FLIIQ13045 1269 aa18.83■□□□□ 0.6
DSP-203ENST00000506617 MASTLQ96GX5 879 aa18.83■□□□□ 0.6
DSP-203ENST00000506617 RNF123Q5XPI4 1314 aa18.82■□□□□ 0.6
DSP-203ENST00000506617 KLRG2A4D1S0 409 aaPredicted RBP18.82■□□□□ 0.6
DSP-203ENST00000506617 STYK1Q6J9G0 422 aa18.82■□□□□ 0.6
DSP-203ENST00000506617 SBF1O95248 1867 aa18.82■□□□□ 0.6
DSP-203ENST00000506617 ADCY9O60503 1353 aa18.81■□□□□ 0.6
DSP-203ENST00000506617 IPO8O15397 1037 aaKnown RBP18.81■□□□□ 0.6
DSP-203ENST00000506617 KSR2Q6VAB6 950 aa18.81■□□□□ 0.6
DSP-203ENST00000506617 ARHGAP27Q6ZUM4 889 aa18.81■□□□□ 0.6
DSP-203ENST00000506617 MYD88Q99836 296 aa18.81■□□□□ 0.6
DSP-203ENST00000506617 TRMT112Q9UI30 125 aaKnown RBP18.81■□□□□ 0.6
DSP-203ENST00000506617 FER1L6Q2WGJ9 1857 aa18.81■□□□□ 0.6
DSP-203ENST00000506617 CCDC88AQ3V6T2 1871 aa18.8■□□□□ 0.6
DSP-203ENST00000506617 PI4KAP2A4QPH2 592 aa18.8■□□□□ 0.6
DSP-203ENST00000506617 NPR1P16066 1061 aa18.8■□□□□ 0.6
DSP-203ENST00000506617 PI4KAP1Q8N8J0 262 aa18.8■□□□□ 0.6
DSP-203ENST00000506617 CNKSR1Q969H4 720 aa18.8■□□□□ 0.6
DSP-203ENST00000506617 MAP3K2Q9Y2U5 619 aa18.8■□□□□ 0.6
DSP-203ENST00000506617 SH3TC1Q8TE82 1336 aa18.79■□□□□ 0.6
DSP-203ENST00000506617 CRY2Q49AN0 593 aa18.79■□□□□ 0.6
DSP-203ENST00000506617 PRPF40BQ6NWY9 871 aaKnown RBP18.79■□□□□ 0.6
DSP-203ENST00000506617 C3orf67Q6ZVT6 689 aa18.79■□□□□ 0.6
DSP-203ENST00000506617 SYNE4Q8N205 404 aa18.79■□□□□ 0.6
DSP-203ENST00000506617 METTL22Q9BUU2 404 aaPredicted RBP18.79■□□□□ 0.6
DSP-203ENST00000506617 BCAR3O75815 825 aa18.78■□□□□ 0.6
DSP-203ENST00000506617 TRIM28Q13263 835 aaKnown RBP18.78■□□□□ 0.6
DSP-203ENST00000506617 FKBP5Q13451 457 aaPredicted RBP18.78■□□□□ 0.6
DSP-203ENST00000506617 API5Q9BZZ5 524 aaKnown RBP18.78■□□□□ 0.6
DSP-203ENST00000506617 ZNF219Q9P2Y4 722 aaPredicted RBP18.78■□□□□ 0.6
DSP-203ENST00000506617 C21orf2O43822 256 aa18.77■□□□□ 0.6
DSP-203ENST00000506617 HCLS1P14317 486 aaPredicted RBP18.77■□□□□ 0.6
DSP-203ENST00000506617 SLC10A5Q5PT55 438 aa18.77■□□□□ 0.6
DSP-203ENST00000506617 BCL2L13Q9BXK5 485 aa18.77■□□□□ 0.6
DSP-203ENST00000506617 NOB1Q9ULX3 412 aaKnown RBP18.77■□□□□ 0.6
DSP-203ENST00000506617 TAF1P21675 1872 aa18.76■□□□□ 0.59
DSP-203ENST00000506617 RASSF7Q02833 373 aa18.76■□□□□ 0.59
DSP-203ENST00000506617 RPGRQ92834 1020 aaKnown RBP18.76■□□□□ 0.59
DSP-203ENST00000506617 FAM89AQ96GI7 184 aa18.76■□□□□ 0.59
DSP-203ENST00000506617 NLRP3Q96P20 1036 aa18.76■□□□□ 0.59
DSP-203ENST00000506617 MS4A1P11836 297 aa18.75■□□□□ 0.59
DSP-203ENST00000506617 RTL5Q5HYW3 569 aaPredicted RBP18.75■□□□□ 0.59
DSP-203ENST00000506617 ZKSCAN2Q63HK3 967 aa18.75■□□□□ 0.59
DSP-203ENST00000506617 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.75■□□□□ 0.59
DSP-203ENST00000506617 CCDC191Q8NCU4 936 aa18.75■□□□□ 0.59
DSP-203ENST00000506617 DNAAF4Q8WXU2 420 aa18.75■□□□□ 0.59
DSP-203ENST00000506617 MYH3P11055 1940 aa18.74■□□□□ 0.59
DSP-203ENST00000506617 IGKV5-2P06315 115 aa18.74■□□□□ 0.59
DSP-203ENST00000506617 NEXNQ0ZGT2 675 aa18.74■□□□□ 0.59
DSP-203ENST00000506617 ATF7IPQ6VMQ6 1270 aa18.74■□□□□ 0.59
DSP-203ENST00000506617 CWC25Q9NXE8 425 aaPredicted RBP18.74■□□□□ 0.59
DSP-203ENST00000506617 TIAM2Q8IVF5 1701 aa18.74■□□□□ 0.59
DSP-203ENST00000506617 DICER1Q9UPY3 1922 aaKnown RBP18.73■□□□□ 0.59
DSP-203ENST00000506617 NFKBIEO00221 500 aa18.73■□□□□ 0.59
DSP-203ENST00000506617 ALDH1B1P30837 517 aa18.73■□□□□ 0.59
DSP-203ENST00000506617 HOXA10P31260 410 aaPredicted RBP18.73■□□□□ 0.59
DSP-203ENST00000506617 CWF19L2Q2TBE0 894 aaKnown RBP18.73■□□□□ 0.59
DSP-203ENST00000506617 ZBTB38Q8NAP3 1195 aaPredicted RBP18.73■□□□□ 0.59
DSP-203ENST00000506617 RBM17Q96I25 401 aaKnown RBP18.73■□□□□ 0.59
DSP-203ENST00000506617 NEURL1BA8MQ27 555 aa18.72■□□□□ 0.59
DSP-203ENST00000506617 IRS4O14654 1257 aaPredicted RBP18.72■□□□□ 0.59
DSP-203ENST00000506617 PCCAP05165 728 aaPredicted RBP18.72■□□□□ 0.59
DSP-203ENST00000506617 LINS1Q8NG48 757 aa18.72■□□□□ 0.59
DSP-203ENST00000506617 C7orf43Q8WVR3 580 aa18.72■□□□□ 0.59
DSP-203ENST00000506617 F6X3S4 739 aa18.71■□□□□ 0.59
DSP-203ENST00000506617 CENPBP07199 599 aaPredicted RBP18.71■□□□□ 0.59
DSP-203ENST00000506617 SOGA3Q5TF21 947 aa18.71■□□□□ 0.59
DSP-203ENST00000506617 ZNF784Q8NCA9 323 aaPredicted RBP18.71■□□□□ 0.59
DSP-203ENST00000506617 JARID2Q92833 1246 aaPredicted RBP18.71■□□□□ 0.59
DSP-203ENST00000506617 CRAMP1Q96RY5 1269 aa18.71■□□□□ 0.59
DSP-203ENST00000506617 ABCC4O15439 1325 aa18.71■□□□□ 0.59
DSP-203ENST00000506617 COL4A1P02462 1669 aa18.7■□□□□ 0.58
DSP-203ENST00000506617 ALDH1L1O75891 902 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms