RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 HDAC5Q9UQL6 1122 aa14.9□□□□□ -0.02
LIN54-206ENST00000506560 CYP19A1P11511 503 aaPredicted RBP14.9□□□□□ -0.02
LIN54-206ENST00000506560 GPTP24298 496 aa14.9□□□□□ -0.02
LIN54-206ENST00000506560 EDC3Q96F86 508 aaKnown RBP14.9□□□□□ -0.02
LIN54-206ENST00000506560 C8orf37Q96NL8 207 aa14.9□□□□□ -0.02
LIN54-206ENST00000506560 ECHDC1Q9NTX5 307 aa14.9□□□□□ -0.02
LIN54-206ENST00000506560 SPATA31A5Q5VU36 1347 aa14.9□□□□□ -0.02
LIN54-206ENST00000506560 SPATA31A7Q8IWB4 1347 aa14.9□□□□□ -0.02
LIN54-206ENST00000506560 USP42Q9H9J4 1324 aaKnown RBP14.9□□□□□ -0.02
LIN54-206ENST00000506560 KCNQ2O43526 872 aa14.89□□□□□ -0.03
LIN54-206ENST00000506560 ERC1Q8IUD2 1116 aa14.89□□□□□ -0.03
LIN54-206ENST00000506560 COPRSQ9NQ92 184 aa14.89□□□□□ -0.03
LIN54-206ENST00000506560 CWC27Q6UX04 472 aaKnown RBP14.89□□□□□ -0.03
LIN54-206ENST00000506560 FAM89AQ96GI7 184 aa14.89□□□□□ -0.03
LIN54-206ENST00000506560 BOLA2Q9H3K6 86 aa14.89□□□□□ -0.03
LIN54-206ENST00000506560 FAM98CQ17RN3 349 aaKnown RBP14.88□□□□□ -0.03
LIN54-206ENST00000506560 ISCA1Q9BUE6 129 aa14.88□□□□□ -0.03
LIN54-206ENST00000506560 GLRX3O76003 335 aaKnown RBP14.88□□□□□ -0.03
LIN54-206ENST00000506560 TCIRG1Q13488 830 aa14.88□□□□□ -0.03
LIN54-206ENST00000506560 VSIG10Q8N0Z9 540 aa14.88□□□□□ -0.03
LIN54-206ENST00000506560 TBC1D2BQ9UPU7 963 aa14.88□□□□□ -0.03
LIN54-206ENST00000506560 SLIT2O94813 1529 aa14.87□□□□□ -0.03
LIN54-206ENST00000506560 TTC41PQ6P2S7 1318 aa14.87□□□□□ -0.03
LIN54-206ENST00000506560 K7ELQ4 463 aaPredicted RBP14.87□□□□□ -0.03
LIN54-206ENST00000506560 STARD3NLO95772 234 aa14.87□□□□□ -0.03
LIN54-206ENST00000506560 CHGBP05060 677 aa14.87□□□□□ -0.03
LIN54-206ENST00000506560 PTF1AQ7RTS3 328 aa14.87□□□□□ -0.03
LIN54-206ENST00000506560 DBNLQ9UJU6 430 aaKnown RBP14.87□□□□□ -0.03
LIN54-206ENST00000506560 KCNQ4P56696 695 aa14.87□□□□□ -0.03
LIN54-206ENST00000506560 LRRC24Q50LG9 513 aa14.87□□□□□ -0.03
LIN54-206ENST00000506560 CNTROBQ8N137 903 aa14.87□□□□□ -0.03
LIN54-206ENST00000506560 CCDC191Q8NCU4 936 aa14.87□□□□□ -0.03
LIN54-206ENST00000506560 PUS3Q9BZE2 481 aaKnown RBP14.87□□□□□ -0.03
LIN54-206ENST00000506560 RABEP1Q15276 862 aa14.86□□□□□ -0.03
LIN54-206ENST00000506560 DDIT3P35638 169 aa14.86□□□□□ -0.03
LIN54-206ENST00000506560 SGSM2O43147 1006 aa14.85□□□□□ -0.03
LIN54-206ENST00000506560 TNNI3KQ59H18 835 aa14.85□□□□□ -0.03
LIN54-206ENST00000506560 ATG9AQ7Z3C6 839 aa14.85□□□□□ -0.03
LIN54-206ENST00000506560 DBNDD2Q9BQY9 259 aa14.85□□□□□ -0.03
LIN54-206ENST00000506560 FPGT-TNNI3KV9GXZ4 949 aa14.85□□□□□ -0.03
LIN54-206ENST00000506560 FAM182BQ5T319 152 aa14.85□□□□□ -0.03
LIN54-206ENST00000506560 KIF6Q6ZMV9 814 aa14.85□□□□□ -0.03
LIN54-206ENST00000506560 NGLY1Q96IV0 654 aa14.85□□□□□ -0.03
LIN54-206ENST00000506560 LRP6O75581 1613 aa14.85□□□□□ -0.03
LIN54-206ENST00000506560 COL15A1P39059 1388 aa14.85□□□□□ -0.03
LIN54-206ENST00000506560 MAP3K15Q6ZN16 1313 aa14.85□□□□□ -0.03
LIN54-206ENST00000506560 ITPK1Q13572 414 aa14.85□□□□□ -0.03
LIN54-206ENST00000506560 FAM227BQ96M60 508 aa14.85□□□□□ -0.03
LIN54-206ENST00000506560 TEX13AQ9BXU3 409 aaPredicted RBP14.85□□□□□ -0.03
LIN54-206ENST00000506560 NOL8Q76FK4 1167 aaKnown RBP14.84□□□□□ -0.03
LIN54-206ENST00000506560 UPF3BQ9BZI7 483 aaKnown RBP14.84□□□□□ -0.03
LIN54-206ENST00000506560 GIGYF2Q6Y7W6 1299 aaKnown RBP14.84□□□□□ -0.03
LIN54-206ENST00000506560 SMIM5Q71RC9 77 aa14.84□□□□□ -0.03
LIN54-206ENST00000506560 THRAP3Q9Y2W1 955 aaKnown RBP14.84□□□□□ -0.03
LIN54-206ENST00000506560 BCL9LQ86UU0 1499 aa14.83□□□□□ -0.03
LIN54-206ENST00000506560 TIMM10P62072 90 aa14.83□□□□□ -0.04
LIN54-206ENST00000506560 PTH1RQ03431 593 aa14.83□□□□□ -0.04
LIN54-206ENST00000506560 LSG1Q9H089 658 aaKnown RBP14.83□□□□□ -0.04
LIN54-206ENST00000506560 EP400Q96L91 3159 aa14.83□□□□□ -0.04
LIN54-206ENST00000506560 MYH14Q7Z406 1995 aaKnown RBP14.83□□□□□ -0.04
LIN54-206ENST00000506560 ATP6V1AP38606 617 aa14.83□□□□□ -0.04
LIN54-206ENST00000506560 NEK4P51957 841 aa14.83□□□□□ -0.04
LIN54-206ENST00000506560 HSP90AA1P07900 732 aaKnown RBP14.82□□□□□ -0.04
LIN54-206ENST00000506560 RASEFQ8IZ41 740 aa14.82□□□□□ -0.04
LIN54-206ENST00000506560 GPATCH3Q96I76 525 aa14.82□□□□□ -0.04
LIN54-206ENST00000506560 CHMP5Q9NZZ3 219 aa14.82□□□□□ -0.04
LIN54-206ENST00000506560 INTS5Q6P9B9 1019 aaKnown RBP14.82□□□□□ -0.04
LIN54-206ENST00000506560 CDCA7Q9BWT1 371 aaPredicted RBP14.82□□□□□ -0.04
LIN54-206ENST00000506560 UBN2Q6ZU65 1347 aa14.82□□□□□ -0.04
LIN54-206ENST00000506560 LOC102724428A0A0B4J2F2 783 aa14.81□□□□□ -0.04
LIN54-206ENST00000506560 SIK1P57059 783 aa14.81□□□□□ -0.04
LIN54-206ENST00000506560 SLFNL1Q499Z3 407 aa14.81□□□□□ -0.04
LIN54-206ENST00000506560 BARGINQ6ZT62 677 aa14.81□□□□□ -0.04
LIN54-206ENST00000506560 NLRP10Q86W26 655 aa14.81□□□□□ -0.04
LIN54-206ENST00000506560 DZIP3Q86Y13 1208 aaKnown RBP14.81□□□□□ -0.04
LIN54-206ENST00000506560 ZGPATQ8N5A5 531 aaKnown RBP14.81□□□□□ -0.04
LIN54-206ENST00000506560 DIAPH3Q9NSV4 1193 aa14.81□□□□□ -0.04
LIN54-206ENST00000506560 A0A0D9SFI3 127 aa14.81□□□□□ -0.04
LIN54-206ENST00000506560 FAM177BA6PVY3 158 aa14.81□□□□□ -0.04
LIN54-206ENST00000506560 NMIQ13287 307 aaPredicted RBP14.81□□□□□ -0.04
LIN54-206ENST00000506560 COL9A3Q14050 684 aaPredicted RBP14.81□□□□□ -0.04
LIN54-206ENST00000506560 NUP98P52948 1817 aa14.8□□□□□ -0.04
LIN54-206ENST00000506560 CRKLP46109 303 aaKnown RBP14.8□□□□□ -0.04
LIN54-206ENST00000506560 EVI5LQ96CN4 794 aa14.8□□□□□ -0.04
LIN54-206ENST00000506560 NEUROD6Q96NK8 337 aa14.8□□□□□ -0.04
LIN54-206ENST00000506560 NWD2Q9ULI1 1742 aa14.8□□□□□ -0.04
LIN54-206ENST00000506560 RAD50Q92878 1312 aa14.8□□□□□ -0.04
LIN54-206ENST00000506560 CPA1P15085 419 aa14.8□□□□□ -0.04
LIN54-206ENST00000506560 HSPA4P34932 840 aa14.8□□□□□ -0.04
LIN54-206ENST00000506560 PCCAP05165 728 aaPredicted RBP14.79□□□□□ -0.04
LIN54-206ENST00000506560 TRIM28Q13263 835 aaKnown RBP14.79□□□□□ -0.04
LIN54-206ENST00000506560 PKP1Q13835 747 aa14.79□□□□□ -0.04
LIN54-206ENST00000506560 DNAJC2Q99543 621 aaKnown RBP14.79□□□□□ -0.04
LIN54-206ENST00000506560 LARP6Q9BRS8 491 aaKnown RBP14.79□□□□□ -0.04
LIN54-206ENST00000506560 FSD1Q9BTV5 496 aa14.79□□□□□ -0.04
LIN54-206ENST00000506560 ZBTB38Q8NAP3 1195 aaPredicted RBP14.79□□□□□ -0.04
LIN54-206ENST00000506560 PALLDQ8WX93 1383 aa14.79□□□□□ -0.04
LIN54-206ENST00000506560 EYA2O00167 538 aa14.79□□□□□ -0.04
LIN54-206ENST00000506560 ZNF589Q86UQ0 364 aaPredicted RBP14.79□□□□□ -0.04
LIN54-206ENST00000506560 DTNBO60941 627 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms