RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 SUSD4Q5VX71 490 aa17.63■□□□□ 0.41
SERF1B-204ENST00000506542 B4GALNT3Q6L9W6 998 aa17.63■□□□□ 0.41
SERF1B-204ENST00000506542 C2CD5Q86YS7 1000 aa17.63■□□□□ 0.41
SERF1B-204ENST00000506542 ATP10DQ9P241 1426 aa17.63■□□□□ 0.41
SERF1B-204ENST00000506542 IPO8O15397 1037 aaKnown RBP17.62■□□□□ 0.41
SERF1B-204ENST00000506542 MS4A1P11836 297 aa17.62■□□□□ 0.41
SERF1B-204ENST00000506542 ZNF34Q8IZ26 560 aa17.62■□□□□ 0.41
SERF1B-204ENST00000506542 PANK1Q8TE04 598 aa17.62■□□□□ 0.41
SERF1B-204ENST00000506542 NOB1Q9ULX3 412 aaKnown RBP17.62■□□□□ 0.41
SERF1B-204ENST00000506542 ERFEQ4G0M1 354 aa17.61■□□□□ 0.41
SERF1B-204ENST00000506542 ATF7IPQ6VMQ6 1270 aa17.61■□□□□ 0.41
SERF1B-204ENST00000506542 G2E3Q7L622 706 aa17.61■□□□□ 0.41
SERF1B-204ENST00000506542 SYNE4Q8N205 404 aa17.61■□□□□ 0.41
SERF1B-204ENST00000506542 ARFGEF1Q9Y6D6 1849 aa17.61■□□□□ 0.41
SERF1B-204ENST00000506542 RLBP1P12271 317 aa17.61■□□□□ 0.41
SERF1B-204ENST00000506542 TRIM27P14373 513 aa17.61■□□□□ 0.41
SERF1B-204ENST00000506542 CCDC136Q96JN2 1154 aa17.61■□□□□ 0.41
SERF1B-204ENST00000506542 TNNQ9UQP3 1299 aa17.61■□□□□ 0.41
SERF1B-204ENST00000506542 ATP5J2-PTCD1G3V325 749 aa17.6■□□□□ 0.41
SERF1B-204ENST00000506542 DZIP1LQ8IYY4 767 aaKnown RBP17.6■□□□□ 0.41
SERF1B-204ENST00000506542 ARHGAP45Q92619 1136 aa17.6■□□□□ 0.41
SERF1B-204ENST00000506542 BRIP1Q9BX63 1249 aa17.6■□□□□ 0.41
SERF1B-204ENST00000506542 HYPKQ9NX55 129 aa17.6■□□□□ 0.41
SERF1B-204ENST00000506542 PIM2Q9P1W9 311 aa17.6■□□□□ 0.41
SERF1B-204ENST00000506542 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
SERF1B-204ENST00000506542 SLX4Q8IY92 1834 aa17.59■□□□□ 0.41
SERF1B-204ENST00000506542 YY1P25490 414 aa17.59■□□□□ 0.41
SERF1B-204ENST00000506542 ST5P78524 1137 aa17.59■□□□□ 0.41
SERF1B-204ENST00000506542 CCDC30Q5VVM6 783 aa17.59■□□□□ 0.41
SERF1B-204ENST00000506542 ANKRD13DQ6ZTN6 518 aa17.59■□□□□ 0.41
SERF1B-204ENST00000506542 C3orf67Q6ZVT6 689 aa17.59■□□□□ 0.41
SERF1B-204ENST00000506542 SLC51AQ86UW1 340 aa17.59■□□□□ 0.41
SERF1B-204ENST00000506542 ZNF622Q969S3 477 aaKnown RBP eCLIP17.59■□□□□ 0.41
SERF1B-204ENST00000506542 COG6Q9Y2V7 657 aa17.59■□□□□ 0.41
SERF1B-204ENST00000506542 NTSR2O95665 410 aa17.58■□□□□ 0.41
SERF1B-204ENST00000506542 TPTE2Q6XPS3 522 aa17.58■□□□□ 0.41
SERF1B-204ENST00000506542 FTSJ3Q8IY81 847 aaKnown RBP17.58■□□□□ 0.41
SERF1B-204ENST00000506542 CLUAP1Q96AJ1 413 aa17.58■□□□□ 0.41
SERF1B-204ENST00000506542 H0YIN7 160 aa17.58■□□□□ 0.4
SERF1B-204ENST00000506542 GTF2E1P29083 439 aaPredicted RBP17.58■□□□□ 0.4
SERF1B-204ENST00000506542 DALRD3Q5D0E6 543 aaKnown RBP17.58■□□□□ 0.4
SERF1B-204ENST00000506542 PLBD2Q8NHP8 589 aa17.58■□□□□ 0.4
SERF1B-204ENST00000506542 TCIRG1Q13488 830 aa17.57■□□□□ 0.4
SERF1B-204ENST00000506542 RTL5Q5HYW3 569 aaPredicted RBP17.57■□□□□ 0.4
SERF1B-204ENST00000506542 NLRP10Q86W26 655 aa17.57■□□□□ 0.4
SERF1B-204ENST00000506542 LAMB2P55268 1798 aa17.56■□□□□ 0.4
SERF1B-204ENST00000506542 RGL2O15211 777 aa17.56■□□□□ 0.4
SERF1B-204ENST00000506542 GRIN3BO60391 1043 aa17.56■□□□□ 0.4
SERF1B-204ENST00000506542 SLC4A2P04920 1241 aa17.56■□□□□ 0.4
SERF1B-204ENST00000506542 PDE6BP35913 854 aa17.56■□□□□ 0.4
SERF1B-204ENST00000506542 MVPQ14764 893 aaKnown RBP17.56■□□□□ 0.4
SERF1B-204ENST00000506542 ARHGAP27Q6ZUM4 889 aa17.56■□□□□ 0.4
SERF1B-204ENST00000506542 TAF1P21675 1872 aa17.56■□□□□ 0.4
SERF1B-204ENST00000506542 SRGNP10124 158 aa17.55■□□□□ 0.4
SERF1B-204ENST00000506542 AAMPQ13685 434 aa17.55■□□□□ 0.4
SERF1B-204ENST00000506542 RIC3Q7Z5B4 369 aa17.55■□□□□ 0.4
SERF1B-204ENST00000506542 JARID2Q92833 1246 aaPredicted RBP17.55■□□□□ 0.4
SERF1B-204ENST00000506542 ADCY9O60503 1353 aa17.55■□□□□ 0.4
SERF1B-204ENST00000506542 OLFM4Q6UX06 510 aa17.55■□□□□ 0.4
SERF1B-204ENST00000506542 MYD88Q99836 296 aa17.55■□□□□ 0.4
SERF1B-204ENST00000506542 STK31Q9BXU1 1019 aa17.55■□□□□ 0.4
SERF1B-204ENST00000506542 HCLS1P14317 486 aaPredicted RBP17.54■□□□□ 0.4
SERF1B-204ENST00000506542 TTLL6Q8N841 843 aa17.54■□□□□ 0.4
SERF1B-204ENST00000506542 DDX60Q8IY21 1712 aaKnown RBP17.54■□□□□ 0.4
SERF1B-204ENST00000506542 PI4KAP2A4QPH2 592 aa17.53■□□□□ 0.4
SERF1B-204ENST00000506542 RASSF7Q02833 373 aa17.53■□□□□ 0.4
SERF1B-204ENST00000506542 PI4KAP1Q8N8J0 262 aa17.53■□□□□ 0.4
SERF1B-204ENST00000506542 ISCA1Q9BUE6 129 aa17.53■□□□□ 0.4
SERF1B-204ENST00000506542 UTP14AQ9BVJ6 771 aaKnown RBP17.53■□□□□ 0.4
SERF1B-204ENST00000506542 API5Q9BZZ5 524 aaKnown RBP17.53■□□□□ 0.4
SERF1B-204ENST00000506542 NYXQ9GZU5 481 aa17.53■□□□□ 0.4
SERF1B-204ENST00000506542 MAP3K2Q9Y2U5 619 aa17.53■□□□□ 0.4
SERF1B-204ENST00000506542 ABCC4O15439 1325 aa17.53■□□□□ 0.4
SERF1B-204ENST00000506542 PTPRCP08575 1304 aa17.53■□□□□ 0.4
SERF1B-204ENST00000506542 CCDC88AQ3V6T2 1871 aa17.53■□□□□ 0.4
SERF1B-204ENST00000506542 C21orf2O43822 256 aa17.52■□□□□ 0.4
SERF1B-204ENST00000506542 PARP10Q53GL7 1025 aa17.52■□□□□ 0.4
SERF1B-204ENST00000506542 TMEM57Q8N5G2 664 aa17.52■□□□□ 0.4
SERF1B-204ENST00000506542 FAM89AQ96GI7 184 aa17.52■□□□□ 0.4
SERF1B-204ENST00000506542 CHMP4AQ9BY43 222 aa17.52■□□□□ 0.4
SERF1B-204ENST00000506542 TRMT112Q9UI30 125 aaKnown RBP17.52■□□□□ 0.4
SERF1B-204ENST00000506542 SBF1O95248 1867 aa17.52■□□□□ 0.39
SERF1B-204ENST00000506542 PRPF40BQ6NWY9 871 aaKnown RBP17.52■□□□□ 0.39
SERF1B-204ENST00000506542 PPP1R42Q7Z4L9 355 aa17.52■□□□□ 0.39
SERF1B-204ENST00000506542 DDX19BQ9UMR2 479 aa17.52■□□□□ 0.39
SERF1B-204ENST00000506542 COL4A1P02462 1669 aa17.51■□□□□ 0.39
SERF1B-204ENST00000506542 KLRG2A4D1S0 409 aaPredicted RBP17.51■□□□□ 0.39
SERF1B-204ENST00000506542 PRELPP51888 382 aa17.51■□□□□ 0.39
SERF1B-204ENST00000506542 FLIIQ13045 1269 aa17.51■□□□□ 0.39
SERF1B-204ENST00000506542 HSP90AB3PQ58FF7 597 aa17.51■□□□□ 0.39
SERF1B-204ENST00000506542 MASTLQ96GX5 879 aa17.51■□□□□ 0.39
SERF1B-204ENST00000506542 IBTKQ9P2D0 1353 aaPredicted RBP17.5■□□□□ 0.39
SERF1B-204ENST00000506542 ITPRIPQ8IWB1 547 aa17.5■□□□□ 0.39
SERF1B-204ENST00000506542 F6X3S4 739 aa17.49■□□□□ 0.39
SERF1B-204ENST00000506542 IGKV5-2P06315 115 aa17.49■□□□□ 0.39
SERF1B-204ENST00000506542 CWF19L2Q2TBE0 894 aaKnown RBP17.49■□□□□ 0.39
SERF1B-204ENST00000506542 STYK1Q6J9G0 422 aa17.49■□□□□ 0.39
SERF1B-204ENST00000506542 KSR2Q6VAB6 950 aa17.49■□□□□ 0.39
SERF1B-204ENST00000506542 METTL22Q9BUU2 404 aaPredicted RBP17.49■□□□□ 0.39
SERF1B-204ENST00000506542 FER1L6Q2WGJ9 1857 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms