RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 MAFBQ9Y5Q3 323 aaPredicted RBP9.24□□□□□ -0.93
SMAD5-201ENST00000506223 SHANK3Q9BYB0 1731 aa9.24□□□□□ -0.93
SMAD5-201ENST00000506223 SPATA31A1Q5TZJ5 1347 aa9.24□□□□□ -0.93
SMAD5-201ENST00000506223 RGPD3A6NKT7 1758 aaPredicted RBP9.24□□□□□ -0.93
SMAD5-201ENST00000506223 RGPD4Q7Z3J3 1758 aa9.24□□□□□ -0.93
SMAD5-201ENST00000506223 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.23□□□□□ -0.93
SMAD5-201ENST00000506223 PIK3CDO00329 1044 aa9.23□□□□□ -0.93
SMAD5-201ENST00000506223 ATP9BO43861 1147 aa9.23□□□□□ -0.93
SMAD5-201ENST00000506223 MCCD1P59942 119 aaPredicted RBP9.23□□□□□ -0.93
SMAD5-201ENST00000506223 AGERQ15109 404 aa9.23□□□□□ -0.93
SMAD5-201ENST00000506223 RGL3Q3MIN7 710 aa9.23□□□□□ -0.93
SMAD5-201ENST00000506223 BPHLQ86WA6 291 aaPredicted RBP9.23□□□□□ -0.93
SMAD5-201ENST00000506223 ANKLE1Q8NAG6 615 aa9.23□□□□□ -0.93
SMAD5-201ENST00000506223 FOXJ1Q92949 421 aa9.23□□□□□ -0.93
SMAD5-201ENST00000506223 MPHOSPH9Q99550 1183 aa9.23□□□□□ -0.93
SMAD5-201ENST00000506223 SYT17Q9BSW7 474 aa9.23□□□□□ -0.93
SMAD5-201ENST00000506223 GOLGB1Q14789 3259 aaKnown RBP9.23□□□□□ -0.93
SMAD5-201ENST00000506223 ZBTB24O43167 697 aaPredicted RBP9.22□□□□□ -0.93
SMAD5-201ENST00000506223 CEP126Q9P2H0 1117 aa9.22□□□□□ -0.93
SMAD5-201ENST00000506223 RPGRIP1LQ68CZ1 1315 aa9.22□□□□□ -0.93
SMAD5-201ENST00000506223 DLC1Q96QB1 1528 aa9.21□□□□□ -0.93
SMAD5-201ENST00000506223 PLA2G2CQ5R387 149 aa9.21□□□□□ -0.94
SMAD5-201ENST00000506223 PPP1R18Q6NYC8 613 aa9.21□□□□□ -0.94
SMAD5-201ENST00000506223 NFATC2IPQ8NCF5 419 aa9.21□□□□□ -0.94
SMAD5-201ENST00000506223 PEAK1Q9H792 1746 aa9.2□□□□□ -0.94
SMAD5-201ENST00000506223 PDIA4P13667 645 aaKnown RBP9.2□□□□□ -0.94
SMAD5-201ENST00000506223 SH3BP2P78314 561 aa9.2□□□□□ -0.94
SMAD5-201ENST00000506223 SRPK2P78362 688 aaKnown RBP9.2□□□□□ -0.94
SMAD5-201ENST00000506223 PDE3BQ13370 1112 aa9.2□□□□□ -0.94
SMAD5-201ENST00000506223 SLFNL1Q499Z3 407 aa9.2□□□□□ -0.94
SMAD5-201ENST00000506223 ERFEQ4G0M1 354 aa9.2□□□□□ -0.94
SMAD5-201ENST00000506223 C4orf48Q5BLP8 95 aa9.2□□□□□ -0.94
SMAD5-201ENST00000506223 DZIP3Q86Y13 1208 aaKnown RBP9.2□□□□□ -0.94
SMAD5-201ENST00000506223 RETREG2Q8NC44 543 aa9.2□□□□□ -0.94
SMAD5-201ENST00000506223 FAM174AQ8TBP5 190 aa9.2□□□□□ -0.94
SMAD5-201ENST00000506223 PMFBP1Q8TBY8 1022 aa9.2□□□□□ -0.94
SMAD5-201ENST00000506223 STRN4Q9NRL3 753 aa9.2□□□□□ -0.94
SMAD5-201ENST00000506223 USP35Q9P2H5 1018 aa9.2□□□□□ -0.94
SMAD5-201ENST00000506223 SKIP12755 728 aa9.19□□□□□ -0.94
SMAD5-201ENST00000506223 TRIM32Q13049 653 aa9.19□□□□□ -0.94
SMAD5-201ENST00000506223 MMRN1Q13201 1228 aa9.19□□□□□ -0.94
SMAD5-201ENST00000506223 CHRNA2Q15822 529 aa9.19□□□□□ -0.94
SMAD5-201ENST00000506223 TMEM132EQ6IEE7 984 aa9.19□□□□□ -0.94
SMAD5-201ENST00000506223 PRDM11Q9NQV5 511 aa9.19□□□□□ -0.94
SMAD5-201ENST00000506223 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.19□□□□□ -0.94
SMAD5-201ENST00000506223 ABCC11Q96J66 1382 aa9.19□□□□□ -0.94
SMAD5-201ENST00000506223 RAB3GAP2Q9H2M9 1393 aa9.19□□□□□ -0.94
SMAD5-201ENST00000506223 PHRF1Q9P1Y6 1649 aaKnown RBP9.19□□□□□ -0.94
SMAD5-201ENST00000506223 PARP4Q9UKK3 1724 aaKnown RBP9.19□□□□□ -0.94
SMAD5-201ENST00000506223 RNF135Q8IUD6 432 aa9.18□□□□□ -0.94
SMAD5-201ENST00000506223 ADGRF5Q8IZF2 1346 aa9.18□□□□□ -0.94
SMAD5-201ENST00000506223 SLC10A4Q96EP9 437 aa9.18□□□□□ -0.94
SMAD5-201ENST00000506223 C1QTNF2Q9BXJ5 285 aa9.18□□□□□ -0.94
SMAD5-201ENST00000506223 KIAA0232Q92628 1395 aa9.17□□□□□ -0.94
SMAD5-201ENST00000506223 ANKRD30BQ9BXX2 1392 aa9.17□□□□□ -0.94
SMAD5-201ENST00000506223 USP17L3A6NCW0 530 aa9.17□□□□□ -0.94
SMAD5-201ENST00000506223 USP17L4A6NCW7 530 aa9.17□□□□□ -0.94
SMAD5-201ENST00000506223 USP17L5A8MUK1 530 aa9.17□□□□□ -0.94
SMAD5-201ENST00000506223 USP17L2Q6R6M4 530 aa9.17□□□□□ -0.94
SMAD5-201ENST00000506223 PTF1AQ7RTS3 328 aa9.17□□□□□ -0.94
SMAD5-201ENST00000506223 USP17L1Q7RTZ2 530 aa9.17□□□□□ -0.94
SMAD5-201ENST00000506223 YTHDC2Q9H6S0 1430 aaKnown RBP9.16□□□□□ -0.94
SMAD5-201ENST00000506223 CDCA8Q53HL2 280 aa9.16□□□□□ -0.94
SMAD5-201ENST00000506223 PHTF2Q8N3S3 785 aa9.16□□□□□ -0.94
SMAD5-201ENST00000506223 SSH2Q76I76 1423 aa9.15□□□□□ -0.94
SMAD5-201ENST00000506223 PLSCR1O15162 318 aa9.15□□□□□ -0.94
SMAD5-201ENST00000506223 RPIAP49247 311 aa9.15□□□□□ -0.94
SMAD5-201ENST00000506223 WNT7BP56706 349 aa9.15□□□□□ -0.94
SMAD5-201ENST00000506223 SKOR1P84550 965 aa9.15□□□□□ -0.94
SMAD5-201ENST00000506223 GPR162Q16538 588 aa9.15□□□□□ -0.94
SMAD5-201ENST00000506223 PLEKHM2Q8IWE5 1019 aa9.15□□□□□ -0.94
SMAD5-201ENST00000506223 DEPDC4Q8N2C3 294 aa9.15□□□□□ -0.94
SMAD5-201ENST00000506223 PLPP7Q8NBV4 271 aa9.15□□□□□ -0.94
SMAD5-201ENST00000506223 SAFB2Q14151 953 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMAD5-201ENST00000506223 LARP1Q6PKG0 1096 aaKnown RBP9.14□□□□□ -0.95
SMAD5-201ENST00000506223 TRMT44Q8IYL2 757 aaKnown RBP9.14□□□□□ -0.95
SMAD5-201ENST00000506223 VRTNQ9H8Y1 702 aa9.14□□□□□ -0.95
SMAD5-201ENST00000506223 LMO7Q8WWI1 1683 aa9.13□□□□□ -0.95
SMAD5-201ENST00000506223 MAP3K5Q99683 1374 aa9.13□□□□□ -0.95
SMAD5-201ENST00000506223 LRRC37A3O60309 1634 aa9.13□□□□□ -0.95
SMAD5-201ENST00000506223 HSPA6P17066 643 aa9.13□□□□□ -0.95
SMAD5-201ENST00000506223 ZC3H6P61129 1189 aaKnown RBP9.13□□□□□ -0.95
SMAD5-201ENST00000506223 NBPF20Q3BBV1 942 aa9.13□□□□□ -0.95
SMAD5-201ENST00000506223 TCP11L2Q8N4U5 519 aa9.13□□□□□ -0.95
SMAD5-201ENST00000506223 TRAIPQ9BWF2 469 aa9.13□□□□□ -0.95
SMAD5-201ENST00000506223 MTFR1LQ9H019 292 aa9.13□□□□□ -0.95
SMAD5-201ENST00000506223 OVOS2A0A0G2JMS6 1433 aa9.13□□□□□ -0.95
SMAD5-201ENST00000506223 OVOS2A0A0J9YW53 1432 aa9.13□□□□□ -0.95
SMAD5-201ENST00000506223 OVOS2Q6IE36 1432 aa9.13□□□□□ -0.95
SMAD5-201ENST00000506223 ANKARQ7Z5J8 1434 aa9.13□□□□□ -0.95
SMAD5-201ENST00000506223 GPRASP1Q5JY77 1395 aa9.12□□□□□ -0.95
SMAD5-201ENST00000506223 AKAP12Q02952 1782 aa9.12□□□□□ -0.95
SMAD5-201ENST00000506223 ATG7O95352 703 aa9.12□□□□□ -0.95
SMAD5-201ENST00000506223 CD2BP2O95400 341 aaKnown RBP9.12□□□□□ -0.95
SMAD5-201ENST00000506223 CSB-PGBD3P0DP91 1061 aa9.12□□□□□ -0.95
SMAD5-201ENST00000506223 VARSP26640 1264 aaKnown RBP9.12□□□□□ -0.95
SMAD5-201ENST00000506223 EVA1CP58658 441 aa9.12□□□□□ -0.95
SMAD5-201ENST00000506223 NCOA4Q13772 614 aa9.12□□□□□ -0.95
SMAD5-201ENST00000506223 SLC15A2Q16348 729 aa9.12□□□□□ -0.95
SMAD5-201ENST00000506223 MAP7D1Q3KQU3 841 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms