RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 ANKRD31Q8N7Z5 1873 aa11.19□□□□□ -0.62
CTSB-205ENST00000505496 PI4KAP2A4QPH2 592 aa11.18□□□□□ -0.62
CTSB-205ENST00000505496 FAM177BA6PVY3 158 aa11.18□□□□□ -0.62
CTSB-205ENST00000505496 TCERG1O14776 1098 aaKnown RBP11.18□□□□□ -0.62
CTSB-205ENST00000505496 NPR1P16066 1061 aa11.18□□□□□ -0.62
CTSB-205ENST00000505496 HOXA10P31260 410 aaPredicted RBP11.18□□□□□ -0.62
CTSB-205ENST00000505496 FLIIQ13045 1269 aa11.18□□□□□ -0.62
CTSB-205ENST00000505496 RIC3Q7Z5B4 369 aa11.18□□□□□ -0.62
CTSB-205ENST00000505496 PI4KAP1Q8N8J0 262 aa11.18□□□□□ -0.62
CTSB-205ENST00000505496 CNKSR1Q969H4 720 aa11.18□□□□□ -0.62
CTSB-205ENST00000505496 ZNF428Q96B54 188 aa11.18□□□□□ -0.62
CTSB-205ENST00000505496 METTL22Q9BUU2 404 aaPredicted RBP11.18□□□□□ -0.62
CTSB-205ENST00000505496 WWC3Q9ULE0 1092 aa11.18□□□□□ -0.62
CTSB-205ENST00000505496 SH3TC1Q8TE82 1336 aa11.17□□□□□ -0.62
CTSB-205ENST00000505496 CT47B1P0C2W7 299 aaPredicted RBP11.17□□□□□ -0.62
CTSB-205ENST00000505496 GTF2E1P29083 439 aaPredicted RBP11.17□□□□□ -0.62
CTSB-205ENST00000505496 CCDC191Q8NCU4 936 aa11.17□□□□□ -0.62
CTSB-205ENST00000505496 C7orf43Q8WVR3 580 aa11.17□□□□□ -0.62
CTSB-205ENST00000505496 TRMT112Q9UI30 125 aaKnown RBP11.17□□□□□ -0.62
CTSB-205ENST00000505496 DLEC1Q9Y238 1755 aa11.17□□□□□ -0.62
CTSB-205ENST00000505496 COL11A2P13942 1736 aaPredicted RBP11.16□□□□□ -0.62
CTSB-205ENST00000505496 ATP5J2-PTCD1G3V325 749 aa11.16□□□□□ -0.62
CTSB-205ENST00000505496 IGKV5-2P06315 115 aa11.16□□□□□ -0.62
CTSB-205ENST00000505496 C3orf67Q6ZVT6 689 aa11.16□□□□□ -0.62
CTSB-205ENST00000505496 ZNF622Q969S3 477 aaKnown RBP eCLIP11.16□□□□□ -0.62
CTSB-205ENST00000505496 MAP3K2Q9Y2U5 619 aa11.16□□□□□ -0.62
CTSB-205ENST00000505496 YY1P25490 414 aa11.15□□□□□ -0.62
CTSB-205ENST00000505496 PRPF40BQ6NWY9 871 aaKnown RBP11.15□□□□□ -0.62
CTSB-205ENST00000505496 SYNE4Q8N205 404 aa11.15□□□□□ -0.62
CTSB-205ENST00000505496 ZBTB38Q8NAP3 1195 aaPredicted RBP11.15□□□□□ -0.62
CTSB-205ENST00000505496 NLRP3Q96P20 1036 aa11.15□□□□□ -0.62
CTSB-205ENST00000505496 MYD88Q99836 296 aa11.15□□□□□ -0.62
CTSB-205ENST00000505496 TNRC6CQ9HCJ0 1690 aaKnown RBP11.14□□□□□ -0.63
CTSB-205ENST00000505496 ARFGEF1Q9Y6D6 1849 aa11.14□□□□□ -0.63
CTSB-205ENST00000505496 ANKRD36CQ5JPF3 1778 aa11.14□□□□□ -0.63
CTSB-205ENST00000505496 ARFGEF2Q9Y6D5 1785 aa11.14□□□□□ -0.63
CTSB-205ENST00000505496 PCCAP05165 728 aaPredicted RBP11.14□□□□□ -0.63
CTSB-205ENST00000505496 HCLS1P14317 486 aaPredicted RBP11.14□□□□□ -0.63
CTSB-205ENST00000505496 ALDH1B1P30837 517 aa11.14□□□□□ -0.63
CTSB-205ENST00000505496 HNRNPUQ00839 825 aaKnown RBP eCLIP11.14□□□□□ -0.63
CTSB-205ENST00000505496 FKBP5Q13451 457 aaPredicted RBP11.14□□□□□ -0.63
CTSB-205ENST00000505496 ALDH1L2Q3SY69 923 aa11.14□□□□□ -0.63
CTSB-205ENST00000505496 MRPL50Q8N5N7 158 aaKnown RBP11.14□□□□□ -0.63
CTSB-205ENST00000505496 DNAAF4Q8WXU2 420 aa11.14□□□□□ -0.63
CTSB-205ENST00000505496 FAM89AQ96GI7 184 aa11.14□□□□□ -0.63
CTSB-205ENST00000505496 CRAMP1Q96RY5 1269 aa11.14□□□□□ -0.63
CTSB-205ENST00000505496 CWC25Q9NXE8 425 aaPredicted RBP11.14□□□□□ -0.63
CTSB-205ENST00000505496 ZBED9Q6R2W3 1325 aa11.13□□□□□ -0.63
CTSB-205ENST00000505496 NEURL1BA8MQ27 555 aa11.13□□□□□ -0.63
CTSB-205ENST00000505496 BRPF1P55201 1214 aaPredicted RBP11.13□□□□□ -0.63
CTSB-205ENST00000505496 NEXNQ0ZGT2 675 aa11.13□□□□□ -0.63
CTSB-205ENST00000505496 SF3B3Q15393 1217 aaKnown RBP11.13□□□□□ -0.63
CTSB-205ENST00000505496 SOGA3Q5TF21 947 aa11.13□□□□□ -0.63
CTSB-205ENST00000505496 ARHGAP27Q6ZUM4 889 aa11.13□□□□□ -0.63
CTSB-205ENST00000505496 LINS1Q8NG48 757 aa11.13□□□□□ -0.63
CTSB-205ENST00000505496 SSH1Q8WYL5 1049 aa11.13□□□□□ -0.63
CTSB-205ENST00000505496 CDHR2Q9BYE9 1310 aa11.12□□□□□ -0.63
CTSB-205ENST00000505496 LTBP3Q9NS15 1303 aa11.12□□□□□ -0.63
CTSB-205ENST00000505496 SNED1Q8TER0 1413 aa11.12□□□□□ -0.63
CTSB-205ENST00000505496 NFKBIEO00221 500 aa11.12□□□□□ -0.63
CTSB-205ENST00000505496 IRS4O14654 1257 aaPredicted RBP11.12□□□□□ -0.63
CTSB-205ENST00000505496 C21orf2O43822 256 aa11.12□□□□□ -0.63
CTSB-205ENST00000505496 BEND3Q5T5X7 828 aa11.12□□□□□ -0.63
CTSB-205ENST00000505496 RPGRQ92834 1020 aaKnown RBP11.12□□□□□ -0.63
CTSB-205ENST00000505496 RBM17Q96I25 401 aaKnown RBP11.12□□□□□ -0.63
CTSB-205ENST00000505496 CACNA1FO60840 1977 aa11.11□□□□□ -0.63
CTSB-205ENST00000505496 H7C1W4 665 aa11.11□□□□□ -0.63
CTSB-205ENST00000505496 HSP90B1P14625 803 aaKnown RBP11.11□□□□□ -0.63
CTSB-205ENST00000505496 PRELPP51888 382 aa11.11□□□□□ -0.63
CTSB-205ENST00000505496 GCKRQ14397 625 aa11.11□□□□□ -0.63
CTSB-205ENST00000505496 CWF19L2Q2TBE0 894 aaKnown RBP11.11□□□□□ -0.63
CTSB-205ENST00000505496 ABCC4O15439 1325 aa11.1□□□□□ -0.63
CTSB-205ENST00000505496 PTPRCP08575 1304 aa11.1□□□□□ -0.63
CTSB-205ENST00000505496 SLX4Q8IY92 1834 aa11.1□□□□□ -0.63
CTSB-205ENST00000505496 CHD4Q14839 1912 aa11.1□□□□□ -0.63
CTSB-205ENST00000505496 F6X3S4 739 aa11.1□□□□□ -0.63
CTSB-205ENST00000505496 CASP7P55210 303 aa11.1□□□□□ -0.63
CTSB-205ENST00000505496 CC2D2BQ6DHV5 1058 aa11.1□□□□□ -0.63
CTSB-205ENST00000505496 ZNF784Q8NCA9 323 aaPredicted RBP11.1□□□□□ -0.63
CTSB-205ENST00000505496 PLA2G12BQ9BX93 195 aa11.1□□□□□ -0.63
CTSB-205ENST00000505496 PDE8AO60658 829 aa11.09□□□□□ -0.63
CTSB-205ENST00000505496 BBOX1O75936 387 aa11.09□□□□□ -0.63
CTSB-205ENST00000505496 LMNB1P20700 586 aa11.09□□□□□ -0.63
CTSB-205ENST00000505496 RARSP54136 660 aaKnown RBP11.09□□□□□ -0.63
CTSB-205ENST00000505496 RASSF7Q02833 373 aa11.09□□□□□ -0.63
CTSB-205ENST00000505496 GRAPQ13588 217 aa11.09□□□□□ -0.63
CTSB-205ENST00000505496 GRIPAP1Q4V328 841 aa11.09□□□□□ -0.63
CTSB-205ENST00000505496 CCDC93Q567U6 631 aa11.09□□□□□ -0.63
CTSB-205ENST00000505496 RTL5Q5HYW3 569 aaPredicted RBP11.09□□□□□ -0.63
CTSB-205ENST00000505496 C9orf131Q5VYM1 1079 aa11.09□□□□□ -0.63
CTSB-205ENST00000505496 DDX46Q7L014 1031 aaKnown RBP11.09□□□□□ -0.63
CTSB-205ENST00000505496 RTKN2Q8IZC4 609 aa11.09□□□□□ -0.63
CTSB-205ENST00000505496 GRAPLQ8TC17 118 aaPredicted RBP11.09□□□□□ -0.63
CTSB-205ENST00000505496 ZC3H4Q9UPT8 1303 aaKnown RBP11.09□□□□□ -0.63
CTSB-205ENST00000505496 PPEF1O14829 653 aaPredicted RBP11.08□□□□□ -0.64
CTSB-205ENST00000505496 ALDH1L1O75891 902 aa11.08□□□□□ -0.64
CTSB-205ENST00000505496 OLFM4Q6UX06 510 aa11.08□□□□□ -0.64
CTSB-205ENST00000505496 TMC4Q7Z404 712 aa11.08□□□□□ -0.64
CTSB-205ENST00000505496 PSMD1Q99460 953 aa11.08□□□□□ -0.64
CTSB-205ENST00000505496 TAOK3Q9H2K8 898 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms