RNA–Protein interactions for RNA: ENST00000505108.1

TRAPPC13-207, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-207ENST00000505108 ARSDP51689 593 aa10.35□□□□□ -0.75
TRAPPC13-207ENST00000505108 ALKBH2Q6NS38 261 aa10.35□□□□□ -0.75
TRAPPC13-207ENST00000505108 RGL4Q8IZJ4 473 aa10.35□□□□□ -0.75
TRAPPC13-207ENST00000505108 RTCBQ9Y3I0 505 aaKnown RBP10.35□□□□□ -0.75
TRAPPC13-207ENST00000505108 DNM1Q05193 864 aaKnown RBP10.34□□□□□ -0.75
TRAPPC13-207ENST00000505108 AAMPQ13685 434 aa10.34□□□□□ -0.75
TRAPPC13-207ENST00000505108 EDEM1Q92611 657 aa10.34□□□□□ -0.75
TRAPPC13-207ENST00000505108 CD33P20138 364 aa10.33□□□□□ -0.76
TRAPPC13-207ENST00000505108 GAS6Q14393 721 aa10.33□□□□□ -0.76
TRAPPC13-207ENST00000505108 ATXN7L1Q9ULK2 861 aaPredicted RBP10.33□□□□□ -0.76
TRAPPC13-207ENST00000505108 POLIQ9UNA4 740 aa10.33□□□□□ -0.76
TRAPPC13-207ENST00000505108 PDGFAP04085 211 aa10.32□□□□□ -0.76
TRAPPC13-207ENST00000505108 VSIG8P0DPA2 414 aa10.32□□□□□ -0.76
TRAPPC13-207ENST00000505108 KCNQ4P56696 695 aa10.32□□□□□ -0.76
TRAPPC13-207ENST00000505108 NFX1Q12986 1120 aaKnown RBP10.32□□□□□ -0.76
TRAPPC13-207ENST00000505108 LCE2CQ5TA81 110 aa10.32□□□□□ -0.76
TRAPPC13-207ENST00000505108 CFHR5Q9BXR6 569 aa10.32□□□□□ -0.76
TRAPPC13-207ENST00000505108 KCNMB2Q9Y691 235 aa10.32□□□□□ -0.76
TRAPPC13-207ENST00000505108 MZF1P28698 734 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC13-207ENST00000505108 CTBSQ01459 385 aa10.31□□□□□ -0.76
TRAPPC13-207ENST00000505108 TRIP4Q15650 581 aaPredicted RBP10.31□□□□□ -0.76
TRAPPC13-207ENST00000505108 TMCO4Q5TGY1 634 aa10.31□□□□□ -0.76
TRAPPC13-207ENST00000505108 FOXR1Q6PIV2 292 aa10.31□□□□□ -0.76
TRAPPC13-207ENST00000505108 CMTR1Q8N1G2 835 aaKnown RBP10.31□□□□□ -0.76
TRAPPC13-207ENST00000505108 NUDT16Q96DE0 195 aaKnown RBP10.31□□□□□ -0.76
TRAPPC13-207ENST00000505108 TRERF1Q96PN7 1200 aa10.31□□□□□ -0.76
TRAPPC13-207ENST00000505108 KCNH4Q9UQ05 1017 aa10.31□□□□□ -0.76
TRAPPC13-207ENST00000505108 FGFR3P22607 806 aa10.3□□□□□ -0.76
TRAPPC13-207ENST00000505108 PIK3R5Q8WYR1 880 aa10.3□□□□□ -0.76
TRAPPC13-207ENST00000505108 GGNBP2Q9H3C7 697 aa10.3□□□□□ -0.76
TRAPPC13-207ENST00000505108 BRPF3Q9ULD4 1205 aa10.3□□□□□ -0.76
TRAPPC13-207ENST00000505108 MARSP56192 900 aaKnown RBP10.29□□□□□ -0.76
TRAPPC13-207ENST00000505108 LAMC2Q13753 1193 aa10.29□□□□□ -0.76
TRAPPC13-207ENST00000505108 RNFT1Q5M7Z0 435 aa10.29□□□□□ -0.76
TRAPPC13-207ENST00000505108 ZNF775Q96BV0 537 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC13-207ENST00000505108 PODXL2Q9NZ53 605 aa10.29□□□□□ -0.76
TRAPPC13-207ENST00000505108 MARK1Q9P0L2 795 aa10.29□□□□□ -0.76
TRAPPC13-207ENST00000505108 PHF24Q9UPV7 400 aa10.29□□□□□ -0.76
TRAPPC13-207ENST00000505108 A6NHS1 94 aa10.28□□□□□ -0.76
TRAPPC13-207ENST00000505108 C2CD2LO14523 706 aa10.28□□□□□ -0.76
TRAPPC13-207ENST00000505108 EPB42P16452 691 aa10.28□□□□□ -0.76
TRAPPC13-207ENST00000505108 MAPK1P28482 360 aa10.28□□□□□ -0.76
TRAPPC13-207ENST00000505108 CCDC27Q2M243 656 aa10.28□□□□□ -0.76
TRAPPC13-207ENST00000505108 SLC16A10Q8TF71 515 aa10.28□□□□□ -0.76
TRAPPC13-207ENST00000505108 SLC30A3Q99726 388 aa10.28□□□□□ -0.76
TRAPPC13-207ENST00000505108 FAM13BQ9NYF5 915 aa10.28□□□□□ -0.76
TRAPPC13-207ENST00000505108 DCTN4Q9UJW0 460 aa10.28□□□□□ -0.76
TRAPPC13-207ENST00000505108 NDUFB5O43674 189 aa10.27□□□□□ -0.77
TRAPPC13-207ENST00000505108 GJD3Q8N144 294 aa10.27□□□□□ -0.77
TRAPPC13-207ENST00000505108 COL25A1Q9BXS0 654 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC13-207ENST00000505108 XYLBO75191 536 aa10.26□□□□□ -0.77
TRAPPC13-207ENST00000505108 KRT76Q01546 638 aa10.26□□□□□ -0.77
TRAPPC13-207ENST00000505108 RAB44Q7Z6P3 723 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC13-207ENST00000505108 GSX2Q9BZM3 304 aa10.26□□□□□ -0.77
TRAPPC13-207ENST00000505108 UBAP1LF5GYI3 381 aa10.25□□□□□ -0.77
TRAPPC13-207ENST00000505108 IGHA2P01877 340 aa10.25□□□□□ -0.77
TRAPPC13-207ENST00000505108 MFAP1P55081 439 aaKnown RBP10.25□□□□□ -0.77
TRAPPC13-207ENST00000505108 SPEM2Q0P670 501 aa10.25□□□□□ -0.77
TRAPPC13-207ENST00000505108 C8orf34Q49A92 452 aa10.25□□□□□ -0.77
TRAPPC13-207ENST00000505108 FAM182BQ5T319 152 aa10.25□□□□□ -0.77
TRAPPC13-207ENST00000505108 DNAJC14Q6Y2X3 702 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC13-207ENST00000505108 IRF7Q92985 503 aa10.25□□□□□ -0.77
TRAPPC13-207ENST00000505108 RBCK1Q9BYM8 510 aa10.25□□□□□ -0.77
TRAPPC13-207ENST00000505108 EGFRP00533 1210 aa10.24□□□□□ -0.77
TRAPPC13-207ENST00000505108 MX2P20592 715 aa10.24□□□□□ -0.77
TRAPPC13-207ENST00000505108 TMC7Q7Z402 723 aa10.24□□□□□ -0.77
TRAPPC13-207ENST00000505108 SASH3O75995 380 aa10.23□□□□□ -0.77
TRAPPC13-207ENST00000505108 PCSK2P16519 638 aa10.23□□□□□ -0.77
TRAPPC13-207ENST00000505108 TARSP26639 723 aaKnown RBP10.23□□□□□ -0.77
TRAPPC13-207ENST00000505108 CCINQ13939 588 aa10.23□□□□□ -0.77
TRAPPC13-207ENST00000505108 KRT25Q7Z3Z0 450 aa10.23□□□□□ -0.77
TRAPPC13-207ENST00000505108 FAM129BQ96TA1 746 aa10.23□□□□□ -0.77
TRAPPC13-207ENST00000505108 GPR182O15218 404 aa10.22□□□□□ -0.77
TRAPPC13-207ENST00000505108 BMP4P12644 408 aa10.22□□□□□ -0.77
TRAPPC13-207ENST00000505108 USP5P45974 858 aa10.22□□□□□ -0.77
TRAPPC13-207ENST00000505108 CITED4Q96RK1 184 aa10.22□□□□□ -0.77
TRAPPC13-207ENST00000505108 C11orf16Q9NQ32 467 aa10.22□□□□□ -0.77
TRAPPC13-207ENST00000505108 ZFATQ9P243 1243 aa10.22□□□□□ -0.77
TRAPPC13-207ENST00000505108 WFS1O76024 890 aa10.21□□□□□ -0.77
TRAPPC13-207ENST00000505108 GMPRP36959 345 aa10.21□□□□□ -0.77
TRAPPC13-207ENST00000505108 TMC1Q8TDI8 760 aa10.21□□□□□ -0.77
TRAPPC13-207ENST00000505108 ASB16Q96NS5 453 aa10.21□□□□□ -0.77
TRAPPC13-207ENST00000505108 MBIPQ9NS73 344 aa10.21□□□□□ -0.77
TRAPPC13-207ENST00000505108 FNDC3AQ9Y2H6 1198 aaKnown RBP10.21□□□□□ -0.77
TRAPPC13-207ENST00000505108 RPLP1P05386 114 aaKnown RBP10.2□□□□□ -0.78
TRAPPC13-207ENST00000505108 NFKB1P19838 968 aa10.2□□□□□ -0.78
TRAPPC13-207ENST00000505108 LCE2AQ5TA79 106 aaPredicted RBP10.2□□□□□ -0.78
TRAPPC13-207ENST00000505108 BHMTQ93088 406 aa10.2□□□□□ -0.78
TRAPPC13-207ENST00000505108 CNTNAP3BQ96NU0 1288 aa10.2□□□□□ -0.78
TRAPPC13-207ENST00000505108 CNTNAP3Q9BZ76 1288 aa10.2□□□□□ -0.78
TRAPPC13-207ENST00000505108 ELP3Q9H9T3 547 aa10.2□□□□□ -0.78
TRAPPC13-207ENST00000505108 TMEM63CQ9P1W3 806 aa10.2□□□□□ -0.78
TRAPPC13-207ENST00000505108 KLF15Q9UIH9 416 aa10.2□□□□□ -0.78
TRAPPC13-207ENST00000505108 IGF1RP08069 1367 aa10.19□□□□□ -0.78
TRAPPC13-207ENST00000505108 ANKRD33BA6NCL7 494 aa10.19□□□□□ -0.78
TRAPPC13-207ENST00000505108 PDE12Q6L8Q7 609 aaKnown RBP10.19□□□□□ -0.78
TRAPPC13-207ENST00000505108 XKR5Q6UX68 686 aa10.19□□□□□ -0.78
TRAPPC13-207ENST00000505108 TREML4Q6UXN2 200 aa10.19□□□□□ -0.78
TRAPPC13-207ENST00000505108 ZNF438Q7Z4V0 828 aa10.19□□□□□ -0.78
TRAPPC13-207ENST00000505108 NLRP13Q86W25 1043 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms