RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 SDSP20132 328 aa16.14■□□□□ 0.17
CCSER1-205ENST00000505073 CDC45O75419 566 aa16.14■□□□□ 0.17
CCSER1-205ENST00000505073 MX1P20591 662 aa16.14■□□□□ 0.17
CCSER1-205ENST00000505073 KIF1BPQ96EK5 621 aa16.14■□□□□ 0.17
CCSER1-205ENST00000505073 OSBPL3Q9H4L5 887 aa16.14■□□□□ 0.17
CCSER1-205ENST00000505073 KCNQ2O43526 872 aa16.13■□□□□ 0.17
CCSER1-205ENST00000505073 ZBTB1Q9Y2K1 713 aa16.13■□□□□ 0.17
CCSER1-205ENST00000505073 MEX3CQ5U5Q3 659 aaKnown RBP16.13■□□□□ 0.17
CCSER1-205ENST00000505073 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.13■□□□□ 0.17
CCSER1-205ENST00000505073 CASP7P55210 303 aa16.12■□□□□ 0.17
CCSER1-205ENST00000505073 HSP90AB4PQ58FF6 505 aa16.12■□□□□ 0.17
CCSER1-205ENST00000505073 KLHDC4Q8TBB5 520 aa16.12■□□□□ 0.17
CCSER1-205ENST00000505073 PKNOX2Q96KN3 472 aa16.12■□□□□ 0.17
CCSER1-205ENST00000505073 CWC25Q9NXE8 425 aaPredicted RBP16.12■□□□□ 0.17
CCSER1-205ENST00000505073 SNX21Q969T3 373 aa16.12■□□□□ 0.17
CCSER1-205ENST00000505073 RBM25P49756 843 aaKnown RBP16.11■□□□□ 0.17
CCSER1-205ENST00000505073 KIF6Q6ZMV9 814 aa16.11■□□□□ 0.17
CCSER1-205ENST00000505073 SIL1Q9H173 461 aa16.11■□□□□ 0.17
CCSER1-205ENST00000505073 H7C1W4 665 aa16.11■□□□□ 0.17
CCSER1-205ENST00000505073 CIZ1Q9ULV3 898 aaPredicted RBP16.11■□□□□ 0.17
CCSER1-205ENST00000505073 TJP1Q07157 1748 aa16.1■□□□□ 0.17
CCSER1-205ENST00000505073 STAP2Q9UGK3 403 aa16.1■□□□□ 0.17
CCSER1-205ENST00000505073 ATP6V1AP38606 617 aa16.1■□□□□ 0.17
CCSER1-205ENST00000505073 TCIRG1Q13488 830 aa16.1■□□□□ 0.17
CCSER1-205ENST00000505073 CCDC191Q8NCU4 936 aa16.1■□□□□ 0.17
CCSER1-205ENST00000505073 TRIM44Q96DX7 344 aaPredicted RBP16.1■□□□□ 0.17
CCSER1-205ENST00000505073 LOC102724428A0A0B4J2F2 783 aa16.09■□□□□ 0.17
CCSER1-205ENST00000505073 SIK1P57059 783 aa16.09■□□□□ 0.17
CCSER1-205ENST00000505073 G3BP1Q13283 466 aaKnown RBP eCLIP16.09■□□□□ 0.17
CCSER1-205ENST00000505073 HLFQ16534 295 aa16.09■□□□□ 0.17
CCSER1-205ENST00000505073 TNPO1Q92973 898 aaKnown RBP16.09■□□□□ 0.17
CCSER1-205ENST00000505073 GBP4Q96PP9 640 aa16.09■□□□□ 0.17
CCSER1-205ENST00000505073 ISCA1Q9BUE6 129 aa16.09■□□□□ 0.17
CCSER1-205ENST00000505073 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.09■□□□□ 0.17
CCSER1-205ENST00000505073 MAP3K15Q6ZN16 1313 aa16.08■□□□□ 0.17
CCSER1-205ENST00000505073 SASH1O94885 1247 aa16.08■□□□□ 0.16
CCSER1-205ENST00000505073 PTMSP20962 102 aa16.08■□□□□ 0.16
CCSER1-205ENST00000505073 RABL6Q3YEC7 729 aaPredicted RBP16.08■□□□□ 0.16
CCSER1-205ENST00000505073 PALLDQ8WX93 1383 aa16.08■□□□□ 0.16
CCSER1-205ENST00000505073 ITPK1Q13572 414 aa16.08■□□□□ 0.16
CCSER1-205ENST00000505073 SKOR2Q2VWA4 1001 aaPredicted RBP16.08■□□□□ 0.16
CCSER1-205ENST00000505073 FAM182BQ5T319 152 aa16.08■□□□□ 0.16
CCSER1-205ENST00000505073 LMBR1LQ6UX01 489 aa16.08■□□□□ 0.16
CCSER1-205ENST00000505073 AFF2P51816 1311 aa16.08■□□□□ 0.16
CCSER1-205ENST00000505073 TRIM6-TRIM34B2RNG4 842 aa16.07■□□□□ 0.16
CCSER1-205ENST00000505073 RFX5P48382 616 aaPredicted RBP16.07■□□□□ 0.16
CCSER1-205ENST00000505073 FOXO4P98177 505 aa16.07■□□□□ 0.16
CCSER1-205ENST00000505073 PTF1AQ7RTS3 328 aa16.07■□□□□ 0.16
CCSER1-205ENST00000505073 ERC1Q8IUD2 1116 aa16.07■□□□□ 0.16
CCSER1-205ENST00000505073 CLASRPQ8N2M8 674 aaKnown RBP16.07■□□□□ 0.16
CCSER1-205ENST00000505073 TBC1D2BQ9UPU7 963 aa16.07■□□□□ 0.16
CCSER1-205ENST00000505073 CHMP3Q9Y3E7 222 aa16.07■□□□□ 0.16
CCSER1-205ENST00000505073 COL15A1P39059 1388 aa16.07■□□□□ 0.16
CCSER1-205ENST00000505073 GPTP24298 496 aa16.07■□□□□ 0.16
CCSER1-205ENST00000505073 RAB3GAP1Q15042 981 aa16.07■□□□□ 0.16
CCSER1-205ENST00000505073 RILPL2Q969X0 211 aa16.07■□□□□ 0.16
CCSER1-205ENST00000505073 PTPN12Q05209 780 aaKnown RBP16.06■□□□□ 0.16
CCSER1-205ENST00000505073 INTS5Q6P9B9 1019 aaKnown RBP16.06■□□□□ 0.16
CCSER1-205ENST00000505073 GIGYF2Q6Y7W6 1299 aaKnown RBP16.06■□□□□ 0.16
CCSER1-205ENST00000505073 GAS2L3Q86XJ1 694 aa16.06■□□□□ 0.16
CCSER1-205ENST00000505073 MAP4K4O95819 1239 aaPredicted RBP16.06■□□□□ 0.16
CCSER1-205ENST00000505073 CRKLP46109 303 aaKnown RBP16.06■□□□□ 0.16
CCSER1-205ENST00000505073 IL6STP40189 918 aaPredicted RBP16.05■□□□□ 0.16
CCSER1-205ENST00000505073 DZIP3Q86Y13 1208 aaKnown RBP16.05■□□□□ 0.16
CCSER1-205ENST00000505073 PI4K2BQ8TCG2 481 aa16.05■□□□□ 0.16
CCSER1-205ENST00000505073 CCDC87Q9NVE4 849 aa16.05■□□□□ 0.16
CCSER1-205ENST00000505073 TUBGCP6Q96RT7 1819 aa16.05■□□□□ 0.16
CCSER1-205ENST00000505073 AACSQ86V21 672 aa16.05■□□□□ 0.16
CCSER1-205ENST00000505073 GJD4Q96KN9 370 aaPredicted RBP16.05■□□□□ 0.16
CCSER1-205ENST00000505073 COPRSQ9NQ92 184 aa16.05■□□□□ 0.16
CCSER1-205ENST00000505073 AOX1Q06278 1338 aa16.05■□□□□ 0.16
CCSER1-205ENST00000505073 TPM2P07951 284 aa16.04■□□□□ 0.16
CCSER1-205ENST00000505073 IFIT2P09913 472 aaKnown RBP16.04■□□□□ 0.16
CCSER1-205ENST00000505073 KCNQ4P56696 695 aa16.04■□□□□ 0.16
CCSER1-205ENST00000505073 TRIM28Q13263 835 aaKnown RBP16.04■□□□□ 0.16
CCSER1-205ENST00000505073 CASC1Q6TDU7 716 aa16.04■□□□□ 0.16
CCSER1-205ENST00000505073 SMARCC1Q92922 1105 aaPredicted RBP16.04■□□□□ 0.16
CCSER1-205ENST00000505073 EAF2Q96CJ1 260 aaPredicted RBP16.04■□□□□ 0.16
CCSER1-205ENST00000505073 FAM89AQ96GI7 184 aa16.04■□□□□ 0.16
CCSER1-205ENST00000505073 ZMYND15Q9H091 742 aa16.03■□□□□ 0.16
CCSER1-205ENST00000505073 CCDC8Q9H0W5 538 aaPredicted RBP16.03■□□□□ 0.16
CCSER1-205ENST00000505073 EIF5P55010 431 aaKnown RBP16.03■□□□□ 0.16
CCSER1-205ENST00000505073 SYNE4Q8N205 404 aa16.03■□□□□ 0.16
CCSER1-205ENST00000505073 THSD7AQ9UPZ6 1657 aa16.03■□□□□ 0.16
CCSER1-205ENST00000505073 MYH14Q7Z406 1995 aaKnown RBP16.03■□□□□ 0.16
CCSER1-205ENST00000505073 NLRP10Q86W26 655 aa16.02■□□□□ 0.16
CCSER1-205ENST00000505073 TLR7Q9NYK1 1049 aaKnown RBP16.02■□□□□ 0.16
CCSER1-205ENST00000505073 USP42Q9H9J4 1324 aaKnown RBP16.02■□□□□ 0.15
CCSER1-205ENST00000505073 PCCAP05165 728 aaPredicted RBP16.02■□□□□ 0.15
CCSER1-205ENST00000505073 CCDC173Q0VFZ6 552 aa16.02■□□□□ 0.15
CCSER1-205ENST00000505073 TFCP2Q12800 502 aa16.01■□□□□ 0.15
CCSER1-205ENST00000505073 HSP90AB3PQ58FF7 597 aa16.01■□□□□ 0.15
CCSER1-205ENST00000505073 CCDC85AQ96PX6 553 aaPredicted RBP16.01■□□□□ 0.15
CCSER1-205ENST00000505073 TTC41PQ6P2S7 1318 aa16.01■□□□□ 0.15
CCSER1-205ENST00000505073 ZBTB38Q8NAP3 1195 aaPredicted RBP16.01■□□□□ 0.15
CCSER1-205ENST00000505073 ZNF594Q96JF6 807 aaPredicted RBP16.01■□□□□ 0.15
CCSER1-205ENST00000505073 ECHDC1Q9NTX5 307 aa16.01■□□□□ 0.15
CCSER1-205ENST00000505073 NUP98P52948 1817 aa16■□□□□ 0.15
CCSER1-205ENST00000505073 ERVV-1B6SEH8 477 aa16■□□□□ 0.15
CCSER1-205ENST00000505073 CHMLP26374 656 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms