RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 SPATA31A7Q8IWB4 1347 aa6.93□□□□□ -1.3
CDH9-203ENST00000505045 RASSF7Q02833 373 aa6.93□□□□□ -1.3
CDH9-203ENST00000505045 FAM182BQ5T319 152 aa6.93□□□□□ -1.3
CDH9-203ENST00000505045 CCDC24Q8N4L8 307 aa6.93□□□□□ -1.3
CDH9-203ENST00000505045 ABTB2Q8N961 1025 aa6.93□□□□□ -1.3
CDH9-203ENST00000505045 PRR7Q8TB68 274 aa6.93□□□□□ -1.3
CDH9-203ENST00000505045 RGPD1P0DJD0 1748 aa6.93□□□□□ -1.3
CDH9-203ENST00000505045 PARP4Q9UKK3 1724 aaKnown RBP6.93□□□□□ -1.3
CDH9-203ENST00000505045 CPDO75976 1380 aa6.93□□□□□ -1.3
CDH9-203ENST00000505045 EVC2Q86UK5 1308 aa6.92□□□□□ -1.3
CDH9-203ENST00000505045 PTPRNQ16849 979 aa6.92□□□□□ -1.3
CDH9-203ENST00000505045 MYSM1Q5VVJ2 828 aa6.92□□□□□ -1.3
CDH9-203ENST00000505045 RIC3Q7Z5B4 369 aa6.92□□□□□ -1.3
CDH9-203ENST00000505045 BLMP54132 1417 aaPredicted RBP6.92□□□□□ -1.3
CDH9-203ENST00000505045 MYOM1P52179 1685 aa6.92□□□□□ -1.3
CDH9-203ENST00000505045 SPATA31A1Q5TZJ5 1347 aa6.92□□□□□ -1.3
CDH9-203ENST00000505045 WNT7BP56706 349 aa6.92□□□□□ -1.3
CDH9-203ENST00000505045 PRPF38BQ5VTL8 546 aaKnown RBP6.92□□□□□ -1.3
CDH9-203ENST00000505045 DEFB132Q7Z7B7 95 aa6.92□□□□□ -1.3
CDH9-203ENST00000505045 CARD11Q9BXL7 1154 aa6.92□□□□□ -1.3
CDH9-203ENST00000505045 STRN4Q9NRL3 753 aa6.92□□□□□ -1.3
CDH9-203ENST00000505045 EVA1BQ9NVM1 165 aa6.92□□□□□ -1.3
CDH9-203ENST00000505045 NXF1Q9UBU9 619 aaKnown RBP6.92□□□□□ -1.3
CDH9-203ENST00000505045 LIMD1Q9UGP4 676 aa6.92□□□□□ -1.3
CDH9-203ENST00000505045 PEAK1Q9H792 1746 aa6.91□□□□□ -1.3
CDH9-203ENST00000505045 LARP1Q6PKG0 1096 aaKnown RBP6.91□□□□□ -1.3
CDH9-203ENST00000505045 CFAP99D6REC4 459 aa6.9□□□□□ -1.3
CDH9-203ENST00000505045 GCP02774 474 aa6.9□□□□□ -1.3
CDH9-203ENST00000505045 CCNYL3P0C7X3 344 aa6.9□□□□□ -1.3
CDH9-203ENST00000505045 KRT27Q7Z3Y8 459 aa6.9□□□□□ -1.3
CDH9-203ENST00000505045 CYP4X1Q8N118 509 aa6.9□□□□□ -1.3
CDH9-203ENST00000505045 MRGPRX2Q96LB1 330 aa6.9□□□□□ -1.3
CDH9-203ENST00000505045 TESK2Q96S53 571 aa6.9□□□□□ -1.3
CDH9-203ENST00000505045 USP35Q9P2H5 1018 aa6.9□□□□□ -1.3
CDH9-203ENST00000505045 SBF2Q86WG5 1849 aa6.9□□□□□ -1.3
CDH9-203ENST00000505045 A0A1W2PP64 1363 aa6.9□□□□□ -1.3
CDH9-203ENST00000505045 TTC21BQ7Z4L5 1316 aa6.9□□□□□ -1.31
CDH9-203ENST00000505045 LYPD8Q6UX82 237 aa6.9□□□□□ -1.31
CDH9-203ENST00000505045 SNIP1Q8TAD8 396 aaKnown RBP6.9□□□□□ -1.31
CDH9-203ENST00000505045 ZBTB3Q9H5J0 574 aa6.9□□□□□ -1.31
CDH9-203ENST00000505045 BRD4O60885 1362 aaPredicted RBP6.89□□□□□ -1.31
CDH9-203ENST00000505045 KTN1Q86UP2 1357 aaKnown RBP6.89□□□□□ -1.31
CDH9-203ENST00000505045 RREB1Q92766 1687 aa6.89□□□□□ -1.31
CDH9-203ENST00000505045 ZBTB7CA1YPR0 619 aa6.89□□□□□ -1.31
CDH9-203ENST00000505045 SMPD1P17405 629 aa6.89□□□□□ -1.31
CDH9-203ENST00000505045 KCNH2Q12809 1159 aa6.89□□□□□ -1.31
CDH9-203ENST00000505045 NUP188Q5SRE5 1749 aa6.89□□□□□ -1.31
CDH9-203ENST00000505045 RC3H1Q5TC82 1133 aaKnown RBP6.89□□□□□ -1.31
CDH9-203ENST00000505045 GPAT2Q6NUI2 795 aa6.89□□□□□ -1.31
CDH9-203ENST00000505045 NLRP13Q86W25 1043 aa6.89□□□□□ -1.31
CDH9-203ENST00000505045 UTRNP46939 3433 aa6.88□□□□□ -1.31
CDH9-203ENST00000505045 OVOS2A0A0J9YW53 1432 aa6.88□□□□□ -1.31
CDH9-203ENST00000505045 OVOS2Q6IE36 1432 aa6.88□□□□□ -1.31
CDH9-203ENST00000505045 ST20-MTHFSA0A0A6YYL1 179 aa6.88□□□□□ -1.31
CDH9-203ENST00000505045 LILRB3O75022 631 aa6.88□□□□□ -1.31
CDH9-203ENST00000505045 NME9Q86XW9 330 aa6.88□□□□□ -1.31
CDH9-203ENST00000505045 SLC12A5Q9H2X9 1139 aa6.88□□□□□ -1.31
CDH9-203ENST00000505045 RGPD2P0DJD1 1756 aa6.88□□□□□ -1.31
CDH9-203ENST00000505045 AATKQ6ZMQ8 1374 aa6.88□□□□□ -1.31
CDH9-203ENST00000505045 USP47Q96K76 1375 aa6.88□□□□□ -1.31
CDH9-203ENST00000505045 KIF20BQ96Q89 1820 aa6.88□□□□□ -1.31
CDH9-203ENST00000505045 CRB1P82279 1406 aa6.88□□□□□ -1.31
CDH9-203ENST00000505045 ABCC6O95255 1503 aa6.87□□□□□ -1.31
CDH9-203ENST00000505045 SIAH2O43255 324 aa6.87□□□□□ -1.31
CDH9-203ENST00000505045 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.87□□□□□ -1.31
CDH9-203ENST00000505045 EDC4Q6P2E9 1401 aaKnown RBP6.87□□□□□ -1.31
CDH9-203ENST00000505045 F12P00748 615 aaPredicted RBP6.87□□□□□ -1.31
CDH9-203ENST00000505045 SH3BP2P78314 561 aa6.87□□□□□ -1.31
CDH9-203ENST00000505045 QPCTQ16769 361 aa6.87□□□□□ -1.31
CDH9-203ENST00000505045 KIFC2Q96AC6 838 aa6.87□□□□□ -1.31
CDH9-203ENST00000505045 KRTAP9-9Q9BYP9 154 aa6.87□□□□□ -1.31
CDH9-203ENST00000505045 KRTAP9-4Q9BYQ2 154 aa6.87□□□□□ -1.31
CDH9-203ENST00000505045 UNC93B1Q9H1C4 597 aa6.87□□□□□ -1.31
CDH9-203ENST00000505045 GOLGB1Q14789 3259 aaKnown RBP6.86□□□□□ -1.31
CDH9-203ENST00000505045 TTC21AQ8NDW8 1320 aa6.86□□□□□ -1.31
CDH9-203ENST00000505045 DISP2A7MBM2 1401 aa6.86□□□□□ -1.31
CDH9-203ENST00000505045 J3QL48 77 aa6.86□□□□□ -1.31
CDH9-203ENST00000505045 IGHA1P01876 353 aa6.86□□□□□ -1.31
CDH9-203ENST00000505045 ARHGEF25Q86VW2 580 aa6.86□□□□□ -1.31
CDH9-203ENST00000505045 NPAS3Q8IXF0 933 aa6.86□□□□□ -1.31
CDH9-203ENST00000505045 TMC1Q8TDI8 760 aa6.86□□□□□ -1.31
CDH9-203ENST00000505045 USP31Q70CQ4 1352 aa6.86□□□□□ -1.31
CDH9-203ENST00000505045 SHANK3Q9BYB0 1731 aa6.86□□□□□ -1.31
CDH9-203ENST00000505045 FAM208AQ9UK61 1670 aaKnown RBP6.85□□□□□ -1.31
CDH9-203ENST00000505045 KRTAP4-8A0A0G2JLE6 195 aa6.85□□□□□ -1.31
CDH9-203ENST00000505045 TTC24A2A3L6 582 aaPredicted RBP6.85□□□□□ -1.31
CDH9-203ENST00000505045 CCDC125Q86Z20 511 aa6.85□□□□□ -1.31
CDH9-203ENST00000505045 TCP11L2Q8N4U5 519 aa6.85□□□□□ -1.31
CDH9-203ENST00000505045 PCGF6Q9BYE7 350 aa6.85□□□□□ -1.31
CDH9-203ENST00000505045 ERBB4Q15303 1308 aa6.85□□□□□ -1.31
CDH9-203ENST00000505045 WDR17Q8IZU2 1322 aa6.85□□□□□ -1.31
CDH9-203ENST00000505045 CLK2P49760 499 aaKnown RBP6.85□□□□□ -1.31
CDH9-203ENST00000505045 EVA1CP58658 441 aa6.85□□□□□ -1.31
CDH9-203ENST00000505045 KDM4CQ9H3R0 1056 aa6.85□□□□□ -1.31
CDH9-203ENST00000505045 GPBP1L1Q9HC44 474 aaPredicted RBP6.85□□□□□ -1.31
CDH9-203ENST00000505045 LRP5O75197 1615 aa6.85□□□□□ -1.31
CDH9-203ENST00000505045 RGPD3A6NKT7 1758 aaPredicted RBP6.85□□□□□ -1.31
CDH9-203ENST00000505045 RGPD4Q7Z3J3 1758 aa6.85□□□□□ -1.31
CDH9-203ENST00000505045 BTBD11A6QL63 1104 aa6.84□□□□□ -1.31
CDH9-203ENST00000505045 PER1O15534 1290 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms