RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 POLRMTO00411 1230 aaKnown RBP6.34□□□□□ -1.4
LMNB1-208ENST00000504788 NFIXQ14938 502 aa6.34□□□□□ -1.4
LMNB1-208ENST00000504788 TBC1D9BQ66K14 1250 aa6.34□□□□□ -1.4
LMNB1-208ENST00000504788 METTL22Q9BUU2 404 aaPredicted RBP6.34□□□□□ -1.4
LMNB1-208ENST00000504788 ZBTB3Q9H5J0 574 aa6.34□□□□□ -1.4
LMNB1-208ENST00000504788 NOB1Q9ULX3 412 aaKnown RBP6.34□□□□□ -1.4
LMNB1-208ENST00000504788 CARMIL3Q8ND23 1372 aa6.34□□□□□ -1.4
LMNB1-208ENST00000504788 NTSR2O95665 410 aa6.33□□□□□ -1.4
LMNB1-208ENST00000504788 AIMP1Q12904 312 aaKnown RBP6.33□□□□□ -1.4
LMNB1-208ENST00000504788 TCIRG1Q13488 830 aa6.33□□□□□ -1.4
LMNB1-208ENST00000504788 C20orf194Q5TEA3 1177 aa6.33□□□□□ -1.4
LMNB1-208ENST00000504788 STK31Q9BXU1 1019 aa6.33□□□□□ -1.4
LMNB1-208ENST00000504788 CHMP4AQ9BY43 222 aa6.33□□□□□ -1.4
LMNB1-208ENST00000504788 SMC4Q9NTJ3 1288 aa6.33□□□□□ -1.4
LMNB1-208ENST00000504788 ATF5Q9Y2D1 282 aaPredicted RBP6.33□□□□□ -1.4
LMNB1-208ENST00000504788 MAP3K2Q9Y2U5 619 aa6.33□□□□□ -1.4
LMNB1-208ENST00000504788 UTYO14607 1347 aa6.33□□□□□ -1.4
LMNB1-208ENST00000504788 KIF16BQ96L93 1317 aa6.33□□□□□ -1.4
LMNB1-208ENST00000504788 RIC1Q4ADV7 1423 aa6.33□□□□□ -1.4
LMNB1-208ENST00000504788 A0A087WZG4 1122 aa6.32□□□□□ -1.4
LMNB1-208ENST00000504788 RFC4P35249 363 aa6.32□□□□□ -1.4
LMNB1-208ENST00000504788 INTS3Q68E01 1043 aaKnown RBP6.32□□□□□ -1.4
LMNB1-208ENST00000504788 ATF7IPQ6VMQ6 1270 aa6.32□□□□□ -1.4
LMNB1-208ENST00000504788 NLRP10Q86W26 655 aa6.32□□□□□ -1.4
LMNB1-208ENST00000504788 DNAAF4Q8WXU2 420 aa6.32□□□□□ -1.4
LMNB1-208ENST00000504788 KAZALD1Q96I82 304 aa6.32□□□□□ -1.4
LMNB1-208ENST00000504788 MTFR1LQ9H019 292 aa6.32□□□□□ -1.4
LMNB1-208ENST00000504788 C10orf71Q711Q0 1435 aa6.32□□□□□ -1.4
LMNB1-208ENST00000504788 A0A1B0GUL6 1792 aa6.32□□□□□ -1.4
LMNB1-208ENST00000504788 ABCC12Q96J65 1359 aa6.32□□□□□ -1.4
LMNB1-208ENST00000504788 KLRG2A4D1S0 409 aaPredicted RBP6.32□□□□□ -1.4
LMNB1-208ENST00000504788 NEURL1BA8MQ27 555 aa6.32□□□□□ -1.4
LMNB1-208ENST00000504788 PLIN1O60240 522 aa6.32□□□□□ -1.4
LMNB1-208ENST00000504788 FKBP5Q13451 457 aaPredicted RBP6.32□□□□□ -1.4
LMNB1-208ENST00000504788 CWF19L2Q2TBE0 894 aaKnown RBP6.32□□□□□ -1.4
LMNB1-208ENST00000504788 SUSD4Q5VX71 490 aa6.32□□□□□ -1.4
LMNB1-208ENST00000504788 SYNE4Q8N205 404 aa6.32□□□□□ -1.4
LMNB1-208ENST00000504788 NLGN1Q8N2Q7 840 aa6.32□□□□□ -1.4
LMNB1-208ENST00000504788 ZBTB7AO95365 584 aa6.31□□□□□ -1.4
LMNB1-208ENST00000504788 MSL1Q68DK7 614 aa6.31□□□□□ -1.4
LMNB1-208ENST00000504788 LINS1Q8NG48 757 aa6.31□□□□□ -1.4
LMNB1-208ENST00000504788 USP44Q9H0E7 712 aa6.31□□□□□ -1.4
LMNB1-208ENST00000504788 ZNF330Q9Y3S2 320 aaPredicted RBP6.31□□□□□ -1.4
LMNB1-208ENST00000504788 SNED1Q8TER0 1413 aa6.31□□□□□ -1.4
LMNB1-208ENST00000504788 LRRC37AA6NMS7 1700 aa6.3□□□□□ -1.4
LMNB1-208ENST00000504788 LTBP1Q14766 1721 aa6.3□□□□□ -1.4
LMNB1-208ENST00000504788 ATP5J2-PTCD1G3V325 749 aa6.3□□□□□ -1.4
LMNB1-208ENST00000504788 H7C1W4 665 aa6.3□□□□□ -1.4
LMNB1-208ENST00000504788 ZPR1O75312 459 aa6.3□□□□□ -1.4
LMNB1-208ENST00000504788 MMP10P09238 476 aa6.3□□□□□ -1.4
LMNB1-208ENST00000504788 NBPF7P0C2Y1 421 aaPredicted RBP6.3□□□□□ -1.4
LMNB1-208ENST00000504788 RRP1P56182 461 aaKnown RBP6.3□□□□□ -1.4
LMNB1-208ENST00000504788 GCKRQ14397 625 aa6.3□□□□□ -1.4
LMNB1-208ENST00000504788 SLC10A5Q5PT55 438 aa6.3□□□□□ -1.4
LMNB1-208ENST00000504788 PRR5LQ6MZQ0 368 aa6.3□□□□□ -1.4
LMNB1-208ENST00000504788 C3orf67Q6ZVT6 689 aa6.3□□□□□ -1.4
LMNB1-208ENST00000504788 TMEM57Q8N5G2 664 aa6.3□□□□□ -1.4
LMNB1-208ENST00000504788 CCDC191Q8NCU4 936 aa6.3□□□□□ -1.4
LMNB1-208ENST00000504788 CACNA1SQ13698 1873 aa6.3□□□□□ -1.4
LMNB1-208ENST00000504788 ZBTB7BO15156 539 aaPredicted RBP6.29□□□□□ -1.4
LMNB1-208ENST00000504788 SERPINB2P05120 415 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 KCNA3P22001 575 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 GPTP24298 496 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 ZKSCAN2Q63HK3 967 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 KIF6Q6ZMV9 814 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 RIC3Q7Z5B4 369 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 MYD88Q99836 296 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 NIP7Q9Y221 180 aaKnown RBP eCLIP6.29□□□□□ -1.4
LMNB1-208ENST00000504788 CDHR2Q9BYE9 1310 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 ALDH1L1O75891 902 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 DDX58O95786 925 aaKnown RBP6.29□□□□□ -1.4
LMNB1-208ENST00000504788 PDE3AQ14432 1141 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 CRY2Q49AN0 593 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 PARP10Q53GL7 1025 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 HSP90AB3PQ58FF7 597 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 EPHA10Q5JZY3 1008 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 PANK1Q8TE04 598 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 CLUAP1Q96AJ1 413 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 PLA2G12BQ9BX93 195 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 API5Q9BZZ5 524 aaKnown RBP6.29□□□□□ -1.4
LMNB1-208ENST00000504788 PCDH10Q9P2E7 1040 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 ZNF652Q9Y2D9 606 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 SLX4Q8IY92 1834 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 ARFGEF1Q9Y6D6 1849 aa6.29□□□□□ -1.4
LMNB1-208ENST00000504788 PCCAP05165 728 aaPredicted RBP6.28□□□□□ -1.4
LMNB1-208ENST00000504788 ATXN8OSP0DMR3 200 aa6.28□□□□□ -1.4
LMNB1-208ENST00000504788 FOXO4P98177 505 aa6.28□□□□□ -1.4
LMNB1-208ENST00000504788 ERFEQ4G0M1 354 aa6.28□□□□□ -1.4
LMNB1-208ENST00000504788 NUTM1Q86Y26 1132 aa6.28□□□□□ -1.4
LMNB1-208ENST00000504788 DZIP1LQ8IYY4 767 aaKnown RBP6.28□□□□□ -1.4
LMNB1-208ENST00000504788 ZBTB38Q8NAP3 1195 aaPredicted RBP6.28□□□□□ -1.4
LMNB1-208ENST00000504788 FRAT1Q92837 279 aaPredicted RBP6.28□□□□□ -1.4
LMNB1-208ENST00000504788 FAM89AQ96GI7 184 aa6.28□□□□□ -1.4
LMNB1-208ENST00000504788 DCBLD2Q96PD2 775 aa6.28□□□□□ -1.4
LMNB1-208ENST00000504788 MEIS3Q99687 375 aa6.28□□□□□ -1.4
LMNB1-208ENST00000504788 SRCIN1Q9C0H9 1055 aa6.28□□□□□ -1.4
LMNB1-208ENST00000504788 SUPT16HQ9Y5B9 1047 aaKnown RBP6.28□□□□□ -1.4
LMNB1-208ENST00000504788 SPEF2Q9C093 1822 aa6.28□□□□□ -1.4
LMNB1-208ENST00000504788 GRM8O00222 908 aa6.27□□□□□ -1.41
LMNB1-208ENST00000504788 IPO8O15397 1037 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms