RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 SRCIN1Q9C0H9 1055 aa17.68■□□□□ 0.42
DDR1-253ENST00000504651 DDX60Q8IY21 1712 aaKnown RBP17.67■□□□□ 0.42
DDR1-253ENST00000504651 CCT4P50991 539 aaKnown RBP17.67■□□□□ 0.42
DDR1-253ENST00000504651 SUSD4Q5VX71 490 aa17.67■□□□□ 0.42
DDR1-253ENST00000504651 NBPF5PQ86XG9 351 aaPredicted RBP17.67■□□□□ 0.42
DDR1-253ENST00000504651 DZIP1LQ8IYY4 767 aaKnown RBP17.67■□□□□ 0.42
DDR1-253ENST00000504651 CCDC191Q8NCU4 936 aa17.67■□□□□ 0.42
DDR1-253ENST00000504651 NYXQ9GZU5 481 aa17.67■□□□□ 0.42
DDR1-253ENST00000504651 CWC25Q9NXE8 425 aaPredicted RBP17.67■□□□□ 0.42
DDR1-253ENST00000504651 ALDH1L1O75891 902 aa17.66■□□□□ 0.42
DDR1-253ENST00000504651 NTSR2O95665 410 aa17.66■□□□□ 0.42
DDR1-253ENST00000504651 MS4A1P11836 297 aa17.66■□□□□ 0.42
DDR1-253ENST00000504651 TRIM28Q13263 835 aaKnown RBP17.66■□□□□ 0.42
DDR1-253ENST00000504651 CNBD1Q8NA66 436 aa17.66■□□□□ 0.42
DDR1-253ENST00000504651 UTP14AQ9BVJ6 771 aaKnown RBP17.66■□□□□ 0.42
DDR1-253ENST00000504651 TNRC6CQ9HCJ0 1690 aaKnown RBP17.66■□□□□ 0.42
DDR1-253ENST00000504651 ANKRD31Q8N7Z5 1873 aa17.66■□□□□ 0.42
DDR1-253ENST00000504651 KIF13BQ9NQT8 1826 aa17.65■□□□□ 0.42
DDR1-253ENST00000504651 PTGER2P43116 358 aa17.65■□□□□ 0.42
DDR1-253ENST00000504651 SGIP1Q9BQI5 828 aa17.65■□□□□ 0.42
DDR1-253ENST00000504651 TRMT112Q9UI30 125 aaKnown RBP17.65■□□□□ 0.42
DDR1-253ENST00000504651 RNF123Q5XPI4 1314 aa17.65■□□□□ 0.42
DDR1-253ENST00000504651 C10orf71Q711Q0 1435 aa17.64■□□□□ 0.42
DDR1-253ENST00000504651 GTF2E1P29083 439 aaPredicted RBP17.64■□□□□ 0.41
DDR1-253ENST00000504651 ST5P78524 1137 aa17.64■□□□□ 0.41
DDR1-253ENST00000504651 GCKRQ14397 625 aa17.64■□□□□ 0.41
DDR1-253ENST00000504651 PRR5LQ6MZQ0 368 aa17.64■□□□□ 0.41
DDR1-253ENST00000504651 TMEM57Q8N5G2 664 aa17.64■□□□□ 0.41
DDR1-253ENST00000504651 ABCC12Q96J65 1359 aa17.64■□□□□ 0.41
DDR1-253ENST00000504651 MYH3P11055 1940 aa17.63■□□□□ 0.41
DDR1-253ENST00000504651 RLBP1P12271 317 aa17.63■□□□□ 0.41
DDR1-253ENST00000504651 INTS3Q68E01 1043 aaKnown RBP17.63■□□□□ 0.41
DDR1-253ENST00000504651 TPTE2Q6XPS3 522 aa17.63■□□□□ 0.41
DDR1-253ENST00000504651 NUTM1Q86Y26 1132 aa17.63■□□□□ 0.41
DDR1-253ENST00000504651 PANK1Q8TE04 598 aa17.63■□□□□ 0.41
DDR1-253ENST00000504651 SUPT16HQ9Y5B9 1047 aaKnown RBP17.63■□□□□ 0.41
DDR1-253ENST00000504651 SH3TC1Q8TE82 1336 aa17.63■□□□□ 0.41
DDR1-253ENST00000504651 COL11A2P13942 1736 aaPredicted RBP17.62■□□□□ 0.41
DDR1-253ENST00000504651 PCCAP05165 728 aaPredicted RBP17.62■□□□□ 0.41
DDR1-253ENST00000504651 RTL5Q5HYW3 569 aaPredicted RBP17.62■□□□□ 0.41
DDR1-253ENST00000504651 ITPRIPQ8IWB1 547 aa17.62■□□□□ 0.41
DDR1-253ENST00000504651 CCDC24Q8N4L8 307 aa17.62■□□□□ 0.41
DDR1-253ENST00000504651 ZBTB38Q8NAP3 1195 aaPredicted RBP17.62■□□□□ 0.41
DDR1-253ENST00000504651 C9orf78Q9NZ63 289 aaPredicted RBP17.62■□□□□ 0.41
DDR1-253ENST00000504651 RIC1Q4ADV7 1423 aa17.62■□□□□ 0.41
DDR1-253ENST00000504651 GRM8O00222 908 aa17.61■□□□□ 0.41
DDR1-253ENST00000504651 PDE3AQ14432 1141 aa17.61■□□□□ 0.41
DDR1-253ENST00000504651 ERFEQ4G0M1 354 aa17.61■□□□□ 0.41
DDR1-253ENST00000504651 UBE3BQ7Z3V4 1068 aa17.61■□□□□ 0.41
DDR1-253ENST00000504651 KLHL34Q8N239 644 aa17.61■□□□□ 0.41
DDR1-253ENST00000504651 FAM89AQ96GI7 184 aa17.61■□□□□ 0.41
DDR1-253ENST00000504651 PPP1R1BQ9UD71 204 aaPredicted RBP17.61■□□□□ 0.41
DDR1-253ENST00000504651 C20orf194Q5TEA3 1177 aa17.6■□□□□ 0.41
DDR1-253ENST00000504651 JARID2Q92833 1246 aaPredicted RBP17.6■□□□□ 0.41
DDR1-253ENST00000504651 CDHR2Q9BYE9 1310 aa17.6■□□□□ 0.41
DDR1-253ENST00000504651 KIAA1551Q9HCM1 1747 aa17.6■□□□□ 0.41
DDR1-253ENST00000504651 DLEC1Q9Y238 1755 aa17.6■□□□□ 0.41
DDR1-253ENST00000504651 MVPQ14764 893 aaKnown RBP17.59■□□□□ 0.41
DDR1-253ENST00000504651 COG6Q9Y2V7 657 aa17.59■□□□□ 0.41
DDR1-253ENST00000504651 H7C1W4 665 aa17.58■□□□□ 0.4
DDR1-253ENST00000504651 IRS4O14654 1257 aaPredicted RBP17.58■□□□□ 0.4
DDR1-253ENST00000504651 SYNE4Q8N205 404 aa17.58■□□□□ 0.4
DDR1-253ENST00000504651 CACNA1SQ13698 1873 aa17.57■□□□□ 0.4
DDR1-253ENST00000504651 UTYO14607 1347 aa17.57■□□□□ 0.4
DDR1-253ENST00000504651 HCLS1P14317 486 aaPredicted RBP17.57■□□□□ 0.4
DDR1-253ENST00000504651 HSP90B1P14625 803 aaKnown RBP17.57■□□□□ 0.4
DDR1-253ENST00000504651 CASP7P55210 303 aa17.57■□□□□ 0.4
DDR1-253ENST00000504651 MEIS3Q99687 375 aa17.57■□□□□ 0.4
DDR1-253ENST00000504651 NBPF7P0C2Y1 421 aaPredicted RBP17.56■□□□□ 0.4
DDR1-253ENST00000504651 UBTFL1P0CB47 393 aaPredicted RBP17.56■□□□□ 0.4
DDR1-253ENST00000504651 BRIP1Q9BX63 1249 aa17.56■□□□□ 0.4
DDR1-253ENST00000504651 USP44Q9H0E7 712 aa17.56■□□□□ 0.4
DDR1-253ENST00000504651 DDX19BQ9UMR2 479 aa17.56■□□□□ 0.4
DDR1-253ENST00000504651 PDE8AO60658 829 aa17.55■□□□□ 0.4
DDR1-253ENST00000504651 GNAI3P08754 354 aa17.55■□□□□ 0.4
DDR1-253ENST00000504651 PDE6BP35913 854 aa17.55■□□□□ 0.4
DDR1-253ENST00000504651 SLC10A5Q5PT55 438 aa17.55■□□□□ 0.4
DDR1-253ENST00000504651 NLRP3Q96P20 1036 aa17.55■□□□□ 0.4
DDR1-253ENST00000504651 SUCLG2Q96I99 432 aa17.54■□□□□ 0.4
DDR1-253ENST00000504651 CD2APQ9Y5K6 639 aa17.54■□□□□ 0.4
DDR1-253ENST00000504651 BRCA1P38398 1863 aaKnown RBP17.53■□□□□ 0.4
DDR1-253ENST00000504651 PLA2G12BQ9BX93 195 aa17.53■□□□□ 0.4
DDR1-253ENST00000504651 FHDC1Q9C0D6 1143 aaPredicted RBP17.53■□□□□ 0.4
DDR1-253ENST00000504651 HDAC5Q9UQL6 1122 aa17.53■□□□□ 0.4
DDR1-253ENST00000504651 SPEF2Q9C093 1822 aa17.53■□□□□ 0.4
DDR1-253ENST00000504651 CTSWP56202 376 aa17.52■□□□□ 0.4
DDR1-253ENST00000504651 C3orf67Q6ZVT6 689 aa17.52■□□□□ 0.4
DDR1-253ENST00000504651 C2CD5Q86YS7 1000 aa17.52■□□□□ 0.4
DDR1-253ENST00000504651 CRBNQ96SW2 442 aa17.52■□□□□ 0.4
DDR1-253ENST00000504651 CHMP4BQ9H444 224 aaKnown RBP17.52■□□□□ 0.4
DDR1-253ENST00000504651 ZBTB7BO15156 539 aaPredicted RBP17.51■□□□□ 0.39
DDR1-253ENST00000504651 RPGRQ92834 1020 aaKnown RBP17.51■□□□□ 0.39
DDR1-253ENST00000504651 PDZRN3Q9UPQ7 1066 aa17.51■□□□□ 0.39
DDR1-253ENST00000504651 LRRFIP2Q9Y608 721 aaKnown RBP17.51■□□□□ 0.39
DDR1-253ENST00000504651 H0YIN7 160 aa17.5■□□□□ 0.39
DDR1-253ENST00000504651 GNAI2P04899 355 aa17.5■□□□□ 0.39
DDR1-253ENST00000504651 CHRNA5P30532 468 aa17.5■□□□□ 0.39
DDR1-253ENST00000504651 TGFB2P61812 414 aa17.5■□□□□ 0.39
DDR1-253ENST00000504651 CCDC152Q4G0S7 254 aa17.5■□□□□ 0.39
DDR1-253ENST00000504651 EPHA10Q5JZY3 1008 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms