RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 DLEC1Q9Y238 1755 aa15.21■□□□□ 0.02
PDLIM5-208ENST00000504489 SERPINB2P05120 415 aa15.2■□□□□ 0.02
PDLIM5-208ENST00000504489 SMC4Q9NTJ3 1288 aa15.2■□□□□ 0.02
PDLIM5-208ENST00000504489 PPP1R1BQ9UD71 204 aaPredicted RBP15.2■□□□□ 0.02
PDLIM5-208ENST00000504489 ADCY9O60503 1353 aa15.2■□□□□ 0.02
PDLIM5-208ENST00000504489 CACNA1SQ13698 1873 aa15.19■□□□□ 0.02
PDLIM5-208ENST00000504489 PI4KAP2A4QPH2 592 aa15.19■□□□□ 0.02
PDLIM5-208ENST00000504489 TRIM28Q13263 835 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-208ENST00000504489 FKBP5Q13451 457 aaPredicted RBP15.19■□□□□ 0.02
PDLIM5-208ENST00000504489 PARP10Q53GL7 1025 aa15.19■□□□□ 0.02
PDLIM5-208ENST00000504489 PI4KAP1Q8N8J0 262 aa15.19■□□□□ 0.02
PDLIM5-208ENST00000504489 ISCA1Q9BUE6 129 aa15.19■□□□□ 0.02
PDLIM5-208ENST00000504489 METTL22Q9BUU2 404 aaPredicted RBP15.19■□□□□ 0.02
PDLIM5-208ENST00000504489 MAP3K2Q9Y2U5 619 aa15.19■□□□□ 0.02
PDLIM5-208ENST00000504489 DDX60Q8IY21 1712 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-208ENST00000504489 IBTKQ9P2D0 1353 aaPredicted RBP15.19■□□□□ 0.02
PDLIM5-208ENST00000504489 PTPRCP08575 1304 aa15.18■□□□□ 0.02
PDLIM5-208ENST00000504489 UBN2Q6ZU65 1347 aa15.18■□□□□ 0.02
PDLIM5-208ENST00000504489 BCL2L13Q9BXK5 485 aa15.18■□□□□ 0.02
PDLIM5-208ENST00000504489 C10orf71Q711Q0 1435 aa15.17■□□□□ 0.02
PDLIM5-208ENST00000504489 SRCAPQ6ZRS2 3230 aa15.17■□□□□ 0.02
PDLIM5-208ENST00000504489 GPTP24298 496 aa15.17■□□□□ 0.02
PDLIM5-208ENST00000504489 TPTE2Q6XPS3 522 aa15.17■□□□□ 0.02
PDLIM5-208ENST00000504489 NLRP10Q86W26 655 aa15.17■□□□□ 0.02
PDLIM5-208ENST00000504489 NYXQ9GZU5 481 aa15.17■□□□□ 0.02
PDLIM5-208ENST00000504489 CD2APQ9Y5K6 639 aa15.17■□□□□ 0.02
PDLIM5-208ENST00000504489 SUSD4Q5VX71 490 aa15.16■□□□□ 0.02
PDLIM5-208ENST00000504489 PPP1R42Q7Z4L9 355 aa15.16■□□□□ 0.02
PDLIM5-208ENST00000504489 NBPF5PQ86XG9 351 aaPredicted RBP15.16■□□□□ 0.02
PDLIM5-208ENST00000504489 DNAAF4Q8WXU2 420 aa15.16■□□□□ 0.02
PDLIM5-208ENST00000504489 MYD88Q99836 296 aa15.16■□□□□ 0.02
PDLIM5-208ENST00000504489 COL11A2P13942 1736 aaPredicted RBP15.15■□□□□ 0.02
PDLIM5-208ENST00000504489 ATP5J2-PTCD1G3V325 749 aa15.15■□□□□ 0.02
PDLIM5-208ENST00000504489 NEXNQ0ZGT2 675 aa15.15■□□□□ 0.02
PDLIM5-208ENST00000504489 PRR5LQ6MZQ0 368 aa15.15■□□□□ 0.02
PDLIM5-208ENST00000504489 CNBD1Q8NA66 436 aa15.15■□□□□ 0.02
PDLIM5-208ENST00000504489 CCDC191Q8NCU4 936 aa15.15■□□□□ 0.02
PDLIM5-208ENST00000504489 FHDC1Q9C0D6 1143 aaPredicted RBP15.15■□□□□ 0.02
PDLIM5-208ENST00000504489 RNF123Q5XPI4 1314 aa15.15■□□□□ 0.02
PDLIM5-208ENST00000504489 KIF16BQ96L93 1317 aa15.15■□□□□ 0.02
PDLIM5-208ENST00000504489 TNRC6CQ9HCJ0 1690 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-208ENST00000504489 F6X3S4 739 aa15.14■□□□□ 0.01
PDLIM5-208ENST00000504489 BCAR3O75815 825 aa15.14■□□□□ 0.01
PDLIM5-208ENST00000504489 NTSR2O95665 410 aa15.14■□□□□ 0.01
PDLIM5-208ENST00000504489 ARHGAP45Q92619 1136 aa15.14■□□□□ 0.01
PDLIM5-208ENST00000504489 UTP14AQ9BVJ6 771 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-208ENST00000504489 ARFGEF1Q9Y6D6 1849 aa15.14■□□□□ 0.01
PDLIM5-208ENST00000504489 FAM177BA6PVY3 158 aa15.13■□□□□ 0.01
PDLIM5-208ENST00000504489 NPHP1O15259 732 aa15.13■□□□□ 0.01
PDLIM5-208ENST00000504489 IGKV5-2P06315 115 aa15.13■□□□□ 0.01
PDLIM5-208ENST00000504489 TAF1P21675 1872 aa15.13■□□□□ 0.01
PDLIM5-208ENST00000504489 ST5P78524 1137 aa15.13■□□□□ 0.01
PDLIM5-208ENST00000504489 RIC1Q4ADV7 1423 aa15.13■□□□□ 0.01
PDLIM5-208ENST00000504489 LINS1Q8NG48 757 aa15.13■□□□□ 0.01
PDLIM5-208ENST00000504489 SYT17Q9BSW7 474 aa15.13■□□□□ 0.01
PDLIM5-208ENST00000504489 BRIP1Q9BX63 1249 aa15.13■□□□□ 0.01
PDLIM5-208ENST00000504489 CWC25Q9NXE8 425 aaPredicted RBP15.13■□□□□ 0.01
PDLIM5-208ENST00000504489 NOB1Q9ULX3 412 aaKnown RBP15.13■□□□□ 0.01
PDLIM5-208ENST00000504489 PXDNLA1KZ92 1463 aa15.13■□□□□ 0.01
PDLIM5-208ENST00000504489 NEURL1BA8MQ27 555 aa15.12■□□□□ 0.01
PDLIM5-208ENST00000504489 IPO8O15397 1037 aaKnown RBP15.12■□□□□ 0.01
PDLIM5-208ENST00000504489 GTF2E1P29083 439 aaPredicted RBP15.12■□□□□ 0.01
PDLIM5-208ENST00000504489 TGFB2P61812 414 aa15.12■□□□□ 0.01
PDLIM5-208ENST00000504489 KLHL34Q8N239 644 aa15.12■□□□□ 0.01
PDLIM5-208ENST00000504489 SP7Q8TDD2 431 aaPredicted RBP15.12■□□□□ 0.01
PDLIM5-208ENST00000504489 API5Q9BZZ5 524 aaKnown RBP15.12■□□□□ 0.01
PDLIM5-208ENST00000504489 TRMT112Q9UI30 125 aaKnown RBP15.12■□□□□ 0.01
PDLIM5-208ENST00000504489 CWF19L2Q2TBE0 894 aaKnown RBP15.11■□□□□ 0.01
PDLIM5-208ENST00000504489 ERFEQ4G0M1 354 aa15.11■□□□□ 0.01
PDLIM5-208ENST00000504489 SLC10A5Q5PT55 438 aa15.11■□□□□ 0.01
PDLIM5-208ENST00000504489 BEND3Q5T5X7 828 aa15.11■□□□□ 0.01
PDLIM5-208ENST00000504489 NUTM1Q86Y26 1132 aa15.11■□□□□ 0.01
PDLIM5-208ENST00000504489 RCAN3Q9UKA8 241 aa15.11■□□□□ 0.01
PDLIM5-208ENST00000504489 PDZRN3Q9UPQ7 1066 aa15.11■□□□□ 0.01
PDLIM5-208ENST00000504489 ALDH1L1O75891 902 aa15.1■□□□□ 0.01
PDLIM5-208ENST00000504489 PCCAP05165 728 aaPredicted RBP15.1■□□□□ 0.01
PDLIM5-208ENST00000504489 PDE6BP35913 854 aa15.1■□□□□ 0.01
PDLIM5-208ENST00000504489 SLC4A10Q6U841 1118 aa15.1■□□□□ 0.01
PDLIM5-208ENST00000504489 CCDC24Q8N4L8 307 aa15.1■□□□□ 0.01
PDLIM5-208ENST00000504489 ZBTB38Q8NAP3 1195 aaPredicted RBP15.1■□□□□ 0.01
PDLIM5-208ENST00000504489 SH3TC1Q8TE82 1336 aa15.1■□□□□ 0.01
PDLIM5-208ENST00000504489 SLX4Q8IY92 1834 aa15.1■□□□□ 0.01
PDLIM5-208ENST00000504489 ABCC12Q96J65 1359 aa15.1■□□□□ 0.01
PDLIM5-208ENST00000504489 KLRG2A4D1S0 409 aaPredicted RBP15.09■□□□□ 0.01
PDLIM5-208ENST00000504489 GCKRQ14397 625 aa15.09■□□□□ 0.01
PDLIM5-208ENST00000504489 ATF7IPQ6VMQ6 1270 aa15.09■□□□□ 0.01
PDLIM5-208ENST00000504489 NLGN2Q8NFZ4 835 aa15.09■□□□□ 0.01
PDLIM5-208ENST00000504489 FAM89AQ96GI7 184 aa15.09■□□□□ 0.01
PDLIM5-208ENST00000504489 CCDC88AQ3V6T2 1871 aa15.08■□□□□ 0.01
PDLIM5-208ENST00000504489 ZKSCAN2Q63HK3 967 aa15.08■□□□□ 0
PDLIM5-208ENST00000504489 SYNE4Q8N205 404 aa15.08■□□□□ 0
PDLIM5-208ENST00000504489 FRAT1Q92837 279 aaPredicted RBP15.08■□□□□ 0
PDLIM5-208ENST00000504489 SRCIN1Q9C0H9 1055 aa15.08■□□□□ 0
PDLIM5-208ENST00000504489 A0A0G2JLW4 131 aa15.07■□□□□ 0
PDLIM5-208ENST00000504489 H0YIN7 160 aa15.07■□□□□ 0
PDLIM5-208ENST00000504489 H7C1W4 665 aa15.07■□□□□ 0
PDLIM5-208ENST00000504489 TRIM27P14373 513 aa15.07■□□□□ 0
PDLIM5-208ENST00000504489 HSP90B1P14625 803 aaKnown RBP15.07■□□□□ 0
PDLIM5-208ENST00000504489 DPEP1P16444 411 aa15.07■□□□□ 0
PDLIM5-208ENST00000504489 KCNA3P22001 575 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms