RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 PTPN12Q05209 780 aaKnown RBP11.89□□□□□ -0.51
COL1A1-210ENST00000504289 BARGINQ6ZT62 677 aa11.89□□□□□ -0.51
COL1A1-210ENST00000504289 PLA2G12BQ9BX93 195 aa11.89□□□□□ -0.51
COL1A1-210ENST00000504289 ANO2Q9NQ90 1003 aa11.89□□□□□ -0.51
COL1A1-210ENST00000504289 PA2G4Q9UQ80 394 aaKnown RBP11.89□□□□□ -0.51
COL1A1-210ENST00000504289 SPATA31A1Q5TZJ5 1347 aa11.88□□□□□ -0.51
COL1A1-210ENST00000504289 ITGB4P16144 1822 aa11.88□□□□□ -0.51
COL1A1-210ENST00000504289 A1BGP04217 495 aa11.88□□□□□ -0.51
COL1A1-210ENST00000504289 ATP5JP18859 108 aa11.88□□□□□ -0.51
COL1A1-210ENST00000504289 MCM4P33991 863 aa11.88□□□□□ -0.51
COL1A1-210ENST00000504289 DEKP35659 375 aaKnown RBP11.88□□□□□ -0.51
COL1A1-210ENST00000504289 FOXO4P98177 505 aa11.88□□□□□ -0.51
COL1A1-210ENST00000504289 RAB3GAP1Q15042 981 aa11.88□□□□□ -0.51
COL1A1-210ENST00000504289 EPHA10Q5JZY3 1008 aa11.88□□□□□ -0.51
COL1A1-210ENST00000504289 TSHZ3Q63HK5 1081 aa11.88□□□□□ -0.51
COL1A1-210ENST00000504289 KIF6Q6ZMV9 814 aa11.88□□□□□ -0.51
COL1A1-210ENST00000504289 UNC5CLQ8IV45 518 aa11.88□□□□□ -0.51
COL1A1-210ENST00000504289 EAF2Q96CJ1 260 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-210ENST00000504289 GBP4Q96PP9 640 aa11.88□□□□□ -0.51
COL1A1-210ENST00000504289 BCL11AQ9H165 835 aa11.88□□□□□ -0.51
COL1A1-210ENST00000504289 DIAPH3Q9NSV4 1193 aa11.88□□□□□ -0.51
COL1A1-210ENST00000504289 RGS17Q9UGC6 210 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-210ENST00000504289 PHLPP1O60346 1717 aa11.88□□□□□ -0.51
COL1A1-210ENST00000504289 ERVV-1B6SEH8 477 aa11.87□□□□□ -0.51
COL1A1-210ENST00000504289 PCCAP05165 728 aaPredicted RBP11.87□□□□□ -0.51
COL1A1-210ENST00000504289 IL15P40933 162 aaPredicted RBP11.87□□□□□ -0.51
COL1A1-210ENST00000504289 GSE1Q14687 1217 aa11.87□□□□□ -0.51
COL1A1-210ENST00000504289 TTLL7Q6ZT98 887 aa11.87□□□□□ -0.51
COL1A1-210ENST00000504289 KCNB2Q92953 911 aa11.87□□□□□ -0.51
COL1A1-210ENST00000504289 INTS4Q96HW7 963 aaKnown RBP11.87□□□□□ -0.51
COL1A1-210ENST00000504289 MAP3K15Q6ZN16 1313 aa11.86□□□□□ -0.51
COL1A1-210ENST00000504289 CDHR2Q9BYE9 1310 aa11.86□□□□□ -0.51
COL1A1-210ENST00000504289 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
COL1A1-210ENST00000504289 NRAPQ86VF7 1730 aa11.86□□□□□ -0.51
COL1A1-210ENST00000504289 ATP5J2-PTCD1G3V325 749 aa11.86□□□□□ -0.51
COL1A1-210ENST00000504289 IL6STP40189 918 aaPredicted RBP11.86□□□□□ -0.51
COL1A1-210ENST00000504289 TNNI3KQ59H18 835 aa11.86□□□□□ -0.51
COL1A1-210ENST00000504289 LMBR1LQ6UX01 489 aa11.86□□□□□ -0.51
COL1A1-210ENST00000504289 GIGYF2Q6Y7W6 1299 aaKnown RBP11.86□□□□□ -0.51
COL1A1-210ENST00000504289 AK7Q96M32 723 aa11.86□□□□□ -0.51
COL1A1-210ENST00000504289 RBM42Q9BTD8 480 aaKnown RBP11.86□□□□□ -0.51
COL1A1-210ENST00000504289 TM6SF1Q9BZW5 370 aa11.86□□□□□ -0.51
COL1A1-210ENST00000504289 LSG1Q9H089 658 aaKnown RBP11.86□□□□□ -0.51
COL1A1-210ENST00000504289 ASAP1Q9ULH1 1129 aa11.86□□□□□ -0.51
COL1A1-210ENST00000504289 FPGT-TNNI3KV9GXZ4 949 aa11.86□□□□□ -0.51
COL1A1-210ENST00000504289 SLIT2O94813 1529 aa11.86□□□□□ -0.51
COL1A1-210ENST00000504289 SPATA31A5Q5VU36 1347 aa11.86□□□□□ -0.51
COL1A1-210ENST00000504289 SPATA31A7Q8IWB4 1347 aa11.86□□□□□ -0.51
COL1A1-210ENST00000504289 RGL2O15211 777 aa11.85□□□□□ -0.51
COL1A1-210ENST00000504289 CD2BP2O95400 341 aaKnown RBP11.85□□□□□ -0.51
COL1A1-210ENST00000504289 CYP19A1P11511 503 aaPredicted RBP11.85□□□□□ -0.51
COL1A1-210ENST00000504289 CUL4AQ13619 759 aa11.85□□□□□ -0.51
COL1A1-210ENST00000504289 SKOR2Q2VWA4 1001 aaPredicted RBP11.85□□□□□ -0.51
COL1A1-210ENST00000504289 DNAJC10Q8IXB1 793 aa11.85□□□□□ -0.51
COL1A1-210ENST00000504289 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL1A1-210ENST00000504289 TJP1Q07157 1748 aa11.85□□□□□ -0.51
COL1A1-210ENST00000504289 EYA2O00167 538 aa11.84□□□□□ -0.51
COL1A1-210ENST00000504289 CSF1RP07333 972 aa11.84□□□□□ -0.51
COL1A1-210ENST00000504289 HSP90B1P14625 803 aaKnown RBP11.84□□□□□ -0.51
COL1A1-210ENST00000504289 NEK4P51957 841 aa11.84□□□□□ -0.51
COL1A1-210ENST00000504289 DDB1Q16531 1140 aa11.84□□□□□ -0.51
COL1A1-210ENST00000504289 ZBTB38Q8NAP3 1195 aaPredicted RBP11.84□□□□□ -0.51
COL1A1-210ENST00000504289 SMARCC1Q92922 1105 aaPredicted RBP11.84□□□□□ -0.51
COL1A1-210ENST00000504289 GOLGA6L22H0YM25 854 aa11.83□□□□□ -0.52
COL1A1-210ENST00000504289 PDIA4P13667 645 aaKnown RBP11.83□□□□□ -0.52
COL1A1-210ENST00000504289 PIP4K2AP48426 406 aaPredicted RBP11.83□□□□□ -0.52
COL1A1-210ENST00000504289 SIL1Q9H173 461 aa11.83□□□□□ -0.52
COL1A1-210ENST00000504289 ZBTB3Q9H5J0 574 aa11.83□□□□□ -0.52
COL1A1-210ENST00000504289 AKAP2Q9Y2D5 859 aa11.83□□□□□ -0.52
COL1A1-210ENST00000504289 ABCC12Q96J65 1359 aa11.82□□□□□ -0.52
COL1A1-210ENST00000504289 ZNF831Q5JPB2 1677 aa11.82□□□□□ -0.52
COL1A1-210ENST00000504289 SPEF2Q9C093 1822 aa11.82□□□□□ -0.52
COL1A1-210ENST00000504289 ZKSCAN1P17029 563 aaPredicted RBP11.82□□□□□ -0.52
COL1A1-210ENST00000504289 TFCP2Q12800 502 aa11.82□□□□□ -0.52
COL1A1-210ENST00000504289 LRRFIP1Q32MZ4 808 aaKnown RBP11.82□□□□□ -0.52
COL1A1-210ENST00000504289 RNF20Q5VTR2 975 aa11.82□□□□□ -0.52
COL1A1-210ENST00000504289 CWC27Q6UX04 472 aaKnown RBP11.82□□□□□ -0.52
COL1A1-210ENST00000504289 ATG9AQ7Z3C6 839 aa11.82□□□□□ -0.52
COL1A1-210ENST00000504289 SPRYD3Q8NCJ5 442 aa11.82□□□□□ -0.52
COL1A1-210ENST00000504289 MAP4K1Q92918 833 aa11.82□□□□□ -0.52
COL1A1-210ENST00000504289 TNPO1Q92973 898 aaKnown RBP11.82□□□□□ -0.52
COL1A1-210ENST00000504289 HAUS7Q99871 368 aa11.82□□□□□ -0.52
COL1A1-210ENST00000504289 CCDC8Q9H0W5 538 aaPredicted RBP11.82□□□□□ -0.52
COL1A1-210ENST00000504289 HMG20BQ9P0W2 317 aa11.82□□□□□ -0.52
COL1A1-210ENST00000504289 DBNLQ9UJU6 430 aaKnown RBP11.82□□□□□ -0.52
COL1A1-210ENST00000504289 ISY1Q9ULR0 285 aaKnown RBP11.82□□□□□ -0.52
COL1A1-210ENST00000504289 CCDC171Q6TFL3 1326 aa11.82□□□□□ -0.52
COL1A1-210ENST00000504289 JCADQ9P266 1359 aa11.81□□□□□ -0.52
COL1A1-210ENST00000504289 CYP2E1P05181 493 aaPredicted RBP11.81□□□□□ -0.52
COL1A1-210ENST00000504289 CCDC57Q2TAC2 916 aa11.81□□□□□ -0.52
COL1A1-210ENST00000504289 TSGA10IPQ3SY00 556 aa11.81□□□□□ -0.52
COL1A1-210ENST00000504289 TMX3Q96JJ7 454 aa11.81□□□□□ -0.52
COL1A1-210ENST00000504289 ALDH8A1Q9H2A2 487 aaPredicted RBP11.81□□□□□ -0.52
COL1A1-210ENST00000504289 SNX14Q9Y5W7 946 aa11.81□□□□□ -0.52
COL1A1-210ENST00000504289 PSMA5P28066 241 aa11.8□□□□□ -0.52
COL1A1-210ENST00000504289 PRIM1P49642 420 aaKnown RBP11.8□□□□□ -0.52
COL1A1-210ENST00000504289 NECTIN1Q15223 517 aa11.8□□□□□ -0.52
COL1A1-210ENST00000504289 NLRP10Q86W26 655 aa11.8□□□□□ -0.52
COL1A1-210ENST00000504289 ZSCAN31Q96LW9 406 aaPredicted RBP11.8□□□□□ -0.52
COL1A1-210ENST00000504289 FSD1Q9BTV5 496 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms